>SRCH_HUMAN (P23327) Sarcoplasmic reticulum histidine-rich calcium-binding|
           protein precursor
          Length = 699

 Score = 33.9 bits (76), Expect = 0.10
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
 Frame = +1

Query: 184 HPVREAGQPAEEVDGRGG---HGVPEHGMAEVVEPAGHRHHLGRHRIQRH 324
           H V + G   EEV    G    G   HG  +  + A HRHHL  HR   H
Sbjct: 111 HKVGDEGVSGEEVFAEHGGQARGHRGHGSEDTEDSAEHRHHLPSHRSHSH 160

>GP156_RAT (Q8K451) Probable G-protein coupled receptor 156 (GABAB-related|
           G-protein coupled receptor)
          Length = 792

 Score = 30.8 bits (68), Expect = 0.89
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = -2

Query: 281 AGSTTSAIPC-SGTPCPPRPSTS----SAGCPASRTGCFEIDEQSN 159
           A + +S  PC S  P  PR        S GCP+  +GC+ +D +S+
Sbjct: 682 APAQSSTAPCLSSXPALPRQRQPLPLLSPGCPSLSSGCYNLDSESS 727

>TOP1P_XYLFA (Q9PHK2) DNA topoisomerase I, plasmid (EC 5.99.1.2) (Omega-protein)|
           (Relaxing enzyme) (Untwisting enzyme) (Swivelase)
          Length = 660

 Score = 30.8 bits (68), Expect = 0.89
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 160 LDCSSISKHPVREAGQPAEEVDGRGGH 240
           L  S+  KHP +E G+P   + G+ GH
Sbjct: 553 LQVSATPKHPCQECGKPLRRIPGKNGH 579

>DTX3_MOUSE (Q80V91) Protein deltex-3 (Deltex-3) (Deltex3) (mDTX3)|
          Length = 347

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = -3

Query: 295 GGGGQRVLLPPPSHVPGPHARRGRQLLPPAAQPL 194
           GGGG+     P  H PGP   R   LLPP A+ L
Sbjct: 109 GGGGEH----PELHRPGPPPLRAAPLLPPGARGL 138

>SELPA_BRARE (Q98SV1) Selenoprotein Pa precursor (zSelPa)|
          Length = 367

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 12/85 (14%)
 Frame = +1

Query: 106 YIPIAHSYVH------YCGNDKIKLDCSSISKHPVREAGQPAEEV------DGRGGHGVP 249
           Y  ++H +V       YC  D+I  +CS  S   + E  +  EEV      + R  HG  
Sbjct: 150 YTILSHPHVEEAIKHTYC--DRICGECSLESSAQLEECKKATEEVNKPVEEEPRQDHGHH 207

Query: 250 EHGMAEVVEPAGHRHHLGRHRIQRH 324
           EHG  E  +    RH  G H    H
Sbjct: 208 EHGHHE-HQGEAERHRHGHHHPHHH 231

>DICER_ARATH (Q9SP32) Endoribonuclease Dicer homolog (EC 3.1.26.-) (CARPEL FACTORY|
            protein) (SHORT INTEGUMENTS 1 protein) (SUSPENSOR1
            protein)
          Length = 1909

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -2

Query: 125  ECAIGIYYVKGGEICRNNTMMMI 57
            E  IG+YYV+GG+I  N+ M  I
Sbjct: 1507 EALIGVYYVEGGKIAANHLMKWI 1529

>CO4A2_CAEEL (P17140) Collagen alpha-2(IV) chain precursor (Lethal protein 2)|
          Length = 1758

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 18/49 (36%), Positives = 21/49 (42%)
 Frame = -3

Query: 325 RGAVCDAAQDGGGGQRVLLPPPSHVPGPHARRGRQLLPPAAQPLGQDAL 179
           RG  C A   G  G++ L P  S  PGP   RG   +P      G D L
Sbjct: 530 RGGTCSACAPGTKGEKGL-PGYSGQPGPQGDRGLPGMPGPVGDAGDDGL 577

