ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl12h07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ175866.1| Hordeum vulgare clone DsD5 Ds insertion site flan... 44 0.31
2gb|DQ175850.1| Hordeum vulgare clone DsC13 Ds insertion site fla... 44 0.31
3gb|DQ175849.1| Hordeum vulgare clone DsC11 Ds insertion site fla... 44 0.31
4gb|DQ175839.1| Hordeum vulgare clone DsB44 Ds insertion site fla... 44 0.31
5gb|U97011.3| Caenorhabditis elegans cosmid F31F7, complete sequence 42 1.2
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.2
7gb|U97001.2| Caenorhabditis elegans cosmid K08B12, complete sequ... 42 1.2
8gb|AC157733.2| Xenopus tropicalis clone ISB1-355J23, complete se... 42 1.2
9gb|AF051934.2|AF051934 Homo sapiens chromosome 21 clone PAC 220P... 42 1.2
10gb|AC122149.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.2
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
12gb|AF193439.1|AF193439 Lycopersicon esculentum glutathione S-tra... 42 1.2
13dbj|BS000196.1| Pan troglodytes chromosome 22 clone:RP43-025M10,... 42 1.2
14dbj|AP001301.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 42 1.2
15emb|AJ229042.1|HS229042 Homo sapiens 959 kb contig between AML1 ... 42 1.2
16emb|AL163268.2|HS21C068 Homo sapiens chromosome 21 segment HS21C068 42 1.2
17gb|AC147983.3| Mus musculus BAC clone RP24-401J11 from chromosom... 40 4.9
18gb|AC145970.2| Pan troglodytes BAC clone RP43-17L12 from 7, comp... 40 4.9
19gb|AC107837.11| Mus musculus chromosome 1, clone RP23-272H13, co... 40 4.9
20emb|CT027658.2| Macaca mulatta chromosome 9 BAC CH250-8G3, compl... 40 4.9
21gb|AC100724.10| Mus musculus chromosome 17, clone RP24-120E11, c... 40 4.9
22gb|AC121822.3| Mus musculus BAC clone RP23-465H5 from chromosome... 40 4.9
23gb|AC122245.5| Mus musculus BAC clone RP23-151P21 from 18, compl... 40 4.9
24emb|BX571713.11| Zebrafish DNA sequence from clone DKEY-19H21 in... 40 4.9
25gb|AC124108.15| Mus musculus chromosome 1, clone RP24-340N18, co... 40 4.9
26emb|Z97630.11|HS466N1 Human DNA sequence from clone RP3-466N1 on... 40 4.9
27emb|AL354709.15| Human DNA sequence from clone RP11-145E5 on chr... 40 4.9
28emb|AL354889.14| Human DNA sequence from clone RP11-290F20 on ch... 40 4.9
29emb|AL136324.6| Human DNA sequence from clone RP5-944H6 on chrom... 40 4.9
30emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4,... 40 4.9
31emb|BX936331.6| Zebrafish DNA sequence from clone CH211-1C10 in ... 40 4.9
32emb|BX572620.15| Zebrafish DNA sequence from clone CH211-202G13 ... 40 4.9
33gb|AC093566.3| Homo sapiens chromosome 8, clone CTD-2017M22, com... 40 4.9
34gb|AC093289.2| Homo sapiens chromosome 5 clone RP11-473L15, comp... 40 4.9
35gb|AF274567.1|AF274567 Paramecium primaurelia G surface antigen ... 40 4.9
36dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
37dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
38dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
39gb|AC008192.8|AC008192 Drosophila melanogaster, chromosome 3R, r... 40 4.9
40gb|AC154621.2| Mus musculus BAC clone RP23-323P15 from chromosom... 40 4.9
41gb|AC078875.37| Homo sapiens 12 BAC RP11-614L17 (Roswell Park Ca... 40 4.9
42dbj|AP002537.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
43dbj|AP003417.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
44gb|AC108670.10| Homo sapiens 3 BAC RP11-218A22 (Roswell Park Can... 40 4.9
45dbj|AP004732.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
46dbj|AP004280.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
47dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
48gb|AC007053.15|AC007053 Drosophila melanogaster, chromosome 3R, ... 40 4.9
49gb|AE003726.3| Drosophila melanogaster chromosome 3R, section 64... 40 4.9
50gb|AC154211.1| Mus musculus BAC clone RP24-113P8 from 17, comple... 40 4.9
51gb|BC067641.1| Danio rerio signal recognition particle 72, mRNA ... 40 4.9
52dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome 40 4.9
53emb|AL671893.7| Mouse DNA sequence from clone RP23-170G19 on chr... 40 4.9
54emb|X03882.1|PPSGP Paramecium primaurelia gene for G surface pro... 40 4.9
55emb|X52133.1|PP168G Paramecium 168G gene for 168G surface protein 40 4.9
56emb|AL611947.11| Mouse DNA sequence from clone RP23-319H15 on ch... 40 4.9 
>gb|DQ175866.1| Hordeum vulgare clone DsD5 Ds insertion site flanking region
          genomic sequence
          Length = 629

