Clone Name | rbastl13c05 |
---|---|
Clone Library Name | barley_pub |
>gb|AY483155.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA6) mRNA, complete cds Length = 3745 Score = 299 bits (151), Expect = 3e-78 Identities = 238/268 (88%), Gaps = 8/268 (2%) Strand = Plus / Minus Query: 73 tccgtcttcatctacaacaacaaaatcccatccaaccccctccggtatttacacgagggg 132 |||||||||||||||||| | |||||||| || ||||||||||||||||||||| ||||| Sbjct: 3518 tccgtcttcatctacaaccaaaaaatcccgtctaaccccctccggtatttacactagggg 3459 Query: 133 ggcagatactcttcggcgccgat--------cagcagtcgacgccacactgccccatggc 184 ||||||||||| |||||||| ||||||| |||||| |||||||||||||| Sbjct: 3458 ggcagatactcccgagcgccgatgatccgatcagcagttgacgccgcactgccccatggc 3399 Query: 185 gacggctttctgggtatcggatatgaaagggtcgatcttcacccacaggagggaaaagat 244 ||||| |||||||||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 3398 aacggccttctgggtatcggaaatgaaagggtcgatcttcacccagaggagggagaagat 3339 Query: 245 ggaggctaggaggatggaccaaacaatgacgatggttggcgtgcggttctgcttccccat 304 |||||| |||||||| |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 3338 ggaggcgaggaggatcgaccaaacgatgacgatggtcggcgtgcggttctgcttccccat 3279 Query: 305 gaaacccttggggaaggggtagagatgg 332 || ||||||| ||||||||||||||||| Sbjct: 3278 gagacccttgaggaaggggtagagatgg 3251
>gb|DQ020207.1| Bambusa oldhamii cellulose synthase BoCesA1a mRNA, complete cds Length = 3547 Score = 212 bits (107), Expect = 5e-52 Identities = 161/179 (89%) Strand = Plus / Minus Query: 154 atcagcagtcgacgccacactgccccatggcgacggctttctgggtatcggatatgaaag 213 ||||||||| || || |||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 3254 atcagcagttcacaccgcactgccccaaggcgacggctttctgggtaggggatatgaaag 3195 Query: 214 ggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaaacaatga 273 |||||||||||||||| |||||||| ||||| || || ||||||||||||||||| |||| Sbjct: 3194 ggtcgatcttcacccagaggagggagaagattgacgcaaggaggatggaccaaacgatga 3135 Query: 274 cgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggtagagatgg 332 | ||||||||||||||||||||| | ||||||| ||||||| ||||||||||||||||| Sbjct: 3134 caatggttggcgtgcggttctgcctgcccatgagacccttgaggaaggggtagagatgg 3076 Score = 79.8 bits (40), Expect = 5e-12 Identities = 50/52 (96%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 77 tcttcatctacaacaacaaaatcccatccaaccccctccggtatttacacga 128 |||||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 3351 tcttcatctacaacaa-aaaatcccatccaaccccctcaggtatttacacga 3301
>gb|DQ020208.1| Bambusa oldhamii cellulose synthase BoCesA1b mRNA, complete cds Length = 3453 Score = 204 bits (103), Expect = 1e-49 Identities = 163/183 (89%) Strand = Plus / Minus Query: 150 gccgatcagcagtcgacgccacactgccccatggcgacggctttctgggtatcggatatg 209 |||||| |||||| || || |||||||||| ||| ||||||||||| ||| ||||||| Sbjct: 3415 gccgattagcagttcacaccgcactgccccaaggcaacggctttctgagtaggggatatg 3356 Query: 210 aaagggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaaaca 269 ||||||||||||||||||||||| ||||| ||||| || || |||||||||||||||||| Sbjct: 3355 aaagggtcgatcttcacccacagcagggagaagattgacgcgaggaggatggaccaaaca 3296 Query: 270 atgacgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggtagaga 329 ||||| ||||||||||||||||||||| | ||||||| ||||||| |||||||||||||| Sbjct: 3295 atgacaatggttggcgtgcggttctgcctgcccatgagacccttgaggaaggggtagaga 3236 Query: 330 tgg 332 ||| Sbjct: 3235 tgg 3233
>gb|DQ020210.1| Bambusa oldhamii cellulose synthase BoCesA3a mRNA, complete cds Length = 3571 Score = 163 bits (82), Expect = 4e-37 Identities = 142/162 (87%) Strand = Plus / Minus Query: 171 cactgccccatggcgacggctttctgggtatcggatatgaaagggtcgatcttcacccac 230 |||||||||| || |||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 3288 cactgccccagggtgacggctttctgggtaggagatatgaaaggatcgatcttcacccac 3229 Query: 231 aggagggaaaagatggaggctaggaggatggaccaaacaatgacgatggttggcgtgcgg 290 || || || |||||||| || ||||||||||||||||||||||| |||||||| |||||| Sbjct: 3228 agcagtgagaagatggaagcaaggaggatggaccaaacaatgacaatggttggagtgcgg 3169 Query: 291 ttctgcttccccatgaaacccttggggaaggggtagagatgg 332 ||||| ||||||||| |||||| |||| ||||| |||||| Sbjct: 3168 ttctgtctccccatgagaccctttaggaaagggtaaagatgg 3127
>gb|AF200526.1|AF200526 Zea mays cellulose synthase-2 (CesA-2) mRNA, complete cds Length = 3725 Score = 159 bits (80), Expect = 7e-36 Identities = 155/180 (86%) Strand = Plus / Minus Query: 153 gatcagcagtcgacgccacactgccccatggcgacggctttctgggtatcggatatgaaa 212 |||||||||| || ||||| ||||||| |||| | |||||||| || ||| |||||| Sbjct: 3405 gatcagcagttcacaccacattgccccaaggcggcagctttctgtgtcggggagatgaaa 3346 Query: 213 gggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaaacaatg 272 || ||||||||||||||||| | ||| ||||| || || ||||||||||||||||| ||| Sbjct: 3345 ggatcgatcttcacccacagcaaggagaagatagacgcaaggaggatggaccaaacgatg 3286 Query: 273 acgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggtagagatgg 332 ||||| |||||||||||||||||| | ||||||| ||||||| ||||||||||||||||| Sbjct: 3285 acgattgttggcgtgcggttctgcctgcccatgagacccttgaggaaggggtagagatgg 3226 Score = 67.9 bits (34), Expect = 2e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 80 tcatctacaacaacaaaatcccatccaaccccctccggtatttacacgaggggg 133 ||||||||||||| ||| ||||||| | ||||||| |||||||||||||||||| Sbjct: 3501 tcatctacaacaaaaaattcccatctagccccctcaggtatttacacgaggggg 3448
>gb|AF200525.1|AF200525 Zea mays cellulose synthase-1 (CesA-1) mRNA, complete cds Length = 3752 Score = 153 bits (77), Expect = 4e-34 Identities = 155/181 (85%) Strand = Plus / Minus Query: 152 cgatcagcagtcgacgccacactgccccatggcgacggctttctgggtatcggatatgaa 211 ||||||||||| ||||||||| ||||||| ||| | |||||||| || ||| ||||| Sbjct: 3413 cgatcagcagttgacgccacattgccccaaggcagcagctttctgtgtcggggagatgaa 3354 Query: 212 agggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaaacaat 271 ||| ||||||||||||||||| | ||| ||||| || || || ||||||||||| ||||| Sbjct: 3353 aggatcgatcttcacccacagcaaggagaagatagatgcaagaaggatggaccagacaat 3294 Query: 272 gacgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggtagagatg 331 |||||| ||||| |||||||||||| | ||||||| ||||||| |||||||||||||||| Sbjct: 3293 gacgattgttggtgtgcggttctgccttcccatgagacccttgaggaaggggtagagatg 3234 Query: 332 g 332 | Sbjct: 3233 g 3233 Score = 40.1 bits (20), Expect = 4.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 98 tcccatccaaccccctccggtatttacacgaggggg 133 ||||||| | || |||| |||||||||||||||||| Sbjct: 3489 tcccatctagcctcctcaggtatttacacgaggggg 3454
>gb|AC135426.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617A08, complete sequence Length = 144781 Score = 149 bits (75), Expect = 7e-33 Identities = 156/183 (85%) Strand = Plus / Plus Query: 150 gccgatcagcagtcgacgccacactgccccatggcgacggctttctgggtatcggatatg 209 ||||||||||||| || || || ||||||| ||||||||||||||| ||| || ||| Sbjct: 128286 gccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatg 128345 Query: 210 aaagggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaaaca 269 ||||| |||||||| |||||||| ||||| ||||| || || |||||||| ||||| || Sbjct: 128346 aaaggatcgatcttgacccacagaagggagaagatcgacgcgaggaggatcgaccagacg 128405 Query: 270 atgacgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggtagaga 329 ||||||||||| || |||||||||||| | ||||||| ||||||| |||||||||||||| Sbjct: 128406 atgacgatggtcggagtgcggttctgcctgcccatgagacccttgaggaaggggtagaga 128465 Query: 330 tgg 332 ||| Sbjct: 128466 tgg 128468