>M3K1_HUMAN (Q13233) Mitogen-activated protein kinase kinase kinase 1 (EC|
           2.7.11.25) (MAPK/ERK kinase kinase 1) (MEK kinase 1)
           (MEKK 1) (Fragment)
          Length = 1495

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 17/38 (44%), Positives = 19/38 (50%)
 Frame = -3

Query: 310 DAAQDGGGGQRVLLPPPSHVPGPHARRGRQLLPPAAQP 197
           DAA  G G Q V +PPP    G  +RRG  L    A P
Sbjct: 78  DAAGSGTGFQPVAVPPPH---GAASRRGAHLTESVAAP 112

>LMBL3_MOUSE (Q8BLB7) Lethal(3)malignant brain tumor-like 3 protein|
           (L(3)mbt-like 3 protein)
          Length = 883

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 14/24 (58%), Positives = 15/24 (62%)
 Frame = -2

Query: 212 AGCPASRTGCFEIDEQSNFILSLP 141
           AG PASR   +  DE S FI SLP
Sbjct: 801 AGIPASRVSKWSTDEVSEFIQSLP 824

>GP156_MOUSE (Q6PCP7) Probable G-protein coupled receptor 156 (GABAB-related|
           G-protein coupled receptor)
          Length = 798

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -2

Query: 233 PRPSTSSAGCPASRTGCFEIDEQSN 159
           PRP  S  GCP+  +GC+ +D +S+
Sbjct: 710 PRPRLSP-GCPSLSSGCYNLDSESS 733

>MCHR1_PANTR (Q5IJ49) Melanin-concentrating hormone receptor 1 (MCH receptor 1)|
           (MCHR-1) (MCH-R1) (MCH1R) (MCH-1R) (MCHR) (G-protein
           coupled receptor 24)
          Length = 422

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 7/58 (12%)
 Frame = -3

Query: 313 CDAAQDGGGGQRVLLPPPSHVPGPHARRGRQL-------LPPAAQPLGQDALRLTSSP 161
           C A   G GG+R  LP P+ V G  AR   Q        L  +  P G +A   +  P
Sbjct: 33  CGACAPGQGGRRWRLPQPAWVEGSSARLWEQATGTGWMDLEASLLPTGPNASNTSDGP 90

>MCHR1_HUMAN (Q99705) Melanin-concentrating hormone receptor 1 (MCH receptor 1)|
           (MCHR-1) (MCH-R1) (MCH1R) (MCH-1R) (MCHR) (G-protein
           coupled receptor 24) (Somatostatin receptor-like
           protein) (SLC-1)
          Length = 422

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 7/58 (12%)
 Frame = -3

Query: 313 CDAAQDGGGGQRVLLPPPSHVPGPHARRGRQL-------LPPAAQPLGQDALRLTSSP 161
           C A   G GG+R  LP P+ V G  AR   Q        L  +  P G +A   +  P
Sbjct: 33  CGACAPGQGGRRWRLPQPAWVEGSSARLWEQATGTGWMDLEASLLPTGPNASNTSDGP 90

>Y2544_CORGL (Q8NMM7) UPF0317 protein Cgl2544/cg2803|
          Length = 264

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = +1

Query: 124 SYVHYCGNDKIK--LDCSSISKHPVREAGQPAEEVDGRGGHGVPEHGMAEVVEPAG 285
           S V Y  +D +   + CS   +HP+ +AG P   ++   G  VP +  +    PAG
Sbjct: 103 SAVDYWRDDLVSFIIGCSFTFEHPMVQAGVPVRHLE--AGRNVPMYETSLACRPAG 156

>SOK2_YEAST (P53438) Protein SOK2|
          Length = 785

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -2

Query: 269 TSAIPCSGTPCPPRPSTSSAGCPASRTG 186
           TS+IP S +P PPR  T+    P S+ G
Sbjct: 289 TSSIPNSHSPIPPRSLTTPTQGPTSQNG 316

>Y966_TREPA (O83932) Hypothetical protein TP0966 precursor|
          Length = 544

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -2

Query: 278 GSTTSAIPCSGTPCPPRPSTSSAGCPA 198
           G+   A+P  GTP PP  + S A  PA
Sbjct: 33  GAQEQAVPAPGTPAPPAHTASEAVPPA 59

