Clone Name | rbastl12h02 |
---|---|
Clone Library Name | barley_pub |
>emb|Z95331.2|HS941F9 Human DNA sequence from clone CTA-941F9 on chromosome 22q13, complete sequence Length = 127587 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Minus Query: 198 ccttcaactacctgttcaaatg 219 |||||||||||||||||||||| Sbjct: 116078 ccttcaactacctgttcaaatg 116057
>gb|AC106779.3| Homo sapiens chromosome 16 clone RP11-343H19, complete sequence Length = 158297 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Minus Query: 87 atgaaaagtggcagttttcttg 108 |||||||||||||||||||||| Sbjct: 92561 atgaaaagtggcagttttcttg 92540
>dbj|AB051572.1| Aphis gossypii mRNA for GrpE, complete cds Length = 881 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Minus Query: 197 accttcaactacctgttcaaat 218 |||||||||||||||||||||| Sbjct: 666 accttcaactacctgttcaaat 645
>emb|AL646090.5| Human DNA sequence from clone RP11-542F9 on chromosome 6 Contains a novel gene, complete sequence Length = 88711 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 aacaagacagacatggttcca 158 ||||||||||||||||||||| Sbjct: 87086 aacaagacagacatggttcca 87106
>emb|AL593844.4| Human DNA sequence from clone RP11-406O16 on chromosome 6 Contains the 3' part of a novel gene, complete sequence Length = 157929 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 aacaagacagacatggttcca 158 ||||||||||||||||||||| Sbjct: 375 aacaagacagacatggttcca 395
>gb|AC019306.10| Homo sapiens chromosome 18, clone RP11-326M20, complete sequence Length = 175840 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 aaacaagacagacatggttcc 157 ||||||||||||||||||||| Sbjct: 10044 aaacaagacagacatggttcc 10064
>gb|AC007768.5| Homo sapiens chromosome 18, clone RP11-540M4, complete sequence Length = 175579 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 aaacaagacagacatggttcc 157 ||||||||||||||||||||| Sbjct: 97179 aaacaagacagacatggttcc 97199
>gb|DQ011272.1| Oikopleura dioica eyes absent (eya) gene, complete cds Length = 43001 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 gcagttttcttgaattttga 116 |||||||||||||||||||| Sbjct: 35618 gcagttttcttgaattttga 35599
>emb|BX005379.9| Zebrafish DNA sequence from clone DKEY-184P9 in linkage group 21, complete sequence Length = 185814 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 taaatcatgaaaagtggcagtttt 104 |||||||| ||||||||||||||| Sbjct: 154062 taaatcataaaaagtggcagtttt 154085
>emb|BX649331.16| Zebrafish DNA sequence from clone DKEY-12N3 in linkage group 11, complete sequence Length = 252675 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cttgaattttgacacacaca 124 |||||||||||||||||||| Sbjct: 38706 cttgaattttgacacacaca 38725
>gb|AC009260.13| Homo sapiens 12 BAC RP11-435A10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 99727 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 acagccttggatttagtaataaat 85 |||||||||||||| ||||||||| Sbjct: 11641 acagccttggattttgtaataaat 11618
>gb|AC018992.6| Homo sapiens chromosome 8, clone RP11-468O2, complete sequence Length = 151712 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 aacaagacagacatggttcc 157 |||||||||||||||||||| Sbjct: 138418 aacaagacagacatggttcc 138399
>emb|BX465211.8| Zebrafish DNA sequence from clone CH211-142D23 in linkage group 17, complete sequence Length = 173690 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 ttagtaataaatcatgaaaa 93 |||||||||||||||||||| Sbjct: 121635 ttagtaataaatcatgaaaa 121616
>gb|AC024882.1| Caenorhabditis elegans cosmid Y9C9A, complete sequence Length = 66569 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 gatgaattcttgaaaattaagcga 32 ||||||||||||||||| |||||| Sbjct: 60014 gatgaattcttgaaaatgaagcga 60037
>gb|AC013602.4|AC013602 Homo sapiens, clone RP11-10C6, complete sequence Length = 152770 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 aacaagacagacatggttcc 157 |||||||||||||||||||| Sbjct: 111271 aacaagacagacatggttcc 111252
>gb|AC079283.4|AC079283 Arabidopsis thaliana chromosome 1 BAC F7O12 genomic sequence, complete sequence Length = 39456 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 tggatttagtaataaatcatgaaa 92 ||||||||||||| |||||||||| Sbjct: 9978 tggatttagtaatgaatcatgaaa 10001
>gb|AC069550.4|AC069550 Sequence of chromosome 2 clone RP11-471B2 containing Homo sapiens NRXNI gene, partial cds, complete sequence Length = 166054 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 aacaagacagacatggttcc 157 |||||||||||||||||||| Sbjct: 140103 aacaagacagacatggttcc 140122
>gb|AC068228.8| Homo sapiens chromosome 8, clone RP11-539E17, complete sequence Length = 200622 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 aacaagacagacatggttcc 157 |||||||||||||||||||| Sbjct: 96245 aacaagacagacatggttcc 96264
>gb|AC103681.4| Homo sapiens chromosome 11, clone CTD-2560E9, complete sequence Length = 215485 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 aacaagacagacatggttcc 157 |||||||||||||||||||| Sbjct: 98729 aacaagacagacatggttcc 98710
>gb|AF254136.3| Homo sapiens chromosome 8 clone RP11-386F22, RP11-820H12 map q24.2, complete sequence Length = 184865 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 aacaagacagacatggttcc 157 |||||||||||||||||||| Sbjct: 159177 aacaagacagacatggttcc 159196
>gb|AC104430.3| Homo sapiens chromosome 8 clone RP11-391E1 map 8q24.2, complete sequence Length = 170376 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 aacaagacagacatggttcc 157 |||||||||||||||||||| Sbjct: 34385 aacaagacagacatggttcc 34404 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,657,863 Number of Sequences: 3902068 Number of extensions: 2657863 Number of successful extensions: 57220 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 21 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 57196 Number of HSP's gapped (non-prelim): 24 length of query: 247 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 225 effective length of database: 17,147,199,772 effective search space: 3858119948700 effective search space used: 3858119948700 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)