>emb|CT025842.2| Medicago truncatula chromosome 5 clone mth2-54i22, COMPLETE SEQUENCE
          Length = 111922

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 84    agtttcaaaagcaatctcaaac 105
             ||||||||||||||||||||||
Sbjct: 18698 agtttcaaaagcaatctcaaac 18677

>emb|CR759869.14| Zebrafish DNA sequence from clone DKEY-238F11 in linkage group 13,
             complete sequence
          Length = 284763

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 95    caatctcaaaccacaaaaacaaacc 119
             ||||| |||||||||||||||||||
Sbjct: 77154 caatcacaaaccacaaaaacaaacc 77130

>emb|BX936372.3| Mouse DNA sequence from clone RP23-94O16 on chromosome 4 Contains the
            5' end of a novel transcript, complete sequence
          Length = 79017

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 101  caaaccacaaaaacaaaccct 121
            |||||||||||||||||||||
Sbjct: 3640 caaaccacaaaaacaaaccct 3620

>gb|DP000006.1| Oryctolagus cuniculus target 1 genomic scaffold
          Length = 1889755

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 91      aaagcaatctcaaaccacaaaaacaaacc 119
               |||||||||| |||| |||||||||||||
Sbjct: 1199019 aaagcaatcttaaacaacaaaaacaaacc 1198991

>gb|AC151391.3| Oryctolagus cuniculus clone LB1-231P8, complete sequence
          Length = 53522

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 91   aaagcaatctcaaaccacaaaaacaaacc 119
            |||||||||| |||| |||||||||||||
Sbjct: 3903 aaagcaatcttaaacaacaaaaacaaacc 3875

>gb|AC108057.3| Homo sapiens BAC clone RP11-374N13 from 2, complete sequence
          Length = 127242

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 177    acatgtctgtctgtctaacaa 197
              |||||||||||||||||||||
Sbjct: 117803 acatgtctgtctgtctaacaa 117783

>emb|BX537134.5| Zebrafish DNA sequence from clone CH211-205J6, complete sequence
          Length = 192029

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 95    caatctcaaaccacaaaaacaaacc 119
             ||||| |||||||||||||||||||
Sbjct: 19331 caatcacaaaccacaaaaacaaacc 19355

>gb|AC125688.6| Rattus norvegicus 20 BAC CH230-186I2 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 209618

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   tcaaacatgtctgtctgtct 192
             ||||||||||||||||||||
Sbjct: 66923 tcaaacatgtctgtctgtct 66904

>gb|AC116856.8| Mus musculus chromosome 14, clone RP24-403P16, complete sequence
          Length = 196560

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 163   tattttatcatcaaacatgtctgtctgt 190
             |||||| ||||||||| |||||||||||
Sbjct: 39934 tattttctcatcaaacttgtctgtctgt 39907

>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0057E15, complete sequence
          Length = 149035

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 165   ttttatcatcaaacatgtctgtctgtct 192
             |||||||||  |||||||||||||||||
Sbjct: 38337 ttttatcattcaacatgtctgtctgtct 38310

>gb|AC134572.4| Mus musculus BAC clone RP23-435M15 from chromosome 3, complete sequence
          Length = 202037

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    ctcaaaccacaaaaacaaac 118
             ||||||||||||||||||||
Sbjct: 23465 ctcaaaccacaaaaacaaac 23446

>gb|AC114011.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078f20,
              complete sequence
          Length = 151042

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 165    ttttatcatcaaacatgtctgtctgtct 192
              |||||||||  |||||||||||||||||
Sbjct: 138162 ttttatcattcaacatgtctgtctgtct 138135

>emb|AL031055.1|HS28H20 Human DNA sequence from clone RP1-28H20 on chromosome 20q13.1, complete
             sequence
          Length = 127418

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 97    atctcaaaccacaaaaacaaaccc 120
             |||||||| |||||||||||||||
Sbjct: 87402 atctcaaaacacaaaaacaaaccc 87425

>gb|AC122191.4| Mus musculus BAC clone RP23-42J4 from 6, complete sequence
          Length = 250147

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 135    atatgtaaaacataacagca 154
              ||||||||||||||||||||
Sbjct: 123445 atatgtaaaacataacagca 123426

