>gb|AC155253.1| Mus musculus BAC clone RP24-172G9 from 17, complete sequence
          Length = 160193

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 365   acacaatccatcttgaggaatgtc 388
             ||||||||||||||||||||||||
Sbjct: 39893 acacaatccatcttgaggaatgtc 39870

>gb|AC174800.2| Mus musculus BAC clone CH36-125B10 from chromosome 17, complete
             sequence
          Length = 178741

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 365   acacaatccatcttgaggaatgtc 388
             ||||||||||||||||||||||||
Sbjct: 69317 acacaatccatcttgaggaatgtc 69294

>emb|BX957314.11| Zebrafish DNA sequence from clone CH211-114K5 in linkage group 16,
             complete sequence
          Length = 90695

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 66    acaacttataacaacataaaca 87
             ||||||||||||||||||||||
Sbjct: 67545 acaacttataacaacataaaca 67524

>gb|AC118708.4| Mus musculus chromosome 7, clone RP24-118K11, complete sequence
          Length = 212638

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     aacaacataaacagaaagaa 94
              ||||||||||||||||||||
Sbjct: 125744 aacaacataaacagaaagaa 125725

>gb|AC161230.10| Mus musculus chromosome 1, clone RP24-160I3, complete sequence
          Length = 141358

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    cataaacagaaagaacatgg 99
             ||||||||||||||||||||
Sbjct: 54277 cataaacagaaagaacatgg 54258

>gb|AC157560.3| Mus musculus chromosome 15, clone RP24-270I3, complete sequence
          Length = 157844

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 90   aagaacatggcatgtacatccatc 113
            ||||||||| ||||||||||||||
Sbjct: 9047 aagaacatgtcatgtacatccatc 9070

>gb|AC164649.4| Mus musculus BAC clone RP23-437D10 from chromosome 5, complete sequence
          Length = 215766

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 171    caaagccttttgaagcctct 190
              ||||||||||||||||||||
Sbjct: 161177 caaagccttttgaagcctct 161158

>gb|AC140042.19| Mus musculus chromosome 5, clone RP23-437D10, complete sequence
          Length = 215786

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 171   caaagccttttgaagcctct 190
             ||||||||||||||||||||
Sbjct: 54590 caaagccttttgaagcctct 54609

>gb|AC113001.9| Mus musculus chromosome 7, clone RP23-184M4, complete sequence
          Length = 206940

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 352   ccacctccatttgacacaat 371
             ||||||||||||||||||||
Sbjct: 50893 ccacctccatttgacacaat 50874

>gb|AC114987.10| Mus musculus chromosome 3, clone RP23-81D7, complete sequence
          Length = 179717

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    acaacttataacaacataaa 85
             ||||||||||||||||||||
Sbjct: 33109 acaacttataacaacataaa 33128

>gb|AC116685.9| Mus musculus chromosome 1, clone RP23-304F24, complete sequence
          Length = 173726

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    ataacaacataaacagaaag 92
             ||||||||||||||||||||
Sbjct: 43424 ataacaacataaacagaaag 43443

>gb|AC006000.3| Homo sapiens PAC clone RP4-741M6 from 7, complete sequence
          Length = 124170

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   ctgtatgtttttctactagt 222
             ||||||||||||||||||||
Sbjct: 47498 ctgtatgtttttctactagt 47479

>gb|AC107859.7| Mus musculus chromosome 15, clone RP23-19C9, complete sequence
          Length = 208355

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 90    aagaacatggcatgtacatccatc 113
             ||||||||| ||||||||||||||
Sbjct: 71287 aagaacatgtcatgtacatccatc 71264

>gb|CP000107.1| Ehrlichia canis str. Jake, complete genome
          Length = 1315030

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 61     caaatacaacttataacaacataa 84
              ||||||||||||||| ||||||||
Sbjct: 762645 caaatacaacttatatcaacataa 762668

>emb|AL590005.6| Human DNA sequence from clone RP11-513F12 on chromosome 6 Contains part
             of the BPAG1 gene for bullous pemphigoid antigen 1
             (230/240kD), complete sequence
          Length = 101658

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   atgtttttctactagtagct 226
             ||||||||||||||||||||
Sbjct: 78149 atgtttttctactagtagct 78130

>emb|CR387927.9| Zebrafish DNA sequence from clone CH211-260P11 in linkage group 14,
             complete sequence
          Length = 149672

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    aacagaaagaacatggcatg 103
             ||||||||||||||||||||
Sbjct: 27623 aacagaaagaacatggcatg 27642

>gb|AC111120.12| Mus musculus chromosome 7, clone RP23-225M4, complete sequence
          Length = 151727

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    ataaacagaaagaacatggc 100
             ||||||||||||||||||||
Sbjct: 51721 ataaacagaaagaacatggc 51702

>dbj|AK015048.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930402F11 product:unclassifiable, full
           insert sequence
          Length = 1002

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 75  aacaacataaacagaaagaa 94
           ||||||||||||||||||||
Sbjct: 575 aacaacataaacagaaagaa 556

>emb|BX248319.5| Zebrafish DNA sequence from clone CH211-218O3 in linkage group 8,
             complete sequence
          Length = 193173

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    tacaacttataacaacataa 84
             ||||||||||||||||||||
Sbjct: 64024 tacaacttataacaacataa 64043

>emb|AL954868.6| Zebrafish DNA sequence from clone CH211-254N4 in linkage group 8,
            complete sequence
          Length = 194224

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 65   tacaacttataacaacataa 84
            ||||||||||||||||||||
Sbjct: 3166 tacaacttataacaacataa 3147

>gb|AC158748.9| Mus musculus chromosome 7, clone RP23-239H14, complete sequence
          Length = 167144

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 81   ataaacagaaagaacatggc 100
            ||||||||||||||||||||
Sbjct: 9171 ataaacagaaagaacatggc 9190

>gb|AC132149.4| Mus musculus BAC clone RP23-10H23 from 3, complete sequence
          Length = 217329

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    acaacttataacaacataaa 85
             ||||||||||||||||||||
Sbjct: 33871 acaacttataacaacataaa 33852


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,673,568
Number of Sequences: 3902068
Number of extensions: 3673568
Number of successful extensions: 70601
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70559
Number of HSP's gapped (non-prelim): 42
length of query: 418
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 396
effective length of database: 17,147,199,772
effective search space: 6790291109712
effective search space used: 6790291109712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)