>ref|XM_507134.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1066_B03.125 mRNA
          Length = 3327

 Score =  103 bits (52), Expect = 2e-19
 Identities = 76/80 (95%), Gaps = 3/80 (3%)
 Strand = Plus / Minus

                                                                        
Query: 134  gcctacaaagagaatgccgggtgcttccttc-ttccaggagcagggagacttcaaaaaac 192
            |||||||| |||||||||||||||||||||| |||||||||||||| |||||| ||||||
Sbjct: 3171 gcctacaatgagaatgccgggtgcttccttctttccaggagcaggg-gacttc-aaaaac 3114

                                
Query: 193  aaacaccgagctcttccttt 212
            ||||||||||||||||||||
Sbjct: 3113 aaacaccgagctcttccttt 3094



 Score = 81.8 bits (41), Expect = 9e-13
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                        
Query: 1    atttgagattaatccggtataaaatgaatgtccatcagttctcaacaagctaaaatttgt 60
            ||||||||||||| |||||||||||||||||||||  ||||||| | ||||||||||  |
Sbjct: 3300 atttgagattaattcggtataaaatgaatgtccattcgttctcagcgagctaaaattcct 3241

                         
Query: 61   cggcccaaatgca 73
            | |||||||||||
Sbjct: 3240 cagcccaaatgca 3228

>ref|XM_480154.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3327

 Score =  103 bits (52), Expect = 2e-19
 Identities = 76/80 (95%), Gaps = 3/80 (3%)
 Strand = Plus / Minus

                                                                        
Query: 134  gcctacaaagagaatgccgggtgcttccttc-ttccaggagcagggagacttcaaaaaac 192
            |||||||| |||||||||||||||||||||| |||||||||||||| |||||| ||||||
Sbjct: 3171 gcctacaatgagaatgccgggtgcttccttctttccaggagcaggg-gacttc-aaaaac 3114

                                
Query: 193  aaacaccgagctcttccttt 212
            ||||||||||||||||||||
Sbjct: 3113 aaacaccgagctcttccttt 3094



 Score = 81.8 bits (41), Expect = 9e-13
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                        
Query: 1    atttgagattaatccggtataaaatgaatgtccatcagttctcaacaagctaaaatttgt 60
            ||||||||||||| |||||||||||||||||||||  ||||||| | ||||||||||  |
Sbjct: 3300 atttgagattaattcggtataaaatgaatgtccattcgttctcagcgagctaaaattcct 3241

                         
Query: 61   cggcccaaatgca 73
            | |||||||||||
Sbjct: 3240 cagcccaaatgca 3228

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  103 bits (52), Expect = 2e-19
 Identities = 76/80 (95%), Gaps = 3/80 (3%)
 Strand = Plus / Minus

                                                                           
Query: 134     gcctacaaagagaatgccgggtgcttccttc-ttccaggagcagggagacttcaaaaaac 192
               |||||||| |||||||||||||||||||||| |||||||||||||| |||||| ||||||
Sbjct: 3136305 gcctacaatgagaatgccgggtgcttccttctttccaggagcaggg-gacttc-aaaaac 3136248

                                   
Query: 193     aaacaccgagctcttccttt 212
               ||||||||||||||||||||
Sbjct: 3136247 aaacaccgagctcttccttt 3136228



 Score = 81.8 bits (41), Expect = 9e-13
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                           
Query: 1       atttgagattaatccggtataaaatgaatgtccatcagttctcaacaagctaaaatttgt 60
               ||||||||||||| |||||||||||||||||||||  ||||||| | ||||||||||  |
Sbjct: 3136434 atttgagattaattcggtataaaatgaatgtccattcgttctcagcgagctaaaattcct 3136375

                            
Query: 61      cggcccaaatgca 73
               | |||||||||||
Sbjct: 3136374 cagcccaaatgca 3136362

>dbj|AP003940.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1066_B03
          Length = 115339

 Score =  103 bits (52), Expect = 2e-19
 Identities = 76/80 (95%), Gaps = 3/80 (3%)
 Strand = Plus / Minus

                                                                         
Query: 134   gcctacaaagagaatgccgggtgcttccttc-ttccaggagcagggagacttcaaaaaac 192
             |||||||| |||||||||||||||||||||| |||||||||||||| |||||| ||||||
Sbjct: 95789 gcctacaatgagaatgccgggtgcttccttctttccaggagcaggg-gacttc-aaaaac 95732

                                 
Query: 193   aaacaccgagctcttccttt 212
             ||||||||||||||||||||
Sbjct: 95731 aaacaccgagctcttccttt 95712



 Score = 81.8 bits (41), Expect = 9e-13
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                         
Query: 1     atttgagattaatccggtataaaatgaatgtccatcagttctcaacaagctaaaatttgt 60
             ||||||||||||| |||||||||||||||||||||  ||||||| | ||||||||||  |
Sbjct: 95918 atttgagattaattcggtataaaatgaatgtccattcgttctcagcgagctaaaattcct 95859

                          
Query: 61    cggcccaaatgca 73
             | |||||||||||
Sbjct: 95858 cagcccaaatgca 95846

>dbj|AK099134.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050E19, full
            insert sequence
          Length = 3326

 Score =  103 bits (52), Expect = 2e-19
 Identities = 76/80 (95%), Gaps = 3/80 (3%)
 Strand = Plus / Minus

                                                                        
Query: 134  gcctacaaagagaatgccgggtgcttccttc-ttccaggagcagggagacttcaaaaaac 192
            |||||||| |||||||||||||||||||||| |||||||||||||| |||||| ||||||
Sbjct: 3170 gcctacaatgagaatgccgggtgcttccttctttccaggagcaggg-gacttc-aaaaac 3113

