ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl12f08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GLMS_TREPA (O83833) Glucosamine--fructose-6-phosphate aminotrans... 31 0.84
2DNAK_ANAVT (O05714) Chaperone protein dnaK (Heat shock protein 7... 29 3.2
3DNAK1_ANASP (Q9ZEJ6) Chaperone protein dnaK1 (Heat shock protein... 29 3.2
4MURE_LISMO (Q8Y5L9) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-... 29 3.2
5KR195_HUMAN (Q3LI72) Keratin-associated protein 19-5 28 4.1
6CATA_ASPFU (P78574) Catalase A (EC 1.11.1.6) (Fast catalase) 28 4.1
7CATA_EMENI (P55305) Catalase A (EC 1.11.1.6) (Spore-specific cat... 28 4.1
8PHSA_SALTY (P37600) Thiosulfate reductase precursor (EC 1.-.-.-) 28 4.1
9DNAK_CORJK (Q4JXX6) Chaperone protein dnaK (Heat shock protein 7... 28 5.4
10DNAK_PSESG (Q9WWG9) Chaperone protein dnaK (Heat shock protein 7... 28 5.4
11RW1_MOUSE (O70472) RW1 protein 28 7.1
12COMA_CONMA (Q9TWL9) Conodipine-M alpha chain (EC 3.1.1.4) 27 9.2
13DNAK_MYCCT (Q2SSB0) Chaperone protein dnaK (Heat shock protein 7... 27 9.2
14DNAK_MYCCA (P0C177) Chaperone protein dnaK (Heat shock protein 7... 27 9.2
15PER_DROPS (P12348) Period circadian protein 27 9.2
16M4A8A_MOUSE (Q99N10) Membrane-spanning 4-domains subfamily A mem... 27 9.2
17DNAK_RHILO (Q98DD1) Chaperone protein dnaK (Heat shock protein 7... 27 9.2
18LSHB_HORSE (P08751) Lutropin/choriogonadotropin beta chain precu... 27 9.2

>GLMS_TREPA (O83833) Glucosamine--fructose-6-phosphate aminotransferase|
           [isomerizing] (EC 2.6.1.16) (Hexosephosphate
           aminotransferase) (D-fructose-6-phosphate
           amidotransferase) (GFAT)
           (L-glutamine-D-fructose-6-phosphate amidotransferase)
           (Glucosamine-6-ph
          Length = 634

 Score = 30.8 bits (68), Expect = 0.84
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -3

Query: 179 CN*LQSCLVARMDRHATCTHSGGHVGVELVVSFDLKLICICI 54
           CN  +S LV   D     TH+G  +GV    SF  +L+C+ +
Sbjct: 387 CNGARSTLVRESDA-VLLTHAGSEIGVASTKSFTTQLVCLLV 427



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>DNAK_ANAVT (O05714) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 688

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3

Query: 240 EHSEGSSVTTTFTSEHAMLGNSKNLHQIKA*GVSLTPRGIP 362
           E+++ S        E  M G++K+L + K  G+   PRGIP
Sbjct: 425 ENNQNSVEIHVVQGEREMAGDNKSLGRFKLYGIPPAPRGIP 465



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>DNAK1_ANASP (Q9ZEJ6) Chaperone protein dnaK1 (Heat shock protein 70-1) (Heat|
           shock 70 kDa protein 1) (HSP70-1)
          Length = 688

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3

Query: 240 EHSEGSSVTTTFTSEHAMLGNSKNLHQIKA*GVSLTPRGIP 362
           E+++ S        E  M G++K+L + K  G+   PRGIP
Sbjct: 425 ENNQNSVEIHVVQGEREMAGDNKSLGRFKLYGIPPAPRGIP 465



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>MURE_LISMO (Q8Y5L9) UDP-N-acetylmuramoylalanyl-D-glutamate--2,|
           6-diaminopimelate ligase (EC 6.3.2.13)
           (UDP-N-acetylmuramyl-tripeptide synthetase)
           (Meso-diaminopimelate-adding enzyme)
           (UDP-MurNAc-tripeptide synthetase)
          Length = 491