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  ccggacggagggagtactttgc 22
          ||||||||||||||||||||||
Sbjct: 35 ccggacggagggagtactttgc 56
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>gb|DQ175850.1| Hordeum vulgare clone DsC13 Ds insertion site flanking region
           genomic sequence
          Length = 654

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 1   ccggacggagggagtactttgc 22
           ||||||||||||||||||||||
Sbjct: 559 ccggacggagggagtactttgc 580
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>gb|DQ175849.1| Hordeum vulgare clone DsC11 Ds insertion site flanking region
           genomic sequence
          Length = 603

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 1   ccggacggagggagtactttgc 22
           ||||||||||||||||||||||
Sbjct: 252 ccggacggagggagtactttgc 273
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>gb|DQ175839.1| Hordeum vulgare clone DsB44 Ds insertion site flanking region
          genomic sequence
          Length = 628

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  ccggacggagggagtactttgc 22
          ||||||||||||||||||||||
Sbjct: 1  ccggacggagggagtactttgc 22
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>gb|U97011.3| Caenorhabditis elegans cosmid F31F7, complete sequence
          Length = 18210

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 339  aataatattttcctttccatg 359
            |||||||||||||||||||||
Sbjct: 5845 aataatattttcctttccatg 5865
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 3       ggacggagggagtactttgca 23
               |||||||||||||||||||||
Sbjct: 2402524 ggacggagggagtactttgca 2402544
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>gb|U97001.2| Caenorhabditis elegans cosmid K08B12, complete sequence
          Length = 37679

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 339   aataatattttcctttccatg 359
             |||||||||||||||||||||
Sbjct: 36123 aataatattttcctttccatg 36143
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>gb|AC157733.2| Xenopus tropicalis clone ISB1-355J23, complete sequence
          Length = 82312

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 145   atcttggttatccttctccat 165
             |||||||||||||||||||||
Sbjct: 35053 atcttggttatccttctccat 35073
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>gb|AF051934.2|AF051934 Homo sapiens chromosome 21 clone PAC 220P20 map 21q22.2, complete
             sequence
          Length = 144474

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 332   aagagagaataatattttcct 352
             |||||||||||||||||||||
Sbjct: 75014 aagagagaataatattttcct 75034
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>gb|AC122149.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083D24,
              complete sequence
          Length = 150503

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 3      ggacggagggagtactttgca 23
              |||||||||||||||||||||
Sbjct: 119366 ggacggagggagtactttgca 119386
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 3       ggacggagggagtactttgca 23
               |||||||||||||||||||||
Sbjct: 2402634 ggacggagggagtactttgca 2402654
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>gb|AF193439.1|AF193439 Lycopersicon esculentum glutathione S-transferase/peroxidase
           (BI-GST/GPX) mRNA, complete cds
          Length = 739

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 313 acaacaaagggaggagggcaagaga 337
           |||||||||||||||| ||||||||
Sbjct: 351 acaacaaagggaggagagcaagaga 375
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>dbj|BS000196.1| Pan troglodytes chromosome 22 clone:RP43-025M10, map 22, complete
              sequences
          Length = 196989

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 332    aagagagaataatattttcct 352
              |||||||||||||||||||||
Sbjct: 174604 aagagagaataatattttcct 174624
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>dbj|AP001301.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F8N14
          Length = 68639