                                
Query: 193  aaacaccgagctcttccttt 212
            ||||||||||||||||||||
Sbjct: 3112 aaacaccgagctcttccttt 3093



 Score = 81.8 bits (41), Expect = 9e-13
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                        
Query: 1    atttgagattaatccggtataaaatgaatgtccatcagttctcaacaagctaaaatttgt 60
            ||||||||||||| |||||||||||||||||||||  ||||||| | ||||||||||  |
Sbjct: 3299 atttgagattaattcggtataaaatgaatgtccattcgttctcagcgagctaaaattcct 3240

                         
Query: 61   cggcccaaatgca 73
            | |||||||||||
Sbjct: 3239 cagcccaaatgca 3227

>dbj|AK070325.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050A13, full
            insert sequence
          Length = 3347

 Score =  103 bits (52), Expect = 2e-19
 Identities = 76/80 (95%), Gaps = 3/80 (3%)
 Strand = Plus / Minus

                                                                        
Query: 134  gcctacaaagagaatgccgggtgcttcctt-cttccaggagcagggagacttcaaaaaac 192
            |||||||| ||||||||||||||||||||| ||||||||||||||| |||||| ||||||
Sbjct: 3191 gcctacaatgagaatgccgggtgcttccttccttccaggagcaggg-gacttc-aaaaac 3134

                                
Query: 193  aaacaccgagctcttccttt 212
            ||||||||||||||||||||
Sbjct: 3133 aaacaccgagctcttccttt 3114



 Score = 81.8 bits (41), Expect = 9e-13
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                        
Query: 1    atttgagattaatccggtataaaatgaatgtccatcagttctcaacaagctaaaatttgt 60
            ||||||||||||| |||||||||||||||||||||  ||||||| | ||||||||||  |
Sbjct: 3320 atttgagattaattcggtataaaatgaatgtccattcgttctcagcgagctaaaattcct 3261

                         
Query: 61   cggcccaaatgca 73
            | |||||||||||
Sbjct: 3260 cagcccaaatgca 3248

>gb|AC169378.2| Sorghum bicolor clone SB_BBc0007L02, complete sequence
          Length = 138518

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 71/78 (91%), Gaps = 2/78 (2%)
 Strand = Plus / Minus

                                                                          
Query: 134    gcctacaaagagaatgccgggtgcttccttc-ttccaggagcagggagac-ttcaaaaaa 191
              ||||||||||||||||||  ||||||||||| |||||||||||||| ||| || ||||||
Sbjct: 106729 gcctacaaagagaatgccaagtgcttccttcgttccaggagcagggggacattgaaaaaa 106670

                                
Query: 192    caaacaccgagctcttcc 209
              ||||| ||||||||||||
Sbjct: 106669 caaactccgagctcttcc 106652

>gb|BT017514.1| Zea mays clone EL01N0419B06.c mRNA sequence
          Length = 522

 Score = 46.1 bits (23), Expect = 0.048
 Identities = 43/47 (91%), Gaps = 2/47 (4%)
 Strand = Plus / Plus

                                                          
Query: 134 gcctacaaagagaatgccgggtgc-ttccttc-ttccaggagcaggg 178
           |||||||||||||||| ||||||| ||||||| ||||| ||||||||
Sbjct: 119 gcctacaaagagaatgacgggtgctttccttcgttccacgagcaggg 165



 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 186 aaaaaacaaacaccgagctctt 207
           ||||||||||||||||||||||
Sbjct: 181 aaaaaacaaacaccgagctctt 202

>gb|AY108535.1| Zea mays PCO135925 mRNA sequence
          Length = 1700

 Score = 46.1 bits (23), Expect = 0.048
 Identities = 43/47 (91%), Gaps = 2/47 (4%)
 Strand = Plus / Minus

                                                           
Query: 134  gcctacaaagagaatgccgggtgc-ttccttc-ttccaggagcaggg 178
            |||||||||||||||| ||||||| ||||||| ||||| ||||||||
Sbjct: 1550 gcctacaaagagaatgacgggtgctttccttcgttccacgagcaggg 1504



 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 186  aaaaaacaaacaccgagctctt 207
            ||||||||||||||||||||||
Sbjct: 1488 aaaaaacaaacaccgagctctt 1467

>gb|AC107698.8| Mus musculus chromosome 1, clone RP24-496A5, complete sequence
          Length = 159888

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 38     gttctcaacaagctaaaatt 57
              ||||||||||||||||||||
Sbjct: 147046 gttctcaacaagctaaaatt 147027

>emb|AL162393.15| Human DNA sequence from clone RP11-534I8 on chromosome 9 Contains a
              programmed cell death 2 (PDCD2) pseudogene, the 5' end of
              the gene for a novel C2H2 type zinc finger protein and two
              CpG islands, complete sequence
          Length = 184302

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 160    ccttcttccaggagcagggagact 183
              |||||| |||||||||||||||||
Sbjct: 181615 ccttctcccaggagcagggagact 181592

>gb|AC101838.17| Mus musculus chromosome 1, clone RP23-242B14, complete sequence
          Length = 178509

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 38     gttctcaacaagctaaaatt 57
              ||||||||||||||||||||
Sbjct: 177459 gttctcaacaagctaaaatt 177478

>emb|CT010582.12| Mouse DNA sequence from clone RP23-385M20 on chromosome 14, complete
             sequence
          Length = 216611

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    aatgtccatcagttctcaac 46
             ||||||||||||||||||||
Sbjct: 45954 aatgtccatcagttctcaac 45973


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,787,297
Number of Sequences: 3902068
Number of extensions: 2787297
Number of successful extensions: 58159
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58098
Number of HSP's gapped (non-prelim): 47
length of query: 231
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 209
effective length of database: 17,147,199,772
effective search space: 3583764752348
effective search space used: 3583764752348
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)