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
 Frame = +3

Query: 36  NFQYTLDTYTNKLKVKRHHQFNSYMSTRVGTSGMPVHSGNQTRLQLVTA---LVDGIKMF 206
           ++ +T++ Y N   +      NSY ++    + +        R+Q  TA   +  GIK  
Sbjct: 205 DYHHTMEEYANAKSLLFAQLGNSYHTSNPKIAVLNADDAESVRMQKATAAHIITFGIKQE 264

Query: 207 LDEPPANAEV*EHSEGSSVTT---TFTSEHAMLGN 302
            D   +N ++  H     + T    FT +  M+GN
Sbjct: 265 ADFQASNIKITSHGSTFDLGTPVGNFTLKIKMIGN 299



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>KR195_HUMAN (Q3LI72) Keratin-associated protein 19-5|
          Length = 72

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +2

Query: 263 DDNLYLRACHAGELQKLASDQSLGGFPHSSGYSGFFFR 376
           DD  Y   C  G  ++L      GG+ + SG+ G+ +R
Sbjct: 19  DDLGYGYGCGCGSFRRLGYGGGYGGYGYGSGFGGYGYR 56



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>CATA_ASPFU (P78574) Catalase A (EC 1.11.1.6) (Fast catalase)|
          Length = 750

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 335 PLGFDLMQVFGVPQHGMLGGKGCRHGGSFTMLLHLGI 225
           P  + +MQ FGV    ++  +G RH   F  + HLG+
Sbjct: 228 PRSYRMMQGFGVNTFALVNKEGKRHFVKFHWIPHLGV 264



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>CATA_EMENI (P55305) Catalase A (EC 1.11.1.6) (Spore-specific catalase)|
          Length = 744

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 335 PLGFDLMQVFGVPQHGMLGGKGCRHGGSFTMLLHLGI 225
           P  + +MQ FGV    ++  +G RH   F  + HLG+
Sbjct: 228 PRSYRMMQGFGVNTFSLVNKEGKRHFVKFHWIPHLGV 264



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>PHSA_SALTY (P37600) Thiosulfate reductase precursor (EC 1.-.-.-)|
          Length = 758

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 22  SSKDVTFSTHLIHIQISLRSKDTTSSTPTCP 114
           SSK  + S+HL H+  +  S +T +   TCP
Sbjct: 145 SSKSGSLSSHLFHLATAFGSPNTFTHASTCP 175



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>DNAK_CORJK (Q4JXX6) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 620

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 18/75 (24%), Positives = 33/75 (44%)
 Frame = +3

Query: 138 PVHSGNQTRLQLVTALVDGIKMFLDEPPANAEV*EHSEGSSVTTTFTSEHAMLGNSKNLH 317
           P+  G +T+  ++T L++       +        E S+ S     F  E  M  ++K L 
Sbjct: 370 PLSLGIETKGGVMTKLIERNTTIPTKRSETFTTAEDSQPSVQIQVFQGEREMAAHNKLLG 429

Query: 318 QIKA*GVSLTPRGIP 362
             +  G++  PRG+P
Sbjct: 430 SFELAGIAPAPRGVP 444



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>DNAK_PSESG (Q9WWG9) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 638

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 17/75 (22%), Positives = 31/75 (41%)
 Frame = +3

Query: 138 PVHSGNQTRLQLVTALVDGIKMFLDEPPANAEV*EHSEGSSVTTTFTSEHAMLGNSKNLH 317
           P+  G +    ++TAL+     FL   P+     ++ E +        E    G +K+L 
Sbjct: 396 PLTLGIEAMGGVMTALIKKTPRFLPRNPSVLTADDNQENAVAIHVLQGERKQAGQNKSLG 455

Query: 318 QIKA*GVSLTPRGIP 362
           +     +   PRG+P
Sbjct: 456 KFDLAEIPPAPRGