>gb|BT009262.1| Triticum aestivum clone wlk4.pk0022.b7:fis, full insert mRNA sequence
          Length = 2997

 Score =  168 bits (85), Expect = 7e-39
 Identities = 100/105 (95%)
 Strand = Plus / Minus

                                                                        
Query: 113  tagtcactaccgcgtttctcaaccatgcacaccactgcgcttattaactgtcccacaact 172
            |||||||||||| | ||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 2712 tagtcactaccgtggttctcaaccatgcacaccactgcgcttattaacagtcccgcaact 2653

                                                         
Query: 173  ataacaacctgctattttctgaaacacaagttctgaatcaccaaa 217
            |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2652 ataacagcctgctattttctgaaacacaagttctgaatcaccaaa 2608



 Score =  111 bits (56), Expect = 1e-21
 Identities = 62/64 (96%)
 Strand = Plus / Minus

                                                                        
Query: 4    caactaaacattgacaatttataattaaacagtaatacaaacatcagaaaccgtgtaaag 63
            ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 2787 caactaaacattgacaatttataattaaacagtgatacaaacagcagaaaccgtgtaaag 2728

                
Query: 64   tatc 67
            ||||
Sbjct: 2727 tatc 2724



 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                          
Query: 261  atctatgtggtgaggatggngggaaggtagtccgactcggtgccga 306
            ||||||||||||||||||| ||||||||||||||||| || |||||
Sbjct: 2571 atctatgtggtgaggatggggggaaggtagtccgacttggcgccga 2526

>gb|AC006663.1| Caenorhabditis elegans fosmid H24K24, complete sequence
          Length = 32209

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 34    agtaatacaaacatcagaaacc 55
             ||||||||||||||||||||||
Sbjct: 22145 agtaatacaaacatcagaaacc 22166

>emb|CR391935.9| Zebrafish DNA sequence from clone DKEY-256K13 in linkage group 23,
             complete sequence
          Length = 197191

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 18    caatttataattaaacagtaat 39
             ||||||||||||||||||||||
Sbjct: 66507 caatttataattaaacagtaat 66486

>emb|BX469903.9| Zebrafish DNA sequence from clone CH211-46H12 in linkage group 23,
             complete sequence
          Length = 175747

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 18    caatttataattaaacagtaat 39
             ||||||||||||||||||||||
Sbjct: 92895 caatttataattaaacagtaat 92874

>ref|NM_070954.2| Caenorhabditis elegans H24K24.2 (H24K24.2) mRNA, complete cds
          Length = 1473

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 34  agtaatacaaacatcagaaacc 55
           ||||||||||||||||||||||
Sbjct: 469 agtaatacaaacatcagaaacc 490

>emb|BX548247.6| Zebrafish DNA sequence from clone DKEY-177G18 in linkage group 23,
              complete sequence
          Length = 180406

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 26     aattaaacagtaatacaaaca 46
              |||||||||||||||||||||
Sbjct: 131290 aattaaacagtaatacaaaca 131270

>gb|AY109642.1| Zea mays CL1830_1 mRNA sequence
          Length = 2876

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 262  tctatgtggtgaggatggngggaaggtagtccgact 297
            ||||||||||||||||||  || ||||| |||||||
Sbjct: 2546 tctatgtggtgaggatgggcgggaggtaatccgact 2511

>gb|AY105267.1| Zea mays PCO139922 mRNA sequence
          Length = 541

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 263 ctatgtggtgaggatggngggaaggtagtccgactcggtgccga 306
           |||||||||||||||||  || ||||| ||||||| | ||||||
Sbjct: 353 ctatgtggtgaggatgggcgggaggtaatccgacttgttgccga 396

>dbj|D73410.1|MZEPHD1 Zea mays mRNA for phospholipase D, complete cds
          Length = 2793

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 262  tctatgtggtgaggatggngggaaggtagtccgact 297
            ||||||||||||||||||  || ||||| |||||||
Sbjct: 2546 tctatgtggtgaggatgggcgggaggtaatccgact 2511

>gb|AC132454.3| Mus musculus BAC clone RP23-127P22 from chromosome 19, complete sequence
          Length = 225152

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 188    tttctgaaacacaagttctg 207
              ||||||||||||||||||||
Sbjct: 136964 tttctgaaacacaagttctg 136945

>gb|AC127316.3| Mus musculus BAC clone RP23-222G16 from 13, complete sequence
          Length = 203032

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     tttataattaaacagtaata 40
              ||||||||||||||||||||
Sbjct: 123470 tttataattaaacagtaata 123451

>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023
          Length = 2661830

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 59      taaagtatccaagtctcatattac 82
               |||| |||||||||||||||||||
Sbjct: 2285010 taaactatccaagtctcatattac 2284987

>gb|AC008914.7| Homo sapiens chromosome 5 clone CTD-2270I16, complete sequence
          Length = 139677

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    aatttataattaaacagtaa 38
             ||||||||||||||||||||
Sbjct: 36426 aatttataattaaacagtaa 36445

>gb|AC009229.5| Homo sapiens BAC clone RP11-314C9 from 2, complete sequence
          Length = 209156

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 264   tatgtggtgaggatggngggaag 286
             |||||||||||||||| ||||||
Sbjct: 92801 tatgtggtgaggatggggggaag 92779

>gb|AC016632.7| Homo sapiens chromosome 5 clone RP11-175M2, complete sequence
          Length = 177185

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    aatttataattaaacagtaa 38
             ||||||||||||||||||||
Sbjct: 12231 aatttataattaaacagtaa 12212

>emb|BX908754.8| Zebrafish DNA sequence from clone DKEY-196D8 in linkage group 18,
             complete sequence
          Length = 94961

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 171   ctataacaacctgctattttctga 194
             |||||||| |||||||||||||||
Sbjct: 39144 ctataacaccctgctattttctga 39167

>gb|AY111616.1| Zea mays CL18897_1 mRNA sequence
          Length = 676

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 26 aattaaacagtaatacaaac 45
          ||||||||||||||||||||
Sbjct: 73 aattaaacagtaatacaaac 92

>gb|AY294150.1| Platyamoeba placida small subunit ribosomal RNA gene, partial
           sequence
          Length = 1893

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 206 tgaatcaccaaaggaaccac 225
           ||||||||||||||||||||
Sbjct: 238 tgaatcaccaaaggaaccac 219


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,605,327
Number of Sequences: 3902068
Number of extensions: 2605327
Number of successful extensions: 57795
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57767
Number of HSP's gapped (non-prelim): 28
length of query: 306
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 284
effective length of database: 17,147,199,772
effective search space: 4869804735248
effective search space used: 4869804735248
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)