Clone Name | rbastl13b01 |
---|---|
Clone Library Name | barley_pub |
>emb|AL132641.3|CNS01DT6 Human chromosome 14 DNA sequence BAC C-3175A2 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 136603 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 267 aattcatgtaatatacagtcta 288 |||||||||||||||||||||| Sbjct: 49539 aattcatgtaatatacagtcta 49560
>gb|AC136223.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0093E24, complete sequence Length = 146492 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 tgttggagatgctcttattg 164 |||||||||||||||||||| Sbjct: 133113 tgttggagatgctcttattg 133132
>gb|AC118286.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1384_A02, complete sequence Length = 100251 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 tgttggagatgctcttattg 164 |||||||||||||||||||| Sbjct: 7380 tgttggagatgctcttattg 7399
>gb|AC137585.3| Mus musculus BAC clone RP23-355I23 from chromosome 18, complete sequence Length = 216041 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 aaatcaaagtcatgcaagcc 250 |||||||||||||||||||| Sbjct: 46715 aaatcaaagtcatgcaagcc 46696
>emb|CR513781.13| Zebrafish DNA sequence from clone CH211-61A15 in linkage group 15, complete sequence Length = 158040 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 ctctaaatttctcaaatggc 43 |||||||||||||||||||| Sbjct: 107860 ctctaaatttctcaaatggc 107879
>emb|AL606611.3|OSJN00044 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0043H09, complete sequence Length = 88824 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 tgttggagatgctcttattg 164 |||||||||||||||||||| Sbjct: 28937 tgttggagatgctcttattg 28918
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 tgttggagatgctcttattg 164 |||||||||||||||||||| Sbjct: 9345566 tgttggagatgctcttattg 9345547
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 tgttggagatgctcttattg 164 |||||||||||||||||||| Sbjct: 8210892 tgttggagatgctcttattg 8210911
>gb|AC102268.11| Mus musculus chromosome 18, clone RP24-248J13, complete sequence Length = 164012 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 aaatcaaagtcatgcaagcc 250 |||||||||||||||||||| Sbjct: 160737 aaatcaaagtcatgcaagcc 160718 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,975,917 Number of Sequences: 3902068 Number of extensions: 2975917 Number of successful extensions: 52471 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 52429 Number of HSP's gapped (non-prelim): 42 length of query: 353 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 331 effective length of database: 17,147,199,772 effective search space: 5675723124532 effective search space used: 5675723124532 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)