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 149 bits (75), Expect = 7e-33 Identities = 156/183 (85%) Strand = Plus / Plus Query: 150 gccgatcagcagtcgacgccacactgccccatggcgacggctttctgggtatcggatatg 209 ||||||||||||| || || || ||||||| ||||||||||||||| ||| || ||| Sbjct: 17129 gccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatg 17188 Query: 210 aaagggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaaaca 269 ||||| |||||||| |||||||| ||||| ||||| || || |||||||| ||||| || Sbjct: 17189 aaaggatcgatcttgacccacagaagggagaagatcgacgcgaggaggatcgaccagacg 17248 Query: 270 atgacgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggtagaga 329 ||||||||||| || |||||||||||| | ||||||| ||||||| |||||||||||||| Sbjct: 17249 atgacgatggtcggagtgcggttctgcctgcccatgagacccttgaggaaggggtagaga 17308 Query: 330 tgg 332 ||| Sbjct: 17309 tgg 17311
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 149 bits (75), Expect = 7e-33 Identities = 156/183 (85%) Strand = Plus / Plus Query: 150 gccgatcagcagtcgacgccacactgccccatggcgacggctttctgggtatcggatatg 209 ||||||||||||| || || || ||||||| ||||||||||||||| ||| || ||| Sbjct: 4506662 gccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatg 4506721 Query: 210 aaagggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaaaca 269 ||||| |||||||| |||||||| ||||| ||||| || || |||||||| ||||| || Sbjct: 4506722 aaaggatcgatcttgacccacagaagggagaagatcgacgcgaggaggatcgaccagacg 4506781 Query: 270 atgacgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggtagaga 329 ||||||||||| || |||||||||||| | ||||||| ||||||| |||||||||||||| Sbjct: 4506782 atgacgatggtcggagtgcggttctgcctgcccatgagacccttgaggaaggggtagaga 4506841 Query: 330 tgg 332 ||| Sbjct: 4506842 tgg 4506844
>dbj|AK102140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085K01, full insert sequence Length = 3768 Score = 149 bits (75), Expect = 7e-33 Identities = 156/183 (85%) Strand = Plus / Minus Query: 150 gccgatcagcagtcgacgccacactgccccatggcgacggctttctgggtatcggatatg 209 ||||||||||||| || || || ||||||| ||||||||||||||| ||| || ||| Sbjct: 3422 gccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatg 3363 Query: 210 aaagggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaaaca 269 ||||| |||||||| |||||||| ||||| ||||| || || |||||||| ||||| || Sbjct: 3362 aaaggatcgatcttgacccacagaagggagaagatcgacgcgaggaggatcgaccagacg 3303 Query: 270 atgacgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggtagaga 329 ||||||||||| || |||||||||||| | ||||||| ||||||| |||||||||||||| Sbjct: 3302 atgacgatggtcggagtgcggttctgcctgcccatgagacccttgaggaaggggtagaga 3243 Query: 330 tgg 332 ||| Sbjct: 3242 tgg 3240
>dbj|AK100188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034D20, full insert sequence Length = 3897 Score = 149 bits (75), Expect = 7e-33 Identities = 156/183 (85%) Strand = Plus / Minus Query: 150 gccgatcagcagtcgacgccacactgccccatggcgacggctttctgggtatcggatatg 209 ||||||||||||| || || || ||||||| ||||||||||||||| ||| || ||| Sbjct: 3422 gccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatg 3363 Query: 210 aaagggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaaaca 269 ||||| |||||||| |||||||| ||||| ||||| || || |||||||| ||||| || Sbjct: 3362 aaaggatcgatcttgacccacagaagggagaagatcgacgcgaggaggatcgaccagacg 3303 Query: 270 atgacgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggtagaga 329 ||||||||||| || |||||||||||| | ||||||| ||||||| |||||||||||||| Sbjct: 3302 atgacgatggtcggagtgcggttctgcctgcccatgagacccttgaggaaggggtagaga 3243 Query: 330 tgg 332 ||| Sbjct: 3242 tgg 3240
>dbj|AK099281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125F05, full insert sequence Length = 3801 Score = 149 bits (75), Expect = 7e-33 Identities = 156/183 (85%) Strand = Plus / Minus Query: 150 gccgatcagcagtcgacgccacactgccccatggcgacggctttctgggtatcggatatg 209 ||||||||||||| || || || ||||||| ||||||||||||||| ||| || ||| Sbjct: 3422 gccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatg 3363 Query: 210 aaagggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaaaca 269 ||||| |||||||| |||||||| ||||| ||||| || || |||||||| ||||| || Sbjct: 3362 aaaggatcgatcttgacccacagaagggagaagatcgacgcgaggaggatcgaccagacg 3303 Query: 270 atgacgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggtagaga 329 ||||||||||| || |||||||||||| | ||||||| ||||||| |||||||||||||| Sbjct: 3302 atgacgatggtcggagtgcggttctgcctgcccatgagacccttgaggaaggggtagaga 3243 Query: 330 tgg 332 ||| Sbjct: 3242 tgg 3240
>dbj|AK099228.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091P03, full insert sequence Length = 3732 Score = 149 bits (75), Expect = 7e-33 Identities = 156/183 (85%) Strand = Plus / Minus Query: 150 gccgatcagcagtcgacgccacactgccccatggcgacggctttctgggtatcggatatg 209 ||||||||||||| || || || ||||||| ||||||||||||||| ||| || ||| Sbjct: 3422 gccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatg 3363 Query: 210 aaagggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaaaca 269 ||||| |||||||| |||||||| ||||| ||||| || || |||||||| ||||| || Sbjct: 3362 aaaggatcgatcttgacccacagaagggagaagatcgacgcgaggaggatcgaccagacg 3303 Query: 270 atgacgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggtagaga 329 ||||||||||| || |||||||||||| | ||||||| ||||||| |||||||||||||| Sbjct: 3302 atgacgatggtcggagtgcggttctgcctgcccatgagacccttgaggaaggggtagaga 3243 Query: 330 tgg 332 ||| Sbjct: 3242 tgg 3240
>dbj|AK098978.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092B06, full insert sequence Length = 3764 Score = 149 bits (75), Expect = 7e-33 Identities = 156/183 (85%) Strand = Plus / Minus Query: 150 gccgatcagcagtcgacgccacactgccccatggcgacggctttctgggtatcggatatg 209 ||||||||||||| || || || ||||||| ||||||||||||||| ||| || ||| Sbjct: 3422 gccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatg 3363 Query: 210 aaagggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaaaca 269 ||||| |||||||| |||||||| ||||| ||||| || || |||||||| ||||| || Sbjct: 3362 aaaggatcgatcttgacccacagaagggagaagatcgacgcgaggaggatcgaccagacg 3303 Query: 270 atgacgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggtagaga 329 ||||||||||| || |||||||||||| | ||||||| ||||||| |||||||||||||| Sbjct: 3302 atgacgatggtcggagtgcggttctgcctgcccatgagacccttgaggaaggggtagaga 3243 Query: 330 tgg 332 ||| Sbjct: 3242 tgg 3240
>dbj|AK067967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013125H24, full insert sequence Length = 3802 Score = 149 bits (75), Expect = 7e-33 Identities = 156/183 (85%) Strand = Plus / Minus Query: 150 gccgatcagcagtcgacgccacactgccccatggcgacggctttctgggtatcggatatg 209 ||||||||||||| || || || ||||||| ||||||||||||||| ||| || ||| Sbjct: 3422 gccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatg 3363 Query: 210 aaagggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaaaca 269 ||||| |||||||| |||||||| ||||| ||||| || || |||||||| ||||| || Sbjct: 3362 aaaggatcgatcttgacccacagaagggagaagatcgacgcgaggaggatcgaccagacg 3303 Query: 270 atgacgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggtagaga 329 ||||||||||| || |||||||||||| | ||||||| ||||||| |||||||||||||| Sbjct: 3302 atgacgatggtcggagtgcggttctgcctgcccatgagacccttgaggaaggggtagaga 3243 Query: 330 tgg 332 ||| Sbjct: 3242 tgg 3240
