>ref|XM_472429.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2634

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 257  tcctgtcttctgaaaaacagcgtccggtcgaccgccgagagcaggcagaca 307
            ||||| |||||||| | ||||  |||||||||||||| |||||| ||||||
Sbjct: 2624 tcctgccttctgaagagcagcacccggtcgaccgccgtgagcagacagaca 2574

>emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16,
             complete sequence
          Length = 114051

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                
Query: 257   tcctgtcttctgaaaaacagcgtccggtcgaccgccgagagcaggcagaca 307
             ||||| |||||||| | ||||  |||||||||||||| |||||| ||||||
Sbjct: 14326 tcctgccttctgaagagcagcacccggtcgaccgccgtgagcagacagaca 14276

>emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991214_12,
             complete sequence
          Length = 116952

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                
Query: 257   tcctgtcttctgaaaaacagcgtccggtcgaccgccgagagcaggcagaca 307
             ||||| |||||||| | ||||  |||||||||||||| |||||| ||||||
Sbjct: 90620 tcctgccttctgaagagcagcacccggtcgaccgccgtgagcagacagaca 90570

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                   
Query: 257      tcctgtcttctgaaaaacagcgtccggtcgaccgccgagagcaggcagaca 307
                ||||| |||||||| | ||||  |||||||||||||| |||||| ||||||
Sbjct: 20579992 tcctgccttctgaagagcagcacccggtcgaccgccgtgagcagacagaca 20579942

>dbj|AK109870.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-A10, full
            insert sequence
          Length = 2048

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 257  tcctgtcttctgaaaaacagcgtccggtcgaccgccgagagcaggcagaca 307
            ||||| |||||||| | ||||  |||||||||||||| |||||| ||||||
Sbjct: 1820 tcctgccttctgaagagcagcacccggtcgaccgccgtgagcagacagaca 1770

>gb|AC149809.10| Medicago truncatula clone mth2-154h8, complete sequence
          Length = 98053

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 17    aaacacattgatatcaccagaacaaa 42
             ||||||||||||||||||| ||||||
Sbjct: 75753 aaacacattgatatcaccaaaacaaa 75728

>emb|CR769769.7| Zebrafish DNA sequence from clone CH211-190H11 in linkage group 11,
              complete sequence
          Length = 160246

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 94     atcccaaaaaccaaaccacaaa 115
              ||||||||||||||||||||||
Sbjct: 136333 atcccaaaaaccaaaccacaaa 136312

>emb|BX001059.6| Zebrafish DNA sequence from clone CH211-14L11, complete sequence
          Length = 80440

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 94    atcccaaaaaccaaaccacaaa 115
             ||||||||||||||||||||||
Sbjct: 61415 atcccaaaaaccaaaccacaaa 61436

>emb|AL645791.14| Mouse DNA sequence from clone RP23-465A12 on chromosome 11, complete
              sequence
          Length = 200883

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 233    atgtgcatgcacaatcacaag 253
              |||||||||||||||||||||
Sbjct: 103969 atgtgcatgcacaatcacaag 103949

>gb|AC044805.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-282L6, complete
              sequence
          Length = 208526

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 227    tccttcatgtgcatgcacaa 246
              ||||||||||||||||||||
Sbjct: 124289 tccttcatgtgcatgcacaa 124270

>gb|AC140398.2| Mus musculus BAC clone RP23-162P5 from chromosome 5, complete sequence
          Length = 200640

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 218   atgcatggatccttcatgtg 237
             ||||||||||||||||||||
Sbjct: 97537 atgcatggatccttcatgtg 97556

>gb|AC125039.4| Mus musculus BAC clone RP23-335C3 from chromosome 6, complete sequence
          Length = 222535

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   gaagaaataaacggaaagaa 152
             ||||||||||||||||||||
Sbjct: 10152 gaagaaataaacggaaagaa 10171

>gb|AC087343.4| Homo sapiens chromosome 8, clone RP11-734J24, complete sequence
          Length = 54346

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    accagaacaaatttacagca 51
             ||||||||||||||||||||
Sbjct: 50128 accagaacaaatttacagca 50147

>gb|AC155228.11| Medicago truncatula clone mth2-139i19, complete sequence
          Length = 112322

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 25    tgatatcaccagaacaaatttaca 48
             ||||||||||| ||||||||||||
Sbjct: 10031 tgatatcaccaaaacaaatttaca 10054

>gb|AC087170.6| Homo sapiens chromosome 8, clone RP11-258J10, complete sequence
          Length = 172443

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     accagaacaaatttacagca 51
              ||||||||||||||||||||
Sbjct: 167163 accagaacaaatttacagca 167144

>gb|AC148659.1| Macaca mulatta Major Histocompatibility Complex BAC MMU005H07, complete
             sequence
          Length = 174766

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    cccaaaaaccaaaccacaaa 115
             ||||||||||||||||||||
Sbjct: 30991 cccaaaaaccaaaccacaaa 30972

>gb|AC154002.8| Mus musculus 6 BAC RP24-239G21 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 188768

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 133    gaagaaataaacggaaagaa 152
              ||||||||||||||||||||
Sbjct: 127055 gaagaaataaacggaaagaa 127074

>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds
          Length = 3284914

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 96      cccaaaaaccaaaccacaaa 115
               ||||||||||||||||||||
Sbjct: 1854529 cccaaaaaccaaaccacaaa 1854548

>gb|AC016888.23| Homo sapiens chromosome 17, clone RP11-452I5, complete sequence
          Length = 163597

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 252    agtcctcctgtcttctgaaaaaca 275
              |||||||||| |||||||||||||
Sbjct: 113992 agtcctcctgccttctgaaaaaca 114015

>gb|AC148992.3| Mus musculus BAC clone RP24-337C15 from 10, complete sequence
          Length = 164586

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    ctccatttaatatgccattg 72
             ||||||||||||||||||||
Sbjct: 86123 ctccatttaatatgccattg 86142

>gb|AC160641.2| Ornithorhynchus anatinus BAC clone OABb-469P24 from chromosome unknown,
             complete sequence
          Length = 128941

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 93    tatcccaaaaaccaaaccacaaag 116
             ||||||||||||||||||| ||||
Sbjct: 88016 tatcccaaaaaccaaaccagaaag 88039

>gb|AC151474.2| Mus musculus BAC clone RP23-338P12 from 5, complete sequence
          Length = 226403

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 218    atgcatggatccttcatgtg 237
              ||||||||||||||||||||
Sbjct: 219648 atgcatggatccttcatgtg 219667


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,266,769
Number of Sequences: 3902068
Number of extensions: 3266769
Number of successful extensions: 67379
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67312
Number of HSP's gapped (non-prelim): 67
length of query: 334
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 312
effective length of database: 17,147,199,772
effective search space: 5349926328864
effective search space used: 5349926328864
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)