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 137   tgatcaccatcttggttatcc 157
             |||||||||||||||||||||
Sbjct: 44340 tgatcaccatcttggttatcc 44360
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>emb|AJ229042.1|HS229042 Homo sapiens 959 kb contig between AML1 and CBR1 on chromosome 21q22,
              segment 2/3
          Length = 348050

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 332    aagagagaataatattttcct 352
              |||||||||||||||||||||
Sbjct: 155568 aagagagaataatattttcct 155548
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>emb|AL163268.2|HS21C068 Homo sapiens chromosome 21 segment HS21C068
          Length = 340000

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 332   aagagagaataatattttcct 352
             |||||||||||||||||||||
Sbjct: 43509 aagagagaataatattttcct 43529
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>gb|AC147983.3| Mus musculus BAC clone RP24-401J11 from chromosome 17, complete sequence
          Length = 157958

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 320    agggaggagggcaagagaga 339
              ||||||||||||||||||||
Sbjct: 129845 agggaggagggcaagagaga 129864
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>gb|AC145970.2| Pan troglodytes BAC clone RP43-17L12 from 7, complete sequence
          Length = 182677

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 82     cagaaaaaacacagaaccaa 101
              ||||||||||||||||||||
Sbjct: 112505 cagaaaaaacacagaaccaa 112524
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>gb|AC107837.11| Mus musculus chromosome 1, clone RP23-272H13, complete sequence
          Length = 189415

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 323    gaggagggcaagagagaataatat 346
              |||||||||||||||| |||||||
Sbjct: 161107 gaggagggcaagagaggataatat 161130
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>emb|CT027658.2| Macaca mulatta chromosome 9 BAC CH250-8G3, complete sequence
          Length = 148950

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 247   gcagtcttgcacaactgctttgaa 270
             |||||||||||||| |||||||||
Sbjct: 11943 gcagtcttgcacaagtgctttgaa 11966
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>gb|AC100724.10| Mus musculus chromosome 17, clone RP24-120E11, complete sequence
          Length = 179334

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 10     gggagtactttgcataacagaatc 33
              ||||||||||||||||| ||||||
Sbjct: 160329 gggagtactttgcataaaagaatc 160352
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>gb|AC121822.3| Mus musculus BAC clone RP23-465H5 from chromosome 17, complete sequence
          Length = 197213

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 320    agggaggagggcaagagaga 339
              ||||||||||||||||||||
Sbjct: 175966 agggaggagggcaagagaga 175947
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>gb|AC122245.5| Mus musculus BAC clone RP23-151P21 from 18, complete sequence
          Length = 191988

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     taaacagaaaaaacacagaa 97
              ||||||||||||||||||||
Sbjct: 148060 taaacagaaaaaacacagaa 148079
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>emb|BX571713.11| Zebrafish DNA sequence from clone DKEY-19H21 in linkage group 9,
             complete sequence
          Length = 103882

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   acaggcaaaacaaacagaaa 130
             ||||||||||||||||||||
Sbjct: 88235 acaggcaaaacaaacagaaa 88254
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>gb|AC124108.15| Mus musculus chromosome 1, clone RP24-340N18, complete sequence
          Length = 178775

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 323    gaggagggcaagagagaataatat 346
              |||||||||||||||| |||||||
Sbjct: 157678 gaggagggcaagagaggataatat 157655
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>emb|Z97630.11|HS466N1 Human DNA sequence from clone RP3-466N1 on chromosome 22q12-13,
             complete sequence
          Length = 79528

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 79    aaacagaaaaaacacagaaccaaa 102
             ||||||||||||||||||| ||||
Sbjct: 62337 aaacagaaaaaacacagaaacaaa 62314
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>emb|AL354709.15| Human DNA sequence from clone RP11-145E5 on chromosome 9 Contains the
             5' end of the CDKN2B gene for cyclin-dependent kinase
             inhibitor 2B (p15, inhibits CDK4), a ubiquitin A-52
             residue ribosomal protein fusion product 1 (UBA52) (RPL40)
             pseudogene, the 3' end of a variant of the MTAP gene for
             methylthioadenosine phosphorylase (MSAP), a novel gene and
             a CpG island, complete sequence
          Length = 157533