>dbj|AK060079.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-C08, full insert sequence Length = 1097 Score = 149 bits (75), Expect = 7e-33 Identities = 156/183 (85%) Strand = Plus / Minus Query: 150 gccgatcagcagtcgacgccacactgccccatggcgacggctttctgggtatcggatatg 209 ||||||||||||| || || || ||||||| ||||||||||||||| ||| || ||| Sbjct: 673 gccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatg 614 Query: 210 aaagggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaaaca 269 ||||| |||||||| |||||||| ||||| ||||| || || |||||||| ||||| || Sbjct: 613 aaaggatcgatcttgacccacagaagggagaagatcgacgcgaggaggatcgaccagacg 554 Query: 270 atgacgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggtagaga 329 ||||||||||| || |||||||||||| | ||||||| ||||||| |||||||||||||| Sbjct: 553 atgacgatggtcggagtgcggttctgcctgcccatgagacccttgaggaaggggtagaga 494 Query: 330 tgg 332 ||| Sbjct: 493 tgg 491
>dbj|AK060838.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D02, full insert sequence Length = 1426 Score = 143 bits (72), Expect = 4e-31 Identities = 153/180 (85%) Strand = Plus / Minus Query: 150 gccgatcagcagtcgacgccacactgccccatggcgacggctttctgggtatcggatatg 209 ||||||||||||| || || || ||||||| ||||||||||||||| ||| || ||| Sbjct: 1099 gccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatg 1040 Query: 210 aaagggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaaaca 269 ||||| |||||||| |||||||| ||||| ||||| || || |||||||| ||||| || Sbjct: 1039 aaaggatcgatcttgacccacagaagggagaagatcgacgcgaggaggatcgaccagacg 980 Query: 270 atgacgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggtagaga 329 ||||||||||| || |||||||||||| | ||||||| ||||||| |||||||||||||| Sbjct: 979 atgacgatggtcggagtgcggttctgcctgcccatgagacccttgaggaaggggtagaga 920
>gb|DQ020216.1| Bambusa oldhamii cellulose synthase BoCesA3b mRNA, complete cds Length = 3707 Score = 139 bits (70), Expect = 6e-30 Identities = 139/162 (85%) Strand = Plus / Minus Query: 171 cactgccccatggcgacggctttctgggtatcggatatgaaagggtcgatcttcacccac 230 |||||||||| || ||| |||||||||||| ||||||||||| ||||||||||||||| Sbjct: 3294 cactgccccagggtgacagctttctgggtaggagatatgaaaggatcgatcttcacccac 3235 Query: 231 aggagggaaaagatggaggctaggaggatggaccaaacaatgacgatggttggcgtgcgg 290 || || || |||||||| || ||||||| ||||||||||||||| |||||||| ||||| Sbjct: 3234 agcagtgagaagatggaagcaaggaggacggaccaaacaatgacaatggttggagtgcga 3175 Query: 291 ttctgcttccccatgaaacccttggggaaggggtagagatgg 332 ||||| ||||||||| |||||| |||| ||||| |||||| Sbjct: 3174 ttctgtctccccatgagaccctttaggaaagggtaaagatgg 3133
>gb|DQ020209.1| Bambusa oldhamii cellulose synthase BoCesA2 mRNA, complete cds Length = 3648 Score = 139 bits (70), Expect = 6e-30 Identities = 139/162 (85%) Strand = Plus / Minus Query: 171 cactgccccatggcgacggctttctgggtatcggatatgaaagggtcgatcttcacccac 230 |||||||||| ||| || |||||||||||| ||||||||||| ||||||||||||||| Sbjct: 3309 cactgccccaaggcaacagctttctgggtaggagatatgaaaggatcgatcttcacccac 3250 Query: 231 aggagggaaaagatggaggctaggaggatggaccaaacaatgacgatggttggcgtgcgg 290 || | || |||||||| || ||||||||||||||||||||||| || || || |||||| Sbjct: 3249 agcaacgagaagatggaagcaaggaggatggaccaaacaatgacaattgtcggtgtgcgg 3190 Query: 291 ttctgcttccccatgaaacccttggggaaggggtagagatgg 332 ||||| |||||||||| |||||| |||| ||||| |||||| Sbjct: 3189 ttctgtttccccatgagaccctttaggaaagggtaaagatgg 3148 Score = 56.0 bits (28), Expect = 7e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 91 aacaaaatcccatccaaccccctccggtatttacacgagggggg 134 ||||||||| |||| |||| |||| ||||||||||||||||||| Sbjct: 3420 aacaaaatcacatctaaccacctctggtatttacacgagggggg 3377
>gb|AY104236.1| Zea mays PCO121439 mRNA sequence Length = 2872 Score = 137 bits (69), Expect = 3e-29 Identities = 120/137 (87%) Strand = Plus / Minus Query: 192 ttctgggtatcggatatgaaagggtcgatcttcacccacaggagggaaaagatggaggct 251 ||||||||| ||||||||| |||||||||||||||||||| || || || ||||| || Sbjct: 2451 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 2392 Query: 252 aggaggatggaccaaacaatgacgatggttggcgtgcggttctgcttccccatgaaaccc 311 || |||| ||||||||||||||||||||| || |||||||||||||||||||||| |||| Sbjct: 2391 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 2332 Query: 312 ttggggaaggggtagag 328 || |||| |||||||| Sbjct: 2331 ttcaggaaagggtagag 2315
>gb|AF200527.1|AF200527 Zea mays cellulose synthase-3 (CesA-3) mRNA, partial cds Length = 2828 Score = 129 bits (65), Expect = 6e-27 Identities = 119/137 (86%) Strand = Plus / Minus Query: 192 ttctgggtatcggatatgaaagggtcgatcttcacccacaggagggaaaagatggaggct 251 ||||||||| ||||||||| |||||||||||||||||||| || || || ||||| || Sbjct: 2429 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 2370 Query: 252 aggaggatggaccaaacaatgacgatggttggcgtgcggttctgcttccccatgaaaccc 311 || |||| ||||||||| ||||||||||| || |||||||||||||||||||||| |||| Sbjct: 2369 agaaggacggaccaaacgatgacgatggtcggtgtgcggttctgcttccccatgagaccc 2310 Query: 312 ttggggaaggggtagag 328 || |||| |||||||| Sbjct: 2309 ttcaggaaagggtagag 2293
>gb|AY110415.1| Zea mays CL1166_1 mRNA sequence Length = 3898 Score = 129 bits (65), Expect = 6e-27 Identities = 152/181 (83%) Strand = Plus / Minus Query: 152 cgatcagcagtcgacgccacactgccccatggcgacggctttctgggtatcggatatgaa 211 ||||||||||| ||||||||| ||||||| ||| | |||||||| || ||| ||||| Sbjct: 3419 cgatcagcagttgacgccacattgccccaaggcagcagctttctgtgtcggggagatgaa 3360 Query: 212 agggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaaacaat 271 ||| ||||||||||||||||| | ||| ||||| || || || ||||||||||| ||||| Sbjct: 3359 aggatcgatcttcacccacagcaaggagaagatagatgcaagaaggatggaccagacaat 3300 Query: 272 gacgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggtagagatg 331 |||||| ||||| |||||||||||| | ||||||| ||||||| |||| | ||| ||||| Sbjct: 3299 gacgattgttggtgtgcggttctgccttcccatgagacccttgaggaacgtgtacagatg 3240 Query: 332 g 332 | Sbjct: 3239 g 3239
>gb|BT019010.1| Zea mays clone Contig501.F mRNA sequence Length = 1532 Score = 107 bits (54), Expect = 2e-20 Identities = 108/126 (85%) Strand = Plus / Minus Query: 207 atgaaagggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaa 266 |||||||| ||||||||| ||| | | | |||||| || || || || |||||||||| | Sbjct: 1034 atgaaaggatcgatcttccccccccgcaaggaaaaaatagatgcaagaaggatggaccca 975 Query: 267 acaatgacgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggtag 326 |||||||| || ||||| |||||||||||| | ||||||||||||||| ||||||||||| Sbjct: 974 acaatgaccattgttggggtgcggttctgccttcccatgaaacccttgaggaaggggtag 915 Query: 327 agatgg 332 |||||| Sbjct: 914 agatgg 909
>ref|NM_196933.1| Oryza sativa (japonica cultivar-group) putative cellulose synthase (OSJNBa0006L06.10), mRNA Length = 3408 Score = 99.6 bits (50), Expect = 5e-18 Identities = 104/122 (85%) Strand = Plus / Minus Query: 207 atgaaagggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaa 266 ||||| ||||||||| | ||||| | |||||| ||||||||||| |||||||||||||| Sbjct: 3143 atgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggaccag 3084 Query: 267 acaatgacgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggtag 326 | | ||| ||||| ||||| ||||||||| ||||||||| |||||| ||||||||||| Sbjct: 3083 agcacgacaatggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtag 3024 Query: 327 ag 328 || Sbjct: 3023 ag 3022
>gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 genomic sequence, complete sequence Length = 162339 Score = 99.6 bits (50), Expect = 5e-18 Identities = 104/122 (85%) Strand = Plus / Minus Query: 207 atgaaagggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaa 266 ||||| ||||||||| | ||||| | |||||| ||||||||||| |||||||||||||| Sbjct: 95863 atgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggaccag 95804 Query: 267 acaatgacgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggtag 326 | | ||| ||||| ||||| ||||||||| ||||||||| |||||| ||||||||||| Sbjct: 95803 agcacgacaatggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtag 95744 Query: 327 ag 328 || Sbjct: 95743 ag 95742
