Clone Name | rbastl12f09 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ARAB_STRAT (P52659) HTH-type transcriptional regulator araB | 28 | 6.5 |
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>ARAB_STRAT (P52659) HTH-type transcriptional regulator araB| Length = 301 Score = 28.1 bits (61), Expect = 6.5 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -1 Query: 143 PFDFTTSKAVPALAGTTGD 87 P +FTT + +PAL G TGD Sbjct: 97 PPEFTTERVLPALTGLTGD 115 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,094,930 Number of Sequences: 219361 Number of extensions: 570435 Number of successful extensions: 1285 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 1280 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1285 length of database: 80,573,946 effective HSP length: 47 effective length of database: 70,263,979 effective search space used: 1686335496 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)