>COCA1_CHICK (P13944) Collagen alpha-1(XII) chain precursor (Fibrochimerin)|
          Length = 3124

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +1

Query: 145  NDKIKLDCSSISKHPVREAG 204
            N KI +DCS I + P++EAG
Sbjct: 2663 NVKIYIDCSEILEKPIKEAG 2682

>MTLD_BACHD (Q9K681) Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)|
          Length = 374

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -3

Query: 229 GRQLLPPAAQPLGQDALRLTSSPILFCRCRN 137
           G  +LP  A P+GQ  L+   +PI    C N
Sbjct: 90  GPSVLPHLAHPIGQGLLQRNGAPIQVIACEN 120

>COL39_CAEEL (Q09455) Cuticle collagen 39 precursor|
          Length = 323

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = -3

Query: 322 GAVCDAAQDGGGGQRVL-LPPPSHVPGPHARRGRQLLPPAAQPLGQ 188
           GA  +  Q G GGQR   LP PS  PGP    G    P  +   GQ
Sbjct: 186 GAPGNPGQAGRGGQRSHGLPGPSGAPGPQGPSGAPGQPGQSGGQGQ 231

>HME2_CHICK (Q05917) Homeobox protein engrailed-2 (Gg-En-2)|
          Length = 288

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3

Query: 292 GGGQRVLLPPPSHVPGPH 239
           GGG+R LL PP   P PH
Sbjct: 25  GGGRRALLLPPGDPPHPH 42

>PHC3_MOUSE (Q8CHP6) Polyhomeotic-like protein 3|
          Length = 981

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
 Frame = +1

Query: 67  IVLFLQISPPLT*YIPIAHSYVHYCGNDKIKL--DCSSISKHPVREAGQPAEEVDGRGGH 240
           + + LQ+ PP     P+ +     C  +  +   +C+ + + P      PA    GRG  
Sbjct: 566 VAVNLQVQPPAPVDPPVVYQVEDVCEEEMPEESDECARMDRTPPPPTLSPAAVTVGRGED 625

Query: 241 GVPEHGMAEVVE 276
              EH + E VE
Sbjct: 626 LTSEHPLLEQVE 637

>ENV_CAEVG (P31627) Env polyprotein precursor (Coat polyprotein) [Contains:|
           Leader peptide; Surface protein; Transmembrane protein]
          Length = 942

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 141 AIMNVRVCDRNILCQGR 91
           A MN+R CD N+ CQ R
Sbjct: 260 AFMNIRACDSNLRCQKR 276

>DTX3_HUMAN (Q8N9I9) Protein deltex-3 (Deltex-3) (Deltex3)|
          Length = 347

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = -3

Query: 295 GGGGQRVLLPPPSHVPGPHARRGRQLLPPAAQPL 194
           GGGG+     P  H  GP   R   LLPP A+ L
Sbjct: 109 GGGGEH----PEMHRAGPPPLRAAPLLPPGARGL 138

>ASCC1_HUMAN (Q8N9N2) Activating signal cointegrator 1 complex subunit 1 (ASC-1|
           complex subunit p50) (Trip4 complex subunit p50)
          Length = 400

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
 Frame = +1

Query: 139 CGNDKIKLDCSSI----SKHPVREAGQPAE--EVDGRGGHGVPEHGM-AEVVEPAGHRH 294
           CG  KI LDC +I    S+H V + G   +  E++ +    +P+ G   E+V    HR+
Sbjct: 81  CGFQKITLDCQNIYTWKSRHIVGKRGDTRKKIEMETKTSISIPKPGQDGEIVITGQHRN 139

>LAGE3_HUMAN (Q14657) L antigen family member 3 (ITBA2 protein) (ESO-3 protein)|
          Length = 143

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
 Frame = -3

Query: 325 RGAVCDAAQDGGGGQRVLLPPPSHVPGP-----HARRGRQLLP 212
           RG V  AA   GG       PP+H PGP      A RG ++ P
Sbjct: 24  RGGVDTAAAPAGGA------PPAHAPGPGRDAASAARGSRMRP 60