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 99.6 bits (50), Expect = 5e-18 Identities = 104/122 (85%) Strand = Plus / Minus Query: 207 atgaaagggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaa 266 ||||| ||||||||| | ||||| | |||||| ||||||||||| |||||||||||||| Sbjct: 16751346 atgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggaccag 16751287 Query: 267 acaatgacgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggtag 326 | | ||| ||||| ||||| ||||||||| ||||||||| |||||| ||||||||||| Sbjct: 16751286 agcacgacaatggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtag 16751227 Query: 327 ag 328 || Sbjct: 16751226 ag 16751225 Score = 40.1 bits (20), Expect = 4.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 300 cccatgaaacccttggggaaggggtagagatg 331 ||||||| ||||||| ||||||||||||||| Sbjct: 22545405 cccatgaggcccttggcgaaggggtagagatg 22545374
>dbj|AK120265.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047D23, full insert sequence Length = 612 Score = 99.6 bits (50), Expect = 5e-18 Identities = 104/122 (85%) Strand = Plus / Minus Query: 207 atgaaagggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaa 266 ||||| ||||||||| | ||||| | |||||| ||||||||||| |||||||||||||| Sbjct: 402 atgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggaccag 343 Query: 267 acaatgacgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggtag 326 | | ||| ||||| ||||| ||||||||| ||||||||| |||||| ||||||||||| Sbjct: 342 agcacgacaatggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtag 283 Query: 327 ag 328 || Sbjct: 282 ag 281
>dbj|AK072259.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009D02, full insert sequence Length = 3426 Score = 99.6 bits (50), Expect = 5e-18 Identities = 104/122 (85%) Strand = Plus / Minus Query: 207 atgaaagggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaa 266 ||||| ||||||||| | ||||| | |||||| ||||||||||| |||||||||||||| Sbjct: 3176 atgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggaccag 3117 Query: 267 acaatgacgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggtag 326 | | ||| ||||| ||||| ||||||||| ||||||||| |||||| ||||||||||| Sbjct: 3116 agcacgacaatggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtag 3057 Query: 327 ag 328 || Sbjct: 3056 ag 3055
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 99.6 bits (50), Expect = 5e-18 Identities = 104/122 (85%) Strand = Plus / Minus Query: 207 atgaaagggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaa 266 ||||| ||||||||| | ||||| | |||||| ||||||||||| |||||||||||||| Sbjct: 16760386 atgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggaccag 16760327 Query: 267 acaatgacgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggtag 326 | | ||| ||||| ||||| ||||||||| ||||||||| |||||| ||||||||||| Sbjct: 16760326 agcacgacaatggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtag 16760267 Query: 327 ag 328 || Sbjct: 16760266 ag 16760265 Score = 40.1 bits (20), Expect = 4.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 300 cccatgaaacccttggggaaggggtagagatg 331 ||||||| ||||||| ||||||||||||||| Sbjct: 22557873 cccatgaggcccttggcgaaggggtagagatg 22557842
>gb|BT019277.1| Zea mays clone Contig950.F mRNA sequence Length = 789 Score = 89.7 bits (45), Expect = 5e-15 Identities = 87/101 (86%) Strand = Plus / Plus Query: 225 acccacaggagggaaaagatggaggctaggaggatggaccaaacaatgacgatggttggc 284 ||||||| ||||||||||| || || |||||||| | ||| |||| ||| ||||| ||| Sbjct: 261 acccacatcagggaaaagatcgacgcaaggaggatagcccagacaacgacaatggtcggc 320 Query: 285 gtgcggttctgcttccccatgaaacccttggggaaggggta 325 |||||||||||||||||||||| |||||| |||||||||| Sbjct: 321 gtgcggttctgcttccccatgaggcccttgaggaaggggta 361
>gb|AF200529.1|AF200529 Zea mays cellulose synthase-5 (CesA-5) mRNA, complete cds Length = 3676 Score = 89.7 bits (45), Expect = 5e-15 Identities = 87/101 (86%) Strand = Plus / Minus Query: 225 acccacaggagggaaaagatggaggctaggaggatggaccaaacaatgacgatggttggc 284 ||||||| ||||||||||| || || |||||||| | ||| |||| ||| ||||| ||| Sbjct: 3417 acccacatcagggaaaagatcgacgcaaggaggatagcccagacaacgacaatggtcggc 3358 Query: 285 gtgcggttctgcttccccatgaaacccttggggaaggggta 325 |||||||||||||||||||||| |||||| |||||||||| Sbjct: 3357 gtgcggttctgcttccccatgaggcccttgaggaaggggta 3317
>gb|AY110079.1| Zea mays CL1164_1 mRNA sequence Length = 3696 Score = 89.7 bits (45), Expect = 5e-15 Identities = 87/101 (86%) Strand = Plus / Minus Query: 225 acccacaggagggaaaagatggaggctaggaggatggaccaaacaatgacgatggttggc 284 ||||||| ||||||||||| || || |||||||| | ||| |||| ||| ||||| ||| Sbjct: 3417 acccacatcagggaaaagatcgacgcaaggaggatagcccagacaacgacaatggtcggc 3358 Query: 285 gtgcggttctgcttccccatgaaacccttggggaaggggta 325 |||||||||||||||||||||| |||||| |||||||||| Sbjct: 3357 gtgcggttctgcttccccatgaggcccttgaggaaggggta 3317
>gb|AY372244.1| Zea mays cellulose synthase catalytic subunit 10 (CesA10) mRNA, complete cds Length = 3470 Score = 87.7 bits (44), Expect = 2e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 213 gggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaaacaatg 272 ||||||||| | ||||| | ||| || ||||||||||| |||||||||||||| | | | Sbjct: 3210 gggtcgatcctgacccagacgagcgagaagatggaggcgaggaggatggaccagagcacg 3151 Query: 273 acgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggtagag 328 |||||||| ||||| ||||||||| ||||||||| |||||| |||| |||||||| Sbjct: 3150 acgatggtgggcgtccggttctgcctccccatgagccccttgaggaacgggtagag 3095
>gb|AY483156.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA8) mRNA, partial cds Length = 1255 Score = 87.7 bits (44), Expect = 2e-14 Identities = 104/124 (83%) Strand = Plus / Minus Query: 208 tgaaagggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaaa 267 |||| ||||||||| | ||||| || ||||| || ||||||||||| || | |||||| | Sbjct: 1040 tgaaggggtcgatcctgacccaaagcagggagaacatggaggctagcagcacggaccata 981 Query: 268 caatgacgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggtaga 327 ||||| ||||| ||||| | ||||||| ||||||||||||||||| |||| ||||||| Sbjct: 980 tgatgacaatggtgggcgtcctgttctgcctccccatgaaacccttgaggaacgggtaga 921 Query: 328 gatg 331 |||| Sbjct: 920 gatg 917
>gb|AY107656.1| Zea mays PCO126464 mRNA sequence Length = 1189 Score = 87.7 bits (44), Expect = 2e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 213 gggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaaacaatg 272 ||||||||| | ||||| | ||| || ||||||||||| |||||||||||||| | | | Sbjct: 909 gggtcgatcctgacccagacgagcgagaagatggaggcgaggaggatggaccagagcacg 850 Query: 273 acgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggtagag 328 |||||||| ||||| ||||||||| ||||||||| |||||| |||| |||||||| Sbjct: 849 acgatggtgggcgtccggttctgcctccccatgagccccttgaggaacgggtagag 794
>gb|AY372245.1| Zea mays cellulose synthase catalytic subunit 11 (CesA11) mRNA, complete cds Length = 3231 Score = 81.8 bits (41), Expect = 1e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 213 gggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaaacaatg 272 ||||||||||| |||||||||||||| |||| |||||| ||||||| |||||| | | Sbjct: 2914 gggtcgatcttgacccacaggagggagaagacggaggcgaggaggacggaccagagcacc 2855 Query: 273 acgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggta 325 |||||||| |||||||||||||| ||||||| ||||||| |||| ||||| Sbjct: 2854 acgatggtcggcgtgcggttctggcggcccatgagacccttgaggaacgggta 2802
