Clone Name | rbastl12g05 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | STE3_YEAST (P06783) Pheromone a factor receptor | 30 | 1.2 | 2 | SCKP2_TITSE (P0C175) Peptide TsPep2 precursor | 28 | 4.7 |
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>STE3_YEAST (P06783) Pheromone a factor receptor| Length = 470 Score = 30.4 bits (67), Expect = 1.2 Identities = 11/27 (40%), Positives = 19/27 (70%) Frame = +1 Query: 46 KIFNYCLSRFSSALNLLTAAWRTTVLF 126 ++F Y ++R++ NLL+ W TTVL+ Sbjct: 135 QVFRYGIARYNGCQNLLSPTWITTVLY 161
>SCKP2_TITSE (P0C175) Peptide TsPep2 precursor| Length = 68 Score = 28.5 bits (62), Expect = 4.7 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = -2 Query: 177 IVKQSSIAAFSPLQSVVKQNGCTPSCC 97 +V + IA FS +++ VK GC CC Sbjct: 12 LVLSAMIATFSEVEATVKCGGCNRKCC 38 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,075,192 Number of Sequences: 219361 Number of extensions: 541238 Number of successful extensions: 922 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 868 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 922 length of database: 80,573,946 effective HSP length: 63 effective length of database: 66,754,203 effective search space used: 1602100872 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)