>SECE_BUCAI (P57152) Preprotein translocase secE subunit|
          Length = 127

 Score = 30.8 bits (68), Expect = 0.84
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +2

Query: 104 YHYRQNKQKVP*SPSWLSFSITPFFLIGDYL 196
           +HY +NK K+P    W+S SI  FF++  ++
Sbjct: 4   HHYNRNKHKIPEKVKWISISI--FFILSFFI 32

>GLGA2_ANASP (Q8Z0Q9) Probable glycogen synthase 2 (EC 2.4.1.21) (Starch|
           [bacterial glycogen] synthase 2)
          Length = 492

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = +1

Query: 193 SCSKPVAAWIGKTDNEK-IAVLHNCFELLLRRGSKLCGVDTTTKGG 327
           +  KP+ A+IG+ DN+K + ++H+     L +G++   + + T+ G
Sbjct: 296 AADKPIIAYIGRLDNQKGVHLVHHAIYHALNKGAQFVLLGSATEAG 341

>GLGA1_ANAVT (Q3M9U1) Glycogen synthase 1 (EC 2.4.1.21) (Starch [bacterial|
           glycogen] synthase 1)
          Length = 492

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = +1

Query: 193 SCSKPVAAWIGKTDNEK-IAVLHNCFELLLRRGSKLCGVDTTTKGG 327
           +  KP+ A+IG+ DN+K + ++H+     L +G++   + + T+ G
Sbjct: 296 AADKPIIAYIGRLDNQKGVHLVHHAIYHSLNKGAQFVLLGSATEAG 341

>SATT_HUMAN (P43007) Neutral amino acid transporter A (SATT)|
           (Alanine/serine/cysteine/ threonine transporter) (ASCT1)
          Length = 532

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 11/91 (12%)
 Frame = -2

Query: 302 PQSLLPRRRSNSKQLCKTAIFSLSVFPIHAATGL-----------LQDSHL*EKRELWRR 156
           P +   R R  +  L + A+  L+V  + A  GL            Q ++L    E+  R
Sbjct: 25  PGTAAGRARRCAGFLRRQALVLLTVSGVLAGAGLGAALRGLSLSRTQVTYLAFPGEMLLR 84

Query: 155 ITKMVIMELSVCFACSDSLVLCFFCLMRIGG 63
           + +M+I+ L VC   S +  L   CL R+GG
Sbjct: 85  MLRMIILPLVVCSLVSGAASLDASCLGRLGG 115

>KCM1_XENLA (Q91636) Kinesin central motor 1 (XKCM1)|
          Length = 730

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 256 HNCFELLLRRGSKLCGVDTTTKGGGQER 339
           H C +++LRRGSKL G  +     G ER
Sbjct: 475 HACLQIILRRGSKLHGKFSLVDLAGNER 502

>CLAT_RAT (P32738) Choline O-acetyltransferase (EC 2.3.1.6) (CHOACTase)|
           (Choline acetylase) (ChAT)
          Length = 639

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = -2

Query: 275 SNSKQLCKTAIFSLSVFPIHAATGLLQDSHL*EKRELWRRITK 147
           S   QL +TA+ +   + + A TG+  D+HL   REL R + K
Sbjct: 485 SEKLQLLQTAMQAHKQYTVMAITGMAIDNHLLALRELARDLCK 527

>INLA_LISMF (Q723K6) Internalin A precursor|
          Length = 800

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 42  PYRTWNSPSNSH*TEKTQNQTITTGKTNRKF 134
           P  TWN PS ++    T NQ++T GK    F
Sbjct: 456 PDITWNLPSYTNEVSYTFNQSVTIGKGTTTF 486

>LHR_ECOLI (P30015) Probable ATP-dependent helicase lhr (EC 3.6.1.-) (Large|
           helicase-related protein)
          Length = 1538

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 14/57 (24%), Positives = 32/57 (56%)
 Frame = -2