>gb|AY106476.1| Zea mays PCO143801 mRNA sequence Length = 833 Score = 81.8 bits (41), Expect = 1e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 213 gggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaaacaatg 272 ||||||||||| |||||||||||||| |||| |||||| ||||||| |||||| | | Sbjct: 517 gggtcgatcttgacccacaggagggagaagacggaggcgaggaggacggaccagagcacc 458 Query: 273 acgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggta 325 |||||||| |||||||||||||| ||||||| ||||||| |||| ||||| Sbjct: 457 acgatggtcggcgtgcggttctggcggcccatgagacccttgaggaacgggta 405
>ref|NM_191233.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2820 Score = 69.9 bits (35), Expect = 5e-09 Identities = 98/119 (82%) Strand = Plus / Minus Query: 207 atgaaagggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaa 266 ||||| ||||||||||| ||||| |||||||| |||| |||||| || |||| ||||| Sbjct: 2768 atgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagaccag 2709 Query: 267 acaatgacgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggta 325 | | ||||||||| ||||| |||||||| ||||||| ||||||| |||||||||| Sbjct: 2708 agcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggta 2650
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 69.9 bits (35), Expect = 5e-09 Identities = 98/119 (82%) Strand = Plus / Minus Query: 207 atgaaagggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaa 266 ||||| ||||||||||| ||||| |||||||| |||| |||||| || |||| ||||| Sbjct: 31421516 atgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagaccag 31421457 Query: 267 acaatgacgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggta 325 | | ||||||||| ||||| |||||||| ||||||| ||||||| |||||||||| Sbjct: 31421456 agcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggta 31421398
>dbj|AP003237.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0046E05 Length = 162776 Score = 69.9 bits (35), Expect = 5e-09 Identities = 98/119 (82%) Strand = Plus / Minus Query: 207 atgaaagggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaa 266 ||||| ||||||||||| ||||| |||||||| |||| |||||| || |||| ||||| Sbjct: 15580 atgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagaccag 15521 Query: 267 acaatgacgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggta 325 | | ||||||||| ||||| |||||||| ||||||| ||||||| |||||||||| Sbjct: 15520 agcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggta 15462
>dbj|AK105078.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-G07, full insert sequence Length = 1504 Score = 69.9 bits (35), Expect = 5e-09 Identities = 98/119 (82%) Strand = Plus / Minus Query: 207 atgaaagggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaa 266 ||||| ||||||||||| ||||| |||||||| |||| |||||| || |||| ||||| Sbjct: 1162 atgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagaccag 1103 Query: 267 acaatgacgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggta 325 | | ||||||||| ||||| |||||||| ||||||| ||||||| |||||||||| Sbjct: 1102 agcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggta 1044
>dbj|AK100475.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093O20, full insert sequence Length = 3462 Score = 69.9 bits (35), Expect = 5e-09 Identities = 98/119 (82%) Strand = Plus / Minus Query: 207 atgaaagggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaa 266 ||||| ||||||||||| ||||| |||||||| |||| |||||| || |||| ||||| Sbjct: 3050 atgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagaccag 2991 Query: 267 acaatgacgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggta 325 | | ||||||||| ||||| |||||||| ||||||| ||||||| |||||||||| Sbjct: 2990 agcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggta 2932
>dbj|AK100374.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084J22, full insert sequence Length = 2024 Score = 69.9 bits (35), Expect = 5e-09 Identities = 98/119 (82%) Strand = Plus / Minus Query: 207 atgaaagggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaa 266 ||||| ||||||||||| ||||| |||||||| |||| |||||| || |||| ||||| Sbjct: 1616 atgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagaccag 1557 Query: 267 acaatgacgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggta 325 | | ||||||||| ||||| |||||||| ||||||| ||||||| |||||||||| Sbjct: 1556 agcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggta 1498
>gb|AY483154.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA4) mRNA, partial cds Length = 1819 Score = 67.9 bits (34), Expect = 2e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 207 atgaaagggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaa 266 ||||| ||||||||| | ||||||| ||||| ||||||||||| || |||| ||||| Sbjct: 1574 atgaaggggtcgatcctgacccacacaagggagaagatggaggcgagcaggacagaccag 1515 Query: 267 acaatgacgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggtag 326 | | |||||||| ||||| ||||||||| ||||||||| |||||| |||| |||||| Sbjct: 1514 agcacaacgatggtgggcgtccggttctgcctccccatgagccccttgaggaacgggtag 1455 Query: 327 ag 328 || Sbjct: 1454 ag 1453
>gb|BT019129.1| Zea mays clone Contig756.F mRNA sequence Length = 754 Score = 65.9 bits (33), Expect = 8e-08 Identities = 84/101 (83%) Strand = Plus / Minus Query: 225 acccacaggagggaaaagatggaggctaggaggatggaccaaacaatgacgatggttggc 284 ||||||||||| || ||||| ||||| || ||||||||||| || |||||||| || ||| Sbjct: 485 acccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcggc 426 Query: 285 gtgcggttctgcttccccatgaaacccttggggaaggggta 325 || | ||||||| |||||| | ||||||| |||| ||||| Sbjct: 425 gtcctgttctgcctccccaccagacccttgaggaacgggta 385
>gb|AY483153.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA5) mRNA, partial cds Length = 2814 Score = 65.9 bits (33), Expect = 8e-08 Identities = 93/113 (82%) Strand = Plus / Minus Query: 213 gggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggaccaaacaatg 272 ||||||||||| ||||| |||||||| |||| ||||| || |||| |||||| | ||| Sbjct: 2579 gggtcgatcttgacccagaggagggagaagaccgaggccagcaggacggaccagagtatg 2520 Query: 273 acgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggta 325 |||||||| || || ||||||||| ||||||| ||||||| |||| ||||| Sbjct: 2519 acgatggtgggagtccggttctgccggcccatgagacccttgaggaacgggta 2467
>gb|AF200532.1|AF200532 Zea mays cellulose synthase-8 (CesA-8) mRNA, complete cds Length = 3812 Score = 65.9 bits (33), Expect = 8e-08 Identities = 84/101 (83%) Strand = Plus / Minus Query: 225 acccacaggagggaaaagatggaggctaggaggatggaccaaacaatgacgatggttggc 284 ||||||||||| || ||||| ||||| || ||||||||||| || |||||||| || ||| Sbjct: 3428 acccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcggc 3369 Query: 285 gtgcggttctgcttccccatgaaacccttggggaaggggta 325 || | ||||||| |||||| | ||||||| |||| ||||| Sbjct: 3368 gtcctgttctgcctccccaccagacccttgaggaacgggta 3328
>gb|AY103701.1| Zea mays PCO120363 mRNA sequence Length = 3788 Score = 65.9 bits (33), Expect = 8e-08 Identities = 84/101 (83%) Strand = Plus / Minus Query: 225 acccacaggagggaaaagatggaggctaggaggatggaccaaacaatgacgatggttggc 284 ||||||||||| || ||||| ||||| || ||||||||||| || |||||||| || ||| Sbjct: 3413 acccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcggc 3354 Query: 285 gtgcggttctgcttccccatgaaacccttggggaaggggta 325 || | ||||||| |||||| | ||||||| |||| ||||| Sbjct: 3353 gtcctgttctgcctccccaccagacccttgaggaacgggta 3313
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 58.0 bits (29), Expect = 2e-05 Identities = 77/93 (82%) Strand = Plus / Minus Query: 236 ggaaaagatggaggctaggaggatggaccaaacaatgacgatggttggcgtgcggttctg 295 ||||||||||||||| || || | |||||| | | || ||||| ||||| |||||||| Sbjct: 15230796 ggaaaagatggaggcgagcagcacggaccagatgacaacaatggtgggcgtccggttctg 15230737 Query: 296 cttccccatgaaacccttggggaaggggtagag 328 | ||||||||| |||||| ||||||||||||| Sbjct: 15230736 cctccccatgagccccttgaggaaggggtagag 15230704
