ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl13b07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1OR6K3_HUMAN (Q8NGY3) Olfactory receptor 6K3 29 4.1
2OR6K6_HUMAN (Q8NGW6) Olfactory receptor 6K6 28 5.4
3O10G4_HUMAN (Q8NGN3) Olfactory receptor 10G4 (Olfactory receptor... 28 7.1
4MATK_SILLA (Q589A9) Maturase K (Intron maturase) 28 9.2

>OR6K3_HUMAN (Q8NGY3) Olfactory receptor 6K3|
          Length = 315

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 4/31 (12%)
 Frame = -2

Query: 91  VLRSPNRE----AYETCSGHCDFFLLFFSSV 11
           +LR P+ E    A+ TC+GH   F +FF SV
Sbjct: 224 ILRIPSSEGRQKAFSTCAGHLMVFPIFFGSV 254



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>OR6K6_HUMAN (Q8NGW6) Olfactory receptor 6K6|
          Length = 319

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -2

Query: 76  NREAYETCSGHCDFFLLFFSSV 11
           + +A+ TC+ H   FLLFF SV
Sbjct: 237 HHKAFSTCAAHLAVFLLFFGSV 258



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>O10G4_HUMAN (Q8NGN3) Olfactory receptor 10G4 (Olfactory receptor OR11-278)|
          Length = 311

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
 Frame = -2

Query: 115 YVSYYCPFV-LRSPN--REAYETCSGHCDFFLLFF 20
           YVS  C  + +R+ +  R A++TC+ HC   L FF
Sbjct: 217 YVSIVCSILRIRTSDGRRRAFQTCASHCIVVLCFF 251



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>MATK_SILLA (Q589A9) Maturase K (Intron maturase)|
          Length = 503

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = -2

Query: 127 KTEFYVSYY--CPFVLRSPNREAY-ETCSGHCDFFLLFFSSVK 8
           K +FY+ Y+  C F + S  R  Y    S HC  F+ FFSSV+
Sbjct: 294 KWKFYLIYFWQCNFSVWSHPRRIYINRLSTHCLDFIGFFSSVQ 336


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,429,440
Number of Sequences: 219361
Number of extensions: 222586
Number of successful extensions: 908
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 80,573,946
effective HSP length: 18
effective length of database: 76,625,448
effective search space used: 1839010752
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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