Query: 353 KENIILSCPPPFVVVSTPQSLLPRRRSNSKQLCKTAIFSLSVFPIHAATGLLQDSHL 183
           +E   L+  PP ++++TP+SL     S +++  +  + ++ +  +HA  G  + +HL
Sbjct: 138 QERSKLTRNPPDILITTPESLYLMLTSRARETLR-GVETVIIDEVHAVAGSKRGAHL 193

>CLAT_MOUSE (Q03059) Choline O-acetyltransferase (EC 2.3.1.6) (CHOACTase)|
           (Choline acetylase) (ChAT)
          Length = 640

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = -2

Query: 275 SNSKQLCKTAIFSLSVFPIHAATGLLQDSHL*EKRELWRRITK 147
           S   QL + AI + + + + A TG+  D+HL   REL R + K
Sbjct: 486 SEKLQLLQRAIQAQTEYTVMAITGMAIDNHLLALRELARDLCK 528

>CLAT_HUMAN (P28329) Choline O-acetyltransferase (EC 2.3.1.6) (CHOACTase)|
           (Choline acetylase) (ChAT)
          Length = 748

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -2

Query: 260 LCKTAIFSLSVFPIHAATGLLQDSHL*EKRELWRRITK 147
           L K AI + + + + A TG+  D+HL   REL R + K
Sbjct: 599 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCK 636

>ARCD_PSEAE (P18275) Arginine/ornithine antiporter|
          Length = 482

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
 Frame = +2

Query: 65  LQFSLNRKNTEPNYHYRQNKQKVP*SPSWLS------FSITPFFLIGD 190
           + F+  + +T P +  R+N  +VP +  WL+      F +  FF  GD
Sbjct: 308 IMFAAAKDHTMPEFLRRENANQVPANALWLTNICVQVFLVVVFFTSGD 355

>CLAT_PIG (P13222) Choline O-acetyltransferase (EC 2.3.1.6) (CHOACTase)|
           (Choline acetylase) (ChAT)
          Length = 640

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -2

Query: 260 LCKTAIFSLSVFPIHAATGLLQDSHL*EKRELWRRITK 147
           L K AI + + + + A TG+  D+HL   REL R + K
Sbjct: 491 LLKDAIRAQTQYTVMAITGMAIDNHLLGLRELAREVCK 528

>PSD5_HUMAN (Q16401) 26S proteasome non-ATPase regulatory subunit 5 (26S|
           proteasome subunit S5B) (26S protease subunit S5 basic)
          Length = 503

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -1

Query: 99  GSVFFLFNENWRVNSTSCKEIVDSVMQSTPSV 4
           G +F L NEN R  +T C  I++ ++Q+   V
Sbjct: 46  GPLFSLLNENHREKTTLCVSILERLLQAMEPV 77

>PFA5_EMENI (Q5B433) Palmitoyltransferase pfa5 (EC 2.3.1.-) (Protein fatty|
           acyltransferase 5)
          Length = 474

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
 Frame = -3

Query: 292 CCLAGGVIQSSCAR--LQFFHYLSFQSMLLQACCKIVTYEKKGSYGEG*PRW 143
           C   GGV+  +  +  +QF  Y +   M +   C I T E +   G+  P W
Sbjct: 202 CPWVGGVVSETSFKFFIQFVFYTALFCMTVLIVCAIYTAELRQDTGDVNPHW 253

>MTMRD_XENLA (Q6NTN5) Myotubularin-related protein 13 (SET-binding factor 2)|
          Length = 1873

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 17/48 (35%), Positives = 19/48 (39%)
 Frame = +2

Query: 86  KNTEPNYHYRQNKQKVP*SPSWLSFSITPFFLIGDYLAASL*QHGLER 229
           KN  PN H    K   P   S L   I PF  + D     L Q GL +
Sbjct: 464 KNENPNPHMAFQKVPKPTEGSHLRVHILPFSKMNDLKVQELIQEGLNK 511


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,286,353
Number of Sequences: 219361
Number of extensions: 1108692
Number of successful extensions: 2564
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2564
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)