ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl12g02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MMT1_HORVU (Q9MBC2) Methionine S-methyltransferase (EC 2.1.1.12)... 31 0.66
2MMT1_MAIZE (Q8W519) Methionine S-methyltransferase (EC 2.1.1.12)... 30 1.9
3SPRI_DROME (Q8MQW8) Protein sprint (SH2 poly-proline-containing ... 28 4.3

>MMT1_HORVU (Q9MBC2) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met|
           S-methyltransferase) (Hv-MMT1)
          Length = 1088

 Score = 31.2 bits (69), Expect = 0.66
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = -3

Query: 146 LAVFPSDDVFISQVLGLFSPGSGILDERM 60
           + VFPS  V I   L LFSPG  I+DE +
Sbjct: 455 VVVFPSRAVAIENALRLFSPGLAIVDEHL 483



to top

>MMT1_MAIZE (Q8W519) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met|
           S-methyltransferase)
          Length = 1091

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -3

Query: 146 LAVFPSDDVFISQVLGLFSPGSGILDERM 60
           + VFPS  V I   L LFSP   I+DE +
Sbjct: 457 VVVFPSRSVAIENALQLFSPALAIVDEHL 485



to top

>SPRI_DROME (Q8MQW8) Protein sprint (SH2 poly-proline-containing Ras-interactor|
           protein)
          Length = 1790

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +3

Query: 78  TTTRRKQP*HLRNKHII*RKNSQQMRRRRLHSHFFST 188
           TTT R+Q  H  N H     N QQM+ R+LH+H + +
Sbjct: 55  TTTNRQQQHH--NHH-----NQQQMQSRQLHAHHWQS 84


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,819,491
Number of Sequences: 219361
Number of extensions: 818272
Number of successful extensions: 1580
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1580
length of database: 80,573,946
effective HSP length: 90
effective length of database: 60,831,456
effective search space used: 1459954944
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top