>gb|AF200530.1|AF200530 Zea mays cellulose synthase-6 (CesA-6) mRNA, complete cds Length = 3538 Score = 58.0 bits (29), Expect = 2e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 252 aggaggatggaccaaacaatgacgatggttggcgtgcggttctgcttccccatgaaaccc 311 |||||||||||||| |||||||| || |||||||| | ||||||| |||| | | |||| Sbjct: 3125 aggaggatggaccagacaatgacaatcgttggcgtcctgttctgcctcccaaccagaccc 3066 Query: 312 ttggggaaggggtagagatgg 332 ||| |||| ||||| |||||| Sbjct: 3065 ttgaggaacgggtaaagatgg 3045
>gb|AF200528.1|AF200528 Zea mays cellulose synthase-4 (CesA-4) mRNA, complete cds Length = 3745 Score = 58.0 bits (29), Expect = 2e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 225 acccacaggagggaaaagatggaggctaggaggatggaccaaacaatgacgatggttggc 284 |||||||| | ||| |||||||| || || ||||||| ||| || | ||||||||| || Sbjct: 3486 acccacagcaaggagaagatggacgccagcaggatggcccagacgacgacgatggtcggg 3427 Query: 285 gtgcggttctgcttccccatgaaacccttggggaaggggta 325 |||||||||||| | ||||||| |||||| |||| ||||| Sbjct: 3426 gtgcggttctgcctgcccatgaggcccttgaggaacgggta 3386
>dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1740_D06 Length = 187410 Score = 58.0 bits (29), Expect = 2e-05 Identities = 77/93 (82%) Strand = Plus / Minus Query: 236 ggaaaagatggaggctaggaggatggaccaaacaatgacgatggttggcgtgcggttctg 295 ||||||||||||||| || || | |||||| | | || ||||| ||||| |||||||| Sbjct: 124772 ggaaaagatggaggcgagcagcacggaccagatgacaacaatggtgggcgtccggttctg 124713 Query: 296 cttccccatgaaacccttggggaaggggtagag 328 | ||||||||| |||||| ||||||||||||| Sbjct: 124712 cctccccatgagccccttgaggaaggggtagag 124680
>dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0418B08 Length = 165909 Score = 58.0 bits (29), Expect = 2e-05 Identities = 77/93 (82%) Strand = Plus / Minus Query: 236 ggaaaagatggaggctaggaggatggaccaaacaatgacgatggttggcgtgcggttctg 295 ||||||||||||||| || || | |||||| | | || ||||| ||||| |||||||| Sbjct: 9985 ggaaaagatggaggcgagcagcacggaccagatgacaacaatggtgggcgtccggttctg 9926 Query: 296 cttccccatgaaacccttggggaaggggtagag 328 | ||||||||| |||||| ||||||||||||| Sbjct: 9925 cctccccatgagccccttgaggaaggggtagag 9893
>dbj|AK121170.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081B08, full insert sequence Length = 3631 Score = 58.0 bits (29), Expect = 2e-05 Identities = 77/93 (82%) Strand = Plus / Minus Query: 236 ggaaaagatggaggctaggaggatggaccaaacaatgacgatggttggcgtgcggttctg 295 ||||||||||||||| || || | |||||| | | || ||||| ||||| |||||||| Sbjct: 3185 ggaaaagatggaggcgagcagcacggaccagatgacaacaatggtgggcgtccggttctg 3126 Query: 296 cttccccatgaaacccttggggaaggggtagag 328 | ||||||||| |||||| ||||||||||||| Sbjct: 3125 cctccccatgagccccttgaggaaggggtagag 3093
>gb|AY108113.1| Zea mays PCO126465 mRNA sequence Length = 3763 Score = 58.0 bits (29), Expect = 2e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 225 acccacaggagggaaaagatggaggctaggaggatggaccaaacaatgacgatggttggc 284 |||||||| | ||| |||||||| || || ||||||| ||| || | ||||||||| || Sbjct: 3504 acccacagcaaggagaagatggacgccagcaggatggcccagacgacgacgatggtcggg 3445 Query: 285 gtgcggttctgcttccccatgaaacccttggggaaggggta 325 |||||||||||| | ||||||| |||||| |||| ||||| Sbjct: 3444 gtgcggttctgcctgcccatgaggcccttgaggaacgggta 3404
>gb|AY104730.1| Zea mays PCO100501 mRNA sequence Length = 3783 Score = 58.0 bits (29), Expect = 2e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 252 aggaggatggaccaaacaatgacgatggttggcgtgcggttctgcttccccatgaaaccc 311 |||||||||||||| |||||||| || |||||||| | ||||||| |||| | | |||| Sbjct: 3358 aggaggatggaccagacaatgacaatcgttggcgtcctgttctgcctcccaaccagaccc 3299 Query: 312 ttggggaaggggtagagatgg 332 ||| |||| ||||| |||||| Sbjct: 3298 ttgaggaacgggtaaagatgg 3278
>gb|AY633545.1| Physcomitrella patens cellulose synthase catalytic subunit (CesA5) gene, partial cds Length = 2345 Score = 56.0 bits (28), Expect = 7e-05 Identities = 61/72 (84%) Strand = Plus / Minus Query: 225 acccacaggagggaaaagatggaggctaggaggatggaccaaacaatgacgatggttggc 284 ||||||||||| || ||||||||||| || || |||||||| || || || ||||| ||| Sbjct: 2341 acccacaggagagagaagatggaggcgagcagaatggaccacacgatcacaatggtaggc 2282 Query: 285 gtgcggttctgc 296 || ||||||||| Sbjct: 2281 gttcggttctgc 2270
>emb|CT009508.6| M.truncatula DNA sequence from clone MTH2-76H16 on chromosome 3, complete sequence Length = 133910 Score = 56.0 bits (28), Expect = 7e-05 Identities = 79/96 (82%) Strand = Plus / Minus Query: 237 gaaaagatggaggctaggaggatggaccaaacaatgacgatggttggcgtgcggttctgc 296 ||||| ||||| || || || ||||||||||||| |||||||||||||| |||||||| Sbjct: 129748 gaaaaaatggatgcaagaagaatggaccaaacaaccacgatggttggcgttcggttctgg 129689 Query: 297 ttccccatgaaacccttggggaaggggtagagatgg 332 ||||| | ||| || ||||||||||||||||| Sbjct: 129688 cgtcccataagacctttaaggaaggggtagagatgg 129653
>gb|AC149572.14| Medicago truncatula clone mth2-116e22, complete sequence Length = 120017 Score = 56.0 bits (28), Expect = 7e-05 Identities = 79/96 (82%) Strand = Plus / Minus Query: 237 gaaaagatggaggctaggaggatggaccaaacaatgacgatggttggcgtgcggttctgc 296 ||||| ||||| || || || ||||||||||||| |||||||||||||| |||||||| Sbjct: 93770 gaaaaaatggatgcaagaagaatggaccaaacaaccacgatggttggcgttcggttctgg 93711 Query: 297 ttccccatgaaacccttggggaaggggtagagatgg 332 ||||| | ||| || ||||||||||||||||| Sbjct: 93710 cgtcccataagacctttaaggaaggggtagagatgg 93675
>gb|DQ014508.1| Eucalyptus grandis cellulose synthase 4 (CesA4) mRNA, complete cds Length = 3782 Score = 56.0 bits (28), Expect = 7e-05 Identities = 61/72 (84%) Strand = Plus / Minus Query: 224 cacccacaggagggaaaagatggaggctaggaggatggaccaaacaatgacgatggttgg 283 ||||||||| || || || ||||| ||||||||||| |||||||||| || |||||||| Sbjct: 3355 cacccacagaagtgagaaaatggatgctaggaggatcgaccaaacaactacaatggttgg 3296 Query: 284 cgtgcggttctg 295 ||||| ||||| Sbjct: 3295 tgtgcgtttctg 3284
>gb|AY372246.1| Zea mays cellulose synthase catalytic subunit 12 (CesA12) mRNA, complete cds Length = 3443 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 207 atgaaagggtcgatcttcacccacaggagggaaaagatggaggctaggaggatggacca 265 ||||||||||||||| | ||||| || ||||| ||||||||||| || || |||||||| Sbjct: 3201 atgaaagggtcgatcctgacccagagcagggagaagatggaggccagcagaatggacca 3143
>gb|BT018125.1| Zea mays clone EL01N0554C08.c mRNA sequence Length = 1450 Score = 50.1 bits (25), Expect = 0.005 Identities = 82/101 (81%) Strand = Plus / Minus Query: 225 acccacaggagggaaaagatggaggctaggaggatggaccaaacaatgacgatggttggc 284 |||||||| | ||| ||||| || || || ||||| | |||||||| |||||||| || Sbjct: 1195 acccacagcaaggagaagatcgacgccagcaggatcgcccaaacaaccacgatggtcggg 1136 Query: 285 gtgcggttctgcttccccatgaaacccttggggaaggggta 325 |||||||||||| ||||||| ||||||| |||| ||||| Sbjct: 1135 gtgcggttctgccgacccatgagacccttgaggaacgggta 1095
>gb|AY389728.1| Hyacinthus orientalis cellulose synthase protein mRNA, partial cds Length = 782 Score = 50.1 bits (25), Expect = 0.005 Identities = 73/89 (82%) Strand = Plus / Minus Query: 240 aagatggaggctaggaggatggaccaaacaatgacgatggttggcgtgcggttctgcttc 299 |||||||| || |||||||| ||||| |||| || ||||| || |||||||||||| || Sbjct: 636 aagatggaagccaggaggatcgaccagacaaccacaatggtcggagtgcggttctgcctc 577 Query: 300 cccatgaaacccttggggaaggggtagag 328 ||||| ||||| ||||||||||||| Sbjct: 576 cccatcgggaccttgaggaaggggtagag 548
