>gb|BT019236.1| Zea mays clone Contig909.F mRNA sequence
          Length = 1329

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 329 ccctgttgctttcctccataaccatgtctgg 359
           |||||||| ||||| ||||||||||||||||
Sbjct: 321 ccctgttgttttccaccataaccatgtctgg 351

>gb|AY106756.1| Zea mays PCO095940 mRNA sequence
          Length = 974

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 329 ccctgttgctttcctccataaccatgtctgg 359
           |||||||| ||||| ||||||||||||||||
Sbjct: 576 ccctgttgttttccaccataaccatgtctgg 546

>ref|XM_483606.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3172

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                        
Query: 295  tcttcttgaactgtattcagtccctgcagatctgccctgttgctttcctccataaccatg 354
            |||||| ||| ||||| ||| ||| | ||| || ||||||||||| || |||||||||||
Sbjct: 2803 tcttctggaaatgtatgcaggccccgtagaccttccctgttgcttcccaccataaccatg 2744

                 
Query: 355  tctgg 359
             ||||
Sbjct: 2743 cctgg 2739

>dbj|AK101733.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061H08, full
            insert sequence
          Length = 1855

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                        
Query: 295  tcttcttgaactgtattcagtccctgcagatctgccctgttgctttcctccataaccatg 354
            |||||| ||| ||||| ||| ||| | ||| || ||||||||||| || |||||||||||
Sbjct: 1621 tcttctggaaatgtatgcaggccccgtagaccttccctgttgcttcccaccataaccatg 1562

                 
Query: 355  tctgg 359
             ||||
Sbjct: 1561 cctgg 1557

>dbj|AK066525.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072L17, full
            insert sequence
          Length = 3173

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                        
Query: 295  tcttcttgaactgtattcagtccctgcagatctgccctgttgctttcctccataaccatg 354
            |||||| ||| ||||| ||| ||| | ||| || ||||||||||| || |||||||||||
Sbjct: 2803 tcttctggaaatgtatgcaggccccgtagaccttccctgttgcttcccaccataaccatg 2744

                 
Query: 355  tctgg 359
             ||||
Sbjct: 2743 cctgg 2739

>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence
          Length = 2205233

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 108     caaaataaggtaaagagcag 127
               ||||||||||||||||||||
Sbjct: 1716183 caaaataaggtaaagagcag 1716202

>gb|AC091527.21| Trypanosoma brucei chromosome 7 clone RPCI93-33N13, complete sequence
          Length = 114057

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 108   caaaataaggtaaagagcag 127
             ||||||||||||||||||||
Sbjct: 37240 caaaataaggtaaagagcag 37259

>gb|AC159439.1| Trypanosoma brucei chromosome 7 clone RPCI93-2F2, complete sequence
          Length = 134290

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 108    caaaataaggtaaagagcag 127
              ||||||||||||||||||||
Sbjct: 132487 caaaataaggtaaagagcag 132506

>gb|AC116812.10| Mus musculus chromosome 15, clone RP24-357G13, complete sequence
          Length = 183993

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   aggcactgttataaaagcaa 157
             ||||||||||||||||||||
Sbjct: 71254 aggcactgttataaaagcaa 71273

>gb|AC125401.4| Mus musculus BAC clone RP24-538H16 from chromosome 6, complete sequence
          Length = 130679

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 192    tcttcagccatttgaaacca 211
              ||||||||||||||||||||
Sbjct: 116208 tcttcagccatttgaaacca 116227

>gb|AE014819.1| Plasmodium falciparum 3D7 chromosome 14 section 4 of 13 of the complete
              sequence
          Length = 251448

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    gtgcacaaattttgaataat 179
              ||||||||||||||||||||
Sbjct: 227852 gtgcacaaattttgaataat 227833

>gb|AC104416.7| Homo sapiens chromosome 8, clone CTD-3015P10, complete sequence
          Length = 172029

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 209   ccaaaactcagccaacttgacatg 232
             ||||||||||| ||||||||||||
Sbjct: 34475 ccaaaactcagtcaacttgacatg 34452

>ref|XM_695069.1| PREDICTED: Danio rerio similar to cyclin fold protein 1
           (LOC571475), partial mRNA
          Length = 438

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 389 ccaactcgttcatgtcttcc 408
           ||||||||||||||||||||
Sbjct: 286 ccaactcgttcatgtcttcc 267

>gb|AC010374.6| Homo sapiens chromosome 5 clone CTD-2057J6, complete sequence
          Length = 117372

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 216   tcagccaacttgacatgatt 235
             ||||||||||||||||||||
Sbjct: 86544 tcagccaacttgacatgatt 86525

>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 201     atttgaaaccaaaactcagccaacttga 228
               |||||||||||||| |||||||| ||||
Sbjct: 1851725 atttgaaaccaaaagtcagccaatttga 1851698

>gb|AC027126.4|AC027126 Homo sapiens chromosome 3 clone RP11-586C12 map 3p, complete sequence
          Length = 185608

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   atttgaaaccaaaactcagc 220
             ||||||||||||||||||||
Sbjct: 64354 atttgaaaccaaaactcagc 64373

>gb|AC108016.5| Homo sapiens BAC clone RP13-1015A13 from 4, complete sequence
          Length = 162715

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 186   agcagatcttcagccatttgaaac 209
             ||||||||||||| ||||||||||
Sbjct: 65361 agcagatcttcaggcatttgaaac 65338

>gb|AC092608.2| Homo sapiens BAC clone RP11-154F14 from 4, complete sequence
          Length = 196952

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 165    caaattttgaataatgaatt 184
              ||||||||||||||||||||
Sbjct: 131376 caaattttgaataatgaatt 131357

>gb|AC159138.6| Mus musculus  BAC RP23-315F23 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 180124

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   tcttcagccatttgaaacca 211
             ||||||||||||||||||||
Sbjct: 63937 tcttcagccatttgaaacca 63956

>gb|AC010281.4|AC010281 Homo sapiens chromosome 5 clone CTC-553B9, complete sequence
          Length = 160378

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 396    gttcatgtcttcccccattg 415
              ||||||||||||||||||||
Sbjct: 143912 gttcatgtcttcccccattg 143893

>emb|AL929039.7| Zebrafish DNA sequence from clone DKEY-245I6, complete sequence
          Length = 162385

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 169    ttttgaataatgaattcagc 188
              ||||||||||||||||||||
Sbjct: 129191 ttttgaataatgaattcagc 129210

>gb|AC090947.2| Homo sapiens chromosome 3 clone RP11-30G23 map 3p, complete sequence
          Length = 166049

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   atttgaaaccaaaactcagc 220
             ||||||||||||||||||||
Sbjct: 20096 atttgaaaccaaaactcagc 20115

>gb|AC018500.4| Homo sapiens chromosome 3 clone RP11-275J11 map 3p, complete sequence
          Length = 150810

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   atttgaaaccaaaactcagc 220
             ||||||||||||||||||||
Sbjct: 18454 atttgaaaccaaaactcagc 18435


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,101,162
Number of Sequences: 3902068
Number of extensions: 4101162
Number of successful extensions: 77669
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77604
Number of HSP's gapped (non-prelim): 65
length of query: 434
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 412
effective length of database: 17,147,199,772
effective search space: 7064646306064
effective search space used: 7064646306064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)