>APOM_RAT (P14630) Apolipoprotein M precursor (Apo-M) (ApoM) (Protein Px)|
Length = 190
Score = 27.3 bits (59), Expect = 9.2
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -2
Query: 253 LLFDNSYRPPSE*TIWFGDLPSCLSKKAFV 164
LL++ S PP E F L SCL KAF+
Sbjct: 147 LLYNRSPHPPEECVEEFQSLTSCLDFKAFL 176
Database: uniprot_sprot.fasta
Posted date: May 25, 2006 5:36 PM
Number of letters in database: 80,573,946
Number of sequences in database: 219,361
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,989,933
Number of Sequences: 219361
Number of extensions: 1013994
Number of successful extensions: 2053
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2053
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 1407308304
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)