>gb|DQ020212.1| Bambusa oldhamii cellulose synthase BoCesA4b mRNA, partial cds Length = 3409 Score = 50.1 bits (25), Expect = 0.005 Identities = 82/101 (81%) Strand = Plus / Minus Query: 225 acccacaggagggaaaagatggaggctaggaggatggaccaaacaatgacgatggttggc 284 |||||||| | ||| ||||| || || |||||||| | ||| |||| || ||||| ||| Sbjct: 3137 acccacagcaaggagaagatcgaagcaaggaggattgcccagacaacaacaatggtcggc 3078 Query: 285 gtgcggttctgcttccccatgaaacccttggggaaggggta 325 |||||||| ||| | ||||||| ||||||| |||| ||||| Sbjct: 3077 gtgcggttttgcctacccatgagacccttgaggaatgggta 3037
>gb|AC158909.6| Mus musculus chromosome 1, clone RP23-118K4, complete sequence Length = 218810 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 84 ctacaacaacaaaatcccatccaa 107 |||||||||||||||||||||||| Sbjct: 118438 ctacaacaacaaaatcccatccaa 118461
>gb|AY483151.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA3) mRNA, partial cds Length = 3362 Score = 48.1 bits (24), Expect = 0.018 Identities = 60/72 (83%) Strand = Plus / Minus Query: 225 acccacaggagggaaaagatggaggctaggaggatggaccaaacaatgacgatggttggc 284 |||||||| | ||| |||||||| || || ||||||| ||| || | |||||||| ||| Sbjct: 3089 acccacagcaaggagaagatggatgcaagaaggatggcccagacgacaacgatggtcggc 3030 Query: 285 gtgcggttctgc 296 |||||||||||| Sbjct: 3029 gtgcggttctgc 3018
>gb|AC123718.9| Mus musculus chromosome 1, clone RP23-401A11, complete sequence Length = 225702 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Minus Query: 84 ctacaacaacaaaatcccatccaa 107 |||||||||||||||||||||||| Sbjct: 146708 ctacaacaacaaaatcccatccaa 146685
>gb|AC005988.1|AC005988 Homo sapiens chromosome 17, clone hRPK.299_G_24, complete sequence Length = 173126 Score = 46.1 bits (23), Expect = 0.071 Identities = 26/27 (96%) Strand = Plus / Minus Query: 223 tcacccacaggagggaaaagatggagg 249 ||||||||||||||||||||| ||||| Sbjct: 98396 tcacccacaggagggaaaagagggagg 98370
>gb|AY633541.1| Physcomitrella patens cellulose synthase catalytic subunit (CesA1) gene, partial cds Length = 4060 Score = 44.1 bits (22), Expect = 0.28 Identities = 43/50 (86%) Strand = Plus / Minus Query: 261 gaccaaacaatgacgatggttggcgtgcggttctgcttccccatgaaacc 310 ||||| ||||| ||||| ||||| |||||||||||| | ||||| ||||| Sbjct: 3552 gaccacacaatcacgattgttggagtgcggttctgcctgcccatcaaacc 3503
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ggggcaataataacttacataa 69 |||||||||||||||||||||| Sbjct: 1008783 ggggcaataataacttacataa 1008804
>gb|DQ020214.1| Bambusa oldhamii cellulose synthase BoCesA6 mRNA, partial cds Length = 2867 Score = 44.1 bits (22), Expect = 0.28 Identities = 52/62 (83%) Strand = Plus / Minus Query: 225 acccacaggagggaaaagatggaggctaggaggatggaccaaacaatgacgatggttggc 284 ||||| ||||| || ||||| || || || || |||||||| ||||||||||| |||||| Sbjct: 2494 acccagaggagtgagaagattgaagccagaagaatggaccagacaatgacgattgttggc 2435 Query: 285 gt 286 || Sbjct: 2434 gt 2433
>emb|AL031670.6|HS681N20 Human DNA sequence from clone RP4-681N20 on chromosome 20p12.1-13 Contains the 3' end of the PANK2 gene the Pantothenate kinase 2 (Hallervorden-Spatz syndrome), RNF24 gene for ring finger protein 24, a FTL (ferritin light polypeptide) pseudogene and two CpG Islands, complete sequence Length = 130263 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 81 catctacaacaacaaaatccca 102 |||||||||||||||||||||| Sbjct: 73380 catctacaacaacaaaatccca 73359
>ref|NM_119393.2| Arabidopsis thaliana CESA1 (CELLULASE SYNTHASE 1); transferase, transferring glycosyl groups AT4G32410 (CESA1) mRNA, complete cds Length = 3912 Score = 42.1 bits (21), Expect = 1.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 240 aagatggaggctaggaggatggaccaaacaatgacgatggttggcgtgcggtt 292 ||||||||||| || || | ||||| ||||||||||||||||| || ||||| Sbjct: 3438 aagatggaggcgagaagaacagaccagacaatgacgatggttggtgttcggtt 3386
>gb|AC120543.7| Mus musculus chromosome 8, clone RP23-330A24, complete sequence Length = 210696 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 acaacaacaaaatcccatcca 106 ||||||||||||||||||||| Sbjct: 172738 acaacaacaaaatcccatcca 172758
>emb|CT009661.10| Mouse DNA sequence from clone CH29-621D18 on chromosome 17, complete sequence Length = 224982 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 86 acaacaacaaaatcccatccaaccc 110 ||||||||||||||||| ||||||| Sbjct: 51271 acaacaacaaaatcccaaccaaccc 51295
>gb|AC126252.3| Mus musculus BAC clone RP23-480B9 from chromosome 17, complete sequence Length = 172380 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 86 acaacaacaaaatcccatccaaccc 110 ||||||||||||||||| ||||||| Sbjct: 34402 acaacaacaaaatcccaaccaaccc 34378
>emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 77 Length = 197252 Score = 42.1 bits (21), Expect = 1.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 240 aagatggaggctaggaggatggaccaaacaatgacgatggttggcgtgcggtt 292 ||||||||||| || || | ||||| ||||||||||||||||| || ||||| Sbjct: 55103 aagatggaggcgagaagaacagaccagacaatgacgatggttggtgttcggtt 55155
>emb|AL034567.1|ATF8B4 Arabidopsis thaliana DNA chromosome 4, BAC clone F8B4 (ESSA project) Length = 93257 Score = 42.1 bits (21), Expect = 1.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 240 aagatggaggctaggaggatggaccaaacaatgacgatggttggcgtgcggtt 292 ||||||||||| || || | ||||| ||||||||||||||||| || ||||| Sbjct: 41386 aagatggaggcgagaagaacagaccagacaatgacgatggttggtgttcggtt 41438
>gb|BT008654.1| Arabidopsis thaliana clone RAFL09-89-G08 (R19778) putative cellulose synthase catalytic subunit (RSW1) (At4g32410) mRNA, complete cds Length = 3763 Score = 42.1 bits (21), Expect = 1.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 240 aagatggaggctaggaggatggaccaaacaatgacgatggttggcgtgcggtt 292 ||||||||||| || || | ||||| ||||||||||||||||| || ||||| Sbjct: 3305 aagatggaggcgagaagaacagaccagacaatgacgatggttggtgttcggtt 3253
>dbj|AK164733.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630050G05 product:serine/arginine-rich protein specific kinase 1, full insert sequence Length = 4958 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 86 acaacaacaaaatcccatccaaccc 110 ||||||||||||||||| ||||||| Sbjct: 2256 acaacaacaaaatcccaaccaaccc 2232
>dbj|AK222115.1| Arabidopsis thaliana mRNA for cellulose synthase catalytic subunit, complete cds, clone: RAFL22-92-A12 Length = 1456 Score = 42.1 bits (21), Expect = 1.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 240 aagatggaggctaggaggatggaccaaacaatgacgatggttggcgtgcggtt 292 ||||||||||| || || | ||||| ||||||||||||||||| || ||||| Sbjct: 1034 aagatggaggcgagaagaacagaccagacaatgacgatggttggtgttcggtt 982
>gb|DQ020213.1| Bambusa oldhamii cellulose synthase BoCesA5 mRNA, complete cds Length = 3613 Score = 42.1 bits (21), Expect = 1.1 Identities = 81/101 (80%) Strand = Plus / Minus Query: 225 acccacaggagggaaaagatggaggctaggaggatggaccaaacaatgacgatggttggc 284 |||||||| | ||| ||||| || || |||||||||| ||| || | || ||||| || Sbjct: 3384 acccacagcaaggagaagatagatgcaaggaggatggcccagacgacaacaatggtcggt 3325 Query: 285 gtgcggttctgcttccccatgaaacccttggggaaggggta 325 |||||||||||| ||||||| |||||| |||||||||| Sbjct: 3324 gtgcggttctgccgacccatgagacccttaaggaaggggta 3284
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 175 gccccatggcgacggctttctgggt 199 |||||||||||| |||||||||||| Sbjct: 3045032 gccccatggcgaaggctttctgggt 3045008
