>DICER_MOUSE (Q8R418) Endoribonuclease Dicer (EC 3.1.26.-) (Double-strand-specific|
            ribonuclease mDCR-1)
          Length = 1906

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 17/57 (29%), Positives = 24/57 (42%)
 Frame = +2

Query: 23   NECPSVLNKLKFVGPNASTSLGNRTIASTEEKMGRKKAYKENAGCFLLPGAGRLQKT 193
            NECP + N       N STS G+  +++    M   KA K+       P  G   +T
Sbjct: 1223 NECPLLSNTYLDGNANTSTSDGSPAVSTMPAMMNAVKALKDRMDSEQSPSVGYSSRT 1279

>NU5M_TRIRE (Q8SHP7) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3)|
          Length = 692

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
 Frame = -1

Query: 147 FSL*AFFLPIFSSVLAMV---RLPKLVLAFGPTN 55
           F L  FFL IF SVL++V    +PK+V+ F  TN
Sbjct: 509 FKLLPFFLTIFFSVLSIVYYEYMPKVVVDFNLTN 542


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,123,550
Number of Sequences: 219361
Number of extensions: 579539
Number of successful extensions: 1581
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1580
length of database: 80,573,946
effective HSP length: 52
effective length of database: 69,167,174
effective search space used: 1660012176
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)