Clone Name | rbastl13a04 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SYR_THEMA (Q9X0H8) Arginyl-tRNA synthetase (EC 6.1.1.19) (Argini... | 30 | 1.7 | 2 | GRT1_SCHPO (Q9C469) Zinc finger protein grt1 | 28 | 4.8 |
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>SYR_THEMA (Q9X0H8) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA| ligase) (ArgRS) Length = 546 Score = 30.0 bits (66), Expect = 1.7 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +1 Query: 88 HRLTNRLQYIANNYHTCLYKRIVHDPIPPSL 180 +RLTN LQ +A ++H K ++ DP P L Sbjct: 486 NRLTNYLQSLAESFHAFYTKHVIVDPENPEL 516
>GRT1_SCHPO (Q9C469) Zinc finger protein grt1| Length = 648 Score = 28.5 bits (62), Expect = 4.8 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -2 Query: 216 VGEEIRTLDWNS*RWWYWI 160 +GE +TLD NS R W+WI Sbjct: 416 IGEYCKTLDINSCREWFWI 434 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,549,480 Number of Sequences: 219361 Number of extensions: 494166 Number of successful extensions: 1300 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1291 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1299 length of database: 80,573,946 effective HSP length: 56 effective length of database: 68,289,730 effective search space used: 1638953520 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)