>emb|BX827280.1|CNS0A2E6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS32ZA11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 832 Score = 42.1 bits (21), Expect = 1.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 240 aagatggaggctaggaggatggaccaaacaatgacgatggttggcgtgcggtt 292 ||||||||||| || || | ||||| ||||||||||||||||| || ||||| Sbjct: 417 aagatggaggcgagaagaacagaccagacaatgacgatggttggtgttcggtt 365
>gb|AF525360.1| Mesotaenium caldariorum cellulose synthase catalytic subunit (CesA1) gene, complete cds Length = 6176 Score = 42.1 bits (21), Expect = 1.1 Identities = 84/105 (80%) Strand = Plus / Minus Query: 218 gatcttcacccacaggagggaaaagatggaggctaggaggatggaccaaacaatgacgat 277 |||||| |||||||| || ||||||||||| || || || | ||||| ||||||| || Sbjct: 5853 gatcttgacccacagcagcgaaaagatggacgccagcagaacagaccacacaatgatgag 5794 Query: 278 ggttggcgtgcggttctgcttccccatgaaacccttggggaaggg 322 ||| ||||| | ||| ||| ||||||| ||||||| ||||||| Sbjct: 5793 ggtgggcgttctgttgctcttgcccatgagacccttgaggaaggg 5749
>gb|AF200533.1|AF200533 Zea mays cellulose synthase-9 (CesA-9) mRNA, complete cds Length = 3795 Score = 42.1 bits (21), Expect = 1.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 273 acgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggta 325 |||||||| || |||||||||||| ||||||| ||||||| |||| ||||| Sbjct: 3362 acgatggtcggggtgcggttctgccgacccatgagacccttgaggaacgggta 3310
>emb|X60106.1|ECCSVR E.coli csvR gene Length = 4689 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 aataataacttacataaaact 73 ||||||||||||||||||||| Sbjct: 4034 aataataacttacataaaact 4014
>gb|AY112236.1| Zea mays CL1160_1 mRNA sequence Length = 3728 Score = 42.1 bits (21), Expect = 1.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 273 acgatggttggcgtgcggttctgcttccccatgaaacccttggggaaggggta 325 |||||||| || |||||||||||| ||||||| ||||||| |||| ||||| Sbjct: 3362 acgatggtcggggtgcggttctgccgacccatgagacccttgaggaacgggta 3310
>gb|AF027172.1|AF027172 Arabidopsis thaliana cellulose synthase catalytic subunit (RSW1) gene, complete cds Length = 8401 Score = 42.1 bits (21), Expect = 1.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 240 aagatggaggctaggaggatggaccaaacaatgacgatggttggcgtgcggtt 292 ||||||||||| || || | ||||| ||||||||||||||||| || ||||| Sbjct: 7580 aagatggaggcgagaagaacagaccagacaatgacgatggttggtgttcggtt 7528
>dbj|AP004509.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT16K17, TM0037a, complete sequence Length = 84322 Score = 42.1 bits (21), Expect = 1.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 276 atggttggcgtgcggttctgcttccccatgaaacccttggggaaggggtagagatgg 332 ||||| ||||||||||||||| ||||| ||||| ||| |||| || ||||||||| Sbjct: 44306 atggtcggcgtgcggttctgccgacccatcaaacctttgaggaatggatagagatgg 44362
>ref|NM_197900.1| Oryza sativa (japonica cultivar-group) putative cellulose synthase (OSJNBa0035H01.10), mRNA Length = 3384 Score = 40.1 bits (20), Expect = 4.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 300 cccatgaaacccttggggaaggggtagagatg 331 ||||||| ||||||| ||||||||||||||| Sbjct: 3245 cccatgaggcccttggcgaaggggtagagatg 3214
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 caacaaaatcccatccaacc 109 |||||||||||||||||||| Sbjct: 1996161 caacaaaatcccatccaacc 1996142
>gb|AC166564.2| Spironucleus vortens clone JGIBAWF-9K17, complete sequence Length = 38651 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 tcttcatctacaacaacaaaatcc 100 ||||||||||| |||||||||||| Sbjct: 21531 tcttcatctaccacaacaaaatcc 21554
>emb|AL590714.27| Human DNA sequence from clone RP11-297K8 on chromosome 1 Contains a novel gene, the gene for a novel protein (HSPC155), the USP21 gene for ubiquitin specific protease 21, the PPOX gene for protoporphyrinogen oxidase, the B4GALT3 gene for UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase polypeptide 3, the ADAMTS4 gene for a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif 4, the NDUFS2 gene for NADH dehydrogenase (ubiquinone) Fe-S protein 2 (49kDa (NADH-coenzyme Q reductase)), the FCER1G gene for Fc fragment of IgE high affinity I receptor for gamma polypeptide, the APOA2 gene for apolipoprotein A-II, the gene for a novel protein (FLJ12770), the NR1I3 gene for nuclear receptor subfamily 1 group I member 3 and the 5' end of a novel gene, complete sequence Length = 133512 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 ttggggaaggggtagagatg 331 |||||||||||||||||||| Sbjct: 36062 ttggggaaggggtagagatg 36081
>gb|AC027037.6| Oryza sativa chromosome 10 BAC OSJNBa0035H01 genomic sequence, complete sequence Length = 64582 Score = 40.1 bits (20), Expect = 4.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 300 cccatgaaacccttggggaaggggtagagatg 331 ||||||| ||||||| ||||||||||||||| Sbjct: 61123 cccatgaggcccttggcgaaggggtagagatg 61092
>ref|XM_969653.1| PREDICTED: Tribolium castaneum similar to CG32717-PB, isoform B (LOC663614), mRNA Length = 3150 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 tcttcggcgccgatcagcag 161 |||||||||||||||||||| Sbjct: 644 tcttcggcgccgatcagcag 625
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 caacaaaatcccatccaacc 109 |||||||||||||||||||| Sbjct: 157785 caacaaaatcccatccaacc 157766
>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete sequence Length = 139999 Score = 40.1 bits (20), Expect = 4.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 300 cccatgaaacccttggggaaggggtagagatg 331 ||||||| ||||||| ||||||||||||||| Sbjct: 74 cccatgaggcccttggcgaaggggtagagatg 43
>tpg|BK000089.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) cellulose synthase-like D1 gene, complete cds Length = 4188 Score = 40.1 bits (20), Expect = 4.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 300 cccatgaaacccttggggaaggggtagagatg 331 ||||||| ||||||| ||||||||||||||| Sbjct: 3601 cccatgaggcccttggcgaaggggtagagatg 3570
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 cgatcagcagtcgacgccac 171 |||||||||||||||||||| Sbjct: 28790127 cgatcagcagtcgacgccac 28790108
>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0459B01 Length = 163087 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 cgatcagcagtcgacgccac 171 |||||||||||||||||||| Sbjct: 106700 cgatcagcagtcgacgccac 106681
>dbj|AK110534.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-A07, full insert sequence Length = 1144 Score = 40.1 bits (20), Expect = 4.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 300 cccatgaaacccttggggaaggggtagagatg 331 ||||||| ||||||| ||||||||||||||| Sbjct: 637 cccatgaggcccttggcgaaggggtagagatg 606
>dbj|AK062786.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-B09, full insert sequence Length = 596 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 cgatcagcagtcgacgccac 171 |||||||||||||||||||| Sbjct: 160 cgatcagcagtcgacgccac 141
>emb|CR942285.1| Escherichia coli plasmid pCoo Length = 98396 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 aataataacttacataaaac 72 |||||||||||||||||||| Sbjct: 68588 aataataacttacataaaac 68569 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,890,370 Number of Sequences: 3902068 Number of extensions: 2890370 Number of successful extensions: 68803 Number of sequences better than 10.0: 104 Number of HSP's better than 10.0 without gapping: 104 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 68518 Number of HSP's gapped (non-prelim): 284 length of query: 332 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 310 effective length of database: 17,147,199,772 effective search space: 5315631929320 effective search space used: 5315631929320 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)