>CXX1_HUMAN (O15255) CAAX box protein 1 (Cerebral protein 5)|
          Length = 209

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 18/53 (33%), Positives = 18/53 (33%)
 Frame = -3

Query: 292 GGGQRVLLPPPSHVPGPHARRGRQLLPPAAQPLGQDALRLTSSPILFCRCRNN 134
           G G     PPP   P P  R    L PP         LR  S P   C C  N
Sbjct: 21  GEGPLCYWPPPGSPPAPSLRASLPLEPPRC------PLRSCSLPRSACLCSRN 67

>AKR1_CRYNE (Q5KP49) Palmitoyltransferase AKR1 (EC 2.3.1.-) (Ankyrin|
           repeat-containing protein AKR1)
          Length = 776

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 304 AQDGGGGQRVLLPPPSHVPGPHARRG 227
           A+ G  G  +L PP  HV GP  R G
Sbjct: 639 AEAGPEGNALLPPPGGHVHGPQCRHG 664

>ALX4_MOUSE (O35137) Homeobox protein aristaless-like 4 (ALX-4)|
          Length = 399

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -3

Query: 301 QDGGGGQRVLLPPPSHVPGPHARRGRQLLPPAAQPLGQD 185
           Q+G GG    L  P +     +  G   LPP ++P+G D
Sbjct: 128 QEGSGGHNAALQVPCYAK--ESNLGEPELPPDSEPVGMD 164

>LMBL3_HUMAN (Q96JM7) Lethal(3)malignant brain tumor-like 3 protein|
           (L(3)mbt-like 3 protein) (H-l(3)mbt-like protein)
          Length = 780

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -2

Query: 212 AGCPASRTGCFEIDEQSNFILSLP 141
           AG PAS+   +  DE S FI SLP
Sbjct: 698 AGIPASKVSKWSTDEVSEFIQSLP 721

>TTC15_HUMAN (Q8WVT3) Tetratricopeptide repeat protein 15 (TPR repeat protein|
           15)
          Length = 735

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 6/47 (12%)
 Frame = -3

Query: 319 AVCDAAQDGGGGQRVLLPPPSHVPG------PHARRGRQLLPPAAQP 197
           A    +  G G      PPP  VPG      P A RG Q   P A P
Sbjct: 231 AFISVSNPGAGSPAPASPPPLAVPGTEGRPEPVAMRGPQAAAPPASP 277

>TACC1_MOUSE (Q6Y685) Transforming acidic coiled-coil-containing protein 1|
          Length = 774

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -2

Query: 251 SGTPCPPRPSTSSAG-CPASRTGCFEI 174
           SG PC P P+ +S+G CPA+     EI
Sbjct: 422 SGDPCKPTPALTSSGFCPATGNHVNEI 448

>NMDE4_MOUSE (Q03391) Glutamate [NMDA] receptor subunit epsilon 4 precursor|
            (N-methyl D-aspartate receptor subtype 2D) (NR2D)
            (NMDAR2D)
          Length = 1323

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +3

Query: 285  PPPPSWAASHTAPR 326
            PPPP WAA   APR
Sbjct: 1197 PPPPPWAAGPPAPR 1210

>CO4A5_HUMAN (P29400) Collagen alpha-5(IV) chain precursor|
          Length = 1685

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 268 PPPSHVPGPHARRGRQLLPPAAQPLG 191
           PP   VPGP   RG   +P A  P+G
Sbjct: 850 PPGLDVPGPPGERGSPGIPGAPGPIG 875

>GCSH_HUMAN (P23434) Glycine cleavage system H protein, mitochondrial precursor|
          Length = 173

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -2

Query: 272 TTSAIPCSGTPCPPRPSTSSAGCPAS-RTG 186
           T  A+P    PCPPRP     G   + RTG
Sbjct: 15  TLRAVPLPAAPCPPRPWQLGVGAVRTLRTG 44


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,196,583
Number of Sequences: 219361
Number of extensions: 1104494
Number of successful extensions: 4839
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 4368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4816
length of database: 80,573,946
effective HSP length: 84
effective length of database: 62,147,622
effective search space used: 1491542928
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)