>emb|AL356452.12| Human DNA sequence from clone RP11-562L19 on chromosome 13, complete
             sequence
          Length = 81586

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    ctcaaaccacaaaaacaaac 118
             ||||||||||||||||||||
Sbjct: 26963 ctcaaaccacaaaaacaaac 26982

>emb|CR376765.12| Zebrafish DNA sequence from clone DKEY-208L2 in linkage group 13,
             complete sequence
          Length = 134448

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 37    tctcaatcagaggacaatacaagg 60
             |||||||||||| |||||||||||
Sbjct: 24466 tctcaatcagagcacaatacaagg 24489

>emb|BX649403.4| Zebrafish DNA sequence from clone CH211-153M11 in linkage group 13,
              complete sequence
          Length = 170097

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 88     tcaaaagcaatctcaaacca 107
              ||||||||||||||||||||
Sbjct: 132286 tcaaaagcaatctcaaacca 132267

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 165      ttttatcatcaaacatgtctgtctgtct 192
                |||||||||  |||||||||||||||||
Sbjct: 16397727 ttttatcattcaacatgtctgtctgtct 16397700

>gb|AC090673.5| Homo sapiens 12 BAC RP11-366L20 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 178755

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    tttcaaaagcaatctcaaac 105
             ||||||||||||||||||||
Sbjct: 83086 tttcaaaagcaatctcaaac 83105

>emb|CR925810.4| Zebrafish DNA sequence from clone DKEY-250M6 in linkage group 10,
              complete sequence
          Length = 197451

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    aaaccacaaaaacaaaccct 121
              ||||||||||||||||||||
Sbjct: 114847 aaaccacaaaaacaaaccct 114828

>emb|CT009602.4| PTB-121B21, complete sequence
          Length = 236109

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    ctagccactagtcaaatatg 139
              ||||||||||||||||||||
Sbjct: 235222 ctagccactagtcaaatatg 235203

>gb|AC102370.13| Mus musculus chromosome 3, clone RP23-256D7, complete sequence
          Length = 191171

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 99     ctcaaaccacaaaaacaaac 118
              ||||||||||||||||||||
Sbjct: 156098 ctcaaaccacaaaaacaaac 156079

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 165      ttttatcatcaaacatgtctgtctgtct 192
                |||||||||  |||||||||||||||||
Sbjct: 16488742 ttttatcattcaacatgtctgtctgtct 16488715

>gb|AC134918.5| Mus musculus BAC clone RP23-71G16 from 3, complete sequence
          Length = 191764

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 101    caaaccacaaaaacaaaccctagc 124
              ||||||||||||||||| ||||||
Sbjct: 183460 caaaccacaaaaacaaagcctagc 183483

>gb|AC173341.1| Mus musculus BAC clone RP24-332P6 from chromosome 9, complete sequence
          Length = 149387

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 98    tctcaaaccacaaaaacaaaccct 121
             |||||||| |||||||||||||||
Sbjct: 47150 tctcaaacaacaaaaacaaaccct 47127

>gb|AC138720.5| Mus musculus BAC clone RP23-192O12 from chromosome 3, complete sequence
          Length = 191825

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 101    caaaccacaaaaacaaaccctagc 124
              ||||||||||||||||| ||||||
Sbjct: 158125 caaaccacaaaaacaaagcctagc 158102

>emb|AL391155.3|CNS06C81 Human chromosome 14 DNA sequence BAC R-559M6 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 160550

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 221   ctacgagtcaggtgccctgaatgg 244
             ||||||||||||||||||| ||||
Sbjct: 45921 ctacgagtcaggtgccctggatgg 45898

>gb|AF326972.1| Homo sapiens high-mobility group protein isoform C (HMGIC) gene, intron
             3 and partial cds
          Length = 112930

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    tttcaaaagcaatctcaaac 105
             ||||||||||||||||||||
Sbjct: 97323 tttcaaaagcaatctcaaac 97342


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,567,595
Number of Sequences: 3902068
Number of extensions: 3567595
Number of successful extensions: 85627
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85519
Number of HSP's gapped (non-prelim): 108
length of query: 297
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 275
effective length of database: 17,147,199,772
effective search space: 4715479937300
effective search space used: 4715479937300
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)