Clone Name | rbastl13b02 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | V2A_BBMV (P27462) RNA-directed RNA polymerase 2A (EC 2.7.7.48) (... | 28 | 8.3 |
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>V2A_BBMV (P27462) RNA-directed RNA polymerase 2A (EC 2.7.7.48) (protein 2A)| Length = 810 Score = 27.7 bits (60), Expect = 8.3 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = -2 Query: 59 HCCTETHLYFDNSYYRDF 6 H +TH YFD+SYY F Sbjct: 251 HNALKTHAYFDDSYYEGF 268 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 28,988,836 Number of Sequences: 219361 Number of extensions: 433372 Number of successful extensions: 613 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 612 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 613 length of database: 80,573,946 effective HSP length: 54 effective length of database: 68,728,452 effective search space used: 1649482848 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)