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 247   gcagtcttgcacaactgctttgaa 270
             |||||||||||||| |||||||||
Sbjct: 29581 gcagtcttgcacaagtgctttgaa 29604
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>emb|AL354889.14| Human DNA sequence from clone RP11-290F20 on chromosome 20 Contains
             three novel genes, complete sequence
          Length = 160311

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 332   aagagagaataatattttcc 351
             ||||||||||||||||||||
Sbjct: 87217 aagagagaataatattttcc 87198
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>emb|AL136324.6| Human DNA sequence from clone RP5-944H6 on chromosome 1p22.3-31.2
             Contains the 3' end of the PTGFR gene for prostaglandin,
             complete sequence
          Length = 135758

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 232   gataatgaaaaaattgcagt 251
             ||||||||||||||||||||
Sbjct: 94397 gataatgaaaaaattgcagt 94378
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>emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L24,
              complete sequence
          Length = 164577

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      gacggagggagtactttgca 23
              ||||||||||||||||||||
Sbjct: 135816 gacggagggagtactttgca 135797
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>emb|BX936331.6| Zebrafish DNA sequence from clone CH211-1C10 in linkage group 3,
             complete sequence
          Length = 163806

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 108   actacaggcaaaacaaacagaaag 131
             ||||||||||||||||||| ||||
Sbjct: 37252 actacaggcaaaacaaacacaaag 37275
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>emb|BX572620.15| Zebrafish DNA sequence from clone CH211-202G13 in linkage group 3,
             complete sequence
          Length = 199512

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 108   actacaggcaaaacaaacagaaag 131
             ||||||||||||||||||| ||||
Sbjct: 34338 actacaggcaaaacaaacacaaag 34361
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>gb|AC093566.3| Homo sapiens chromosome 8, clone CTD-2017M22, complete sequence
          Length = 177522

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    tccttctccataactccctt 174
              ||||||||||||||||||||
Sbjct: 107097 tccttctccataactccctt 107116
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>gb|AC093289.2| Homo sapiens chromosome 5 clone RP11-473L15, complete sequence
          Length = 159956

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 220   attggaaagacagataatgaaaaa 243
             |||||||||||||||| |||||||
Sbjct: 36926 attggaaagacagatattgaaaaa 36949
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>gb|AF274567.1|AF274567 Paramecium primaurelia G surface antigen pseudogene, complete
            sequence
          Length = 7744

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 252  cttgcacaactgctttgaat 271
            ||||||||||||||||||||
Sbjct: 6165 cttgcacaactgctttgaat 6184
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 4        gacggagggagtactttgca 23
                ||||||||||||||||||||
Sbjct: 25409258 gacggagggagtactttgca 25409239
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 3        ggacggagggagtactttgc 22
                ||||||||||||||||||||
Sbjct: 14448240 ggacggagggagtactttgc 14448259



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 3       ggacggagggagtactttgc 22
               ||||||||||||||||||||
Sbjct: 4793027 ggacggagggagtactttgc 4793008
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 3       ggacggagggagtactttgc 22
               ||||||||||||||||||||
Sbjct: 5129668 ggacggagggagtactttgc 5129649
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>gb|AC008192.8|AC008192 Drosophila melanogaster, chromosome 3R, region 92A-92A, BAC clone
              BACR12P10, complete sequence
          Length = 186686

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 220    attggaaagacagataatgaaaaa 243
              |||||||| |||||||||||||||
Sbjct: 170313 attggaaaaacagataatgaaaaa 170336
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>gb|AC154621.2| Mus musculus BAC clone RP23-323P15 from chromosome 14, complete sequence
          Length = 211243

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    aaacagaaagttccatgatc 141
              ||||||||||||||||||||
Sbjct: 113295 aaacagaaagttccatgatc 113314
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>gb|AC078875.37| Homo sapiens 12 BAC RP11-614L17 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 60209

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 340   ataatattttcctttccatg 359
             ||||||||||||||||||||
Sbjct: 31041 ataatattttcctttccatg 31022
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>dbj|AP002537.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0001B06
          Length = 140304

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      ggacggagggagtactttgc 22
              ||||||||||||||||||||
Sbjct: 123106 ggacggagggagtactttgc 123087
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>dbj|AP003417.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0498B01
          Length = 146812

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     ggacggagggagtactttgc 22
             ||||||||||||||||||||
Sbjct: 61699 ggacggagggagtactttgc 61680
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>gb|AC108670.10| Homo sapiens 3 BAC RP11-218A22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 163157

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 222   tggaaagacagataatgaaa 241
             ||||||||||||||||||||
Sbjct: 97782 tggaaagacagataatgaaa 97763
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>dbj|AP004732.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0021M10
          Length = 163416

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     ggacggagggagtactttgc 22
             ||||||||||||||||||||
Sbjct: 41414 ggacggagggagtactttgc 41433
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>dbj|AP004280.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0648E08
          Length = 135175

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     ggacggagggagtactttgc 22
             ||||||||||||||||||||
Sbjct: 68431 ggacggagggagtactttgc 68412
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>dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0698A06
          Length = 156514

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      ggacggagggagtactttgc 22
              ||||||||||||||||||||
Sbjct: 155626 ggacggagggagtactttgc 155607
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>gb|AC007053.15|AC007053 Drosophila melanogaster, chromosome 3R, region 92A1-92A2, BAC clone
              BACR48K23, complete sequence
          Length = 173564

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    acaggcaaaacaaacagaaa 130
              ||||||||||||||||||||
Sbjct: 117834 acaggcaaaacaaacagaaa 117853
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>gb|AE003726.3| Drosophila melanogaster chromosome 3R, section 64 of 118 of the complete
              sequence
          Length = 247876

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 220    attggaaagacagataatgaaaaa 243
              |||||||| |||||||||||||||
Sbjct: 228472 attggaaaaacagataatgaaaaa 228495



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   acaggcaaaacaaacagaaa 130
             ||||||||||||||||||||
Sbjct: 13296 acaggcaaaacaaacagaaa 13315
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>gb|AC154211.1| Mus musculus BAC clone RP24-113P8 from 17, complete sequence
          Length = 146732

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 10     gggagtactttgcataacagaatc 33
              ||||||||||||||||| ||||||
Sbjct: 134923 gggagtactttgcataaaagaatc 134900
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>gb|BC067641.1| Danio rerio signal recognition particle 72, mRNA (cDNA clone
            IMAGE:6962108), partial cds
          Length = 2416

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 112  caggcaaaacaaacagaaag 131
            ||||||||||||||||||||
Sbjct: 2233 caggcaaaacaaacagaaag 2214
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>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome
          Length = 4303871

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 172     cttttttctcataggtgact 191
               ||||||||||||||||||||
Sbjct: 1714382 cttttttctcataggtgact 1714363
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>emb|AL671893.7| Mouse DNA sequence from clone RP23-170G19 on chromosome X, complete
             sequence
          Length = 175057

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   atcactacaggcaaaacaaa 124
             ||||||||||||||||||||
Sbjct: 73694 atcactacaggcaaaacaaa 73713
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>emb|X03882.1|PPSGP Paramecium primaurelia gene for G surface protein
          Length = 8548

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 252  cttgcacaactgctttgaat 271
            ||||||||||||||||||||
Sbjct: 6859 cttgcacaactgctttgaat 6878
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>emb|X52133.1|PP168G Paramecium 168G gene for 168G surface protein
          Length = 8511

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 252  cttgcacaactgctttgaat 271
            ||||||||||||||||||||
Sbjct: 6821 cttgcacaactgctttgaat 6840
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>emb|AL611947.11| Mouse DNA sequence from clone RP23-319H15 on chromosome 4, complete
             sequence
          Length = 64760

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   acaggcaaaacaaacagaaa 130
             ||||||||||||||||||||
Sbjct: 40763 acaggcaaaacaaacagaaa 40782


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,026,369
Number of Sequences: 3902068
Number of extensions: 5026369
Number of successful extensions: 134428
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 133463
Number of HSP's gapped (non-prelim): 965
length of query: 369
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 347
effective length of database: 17,147,199,772
effective search space: 5950078320884
effective search space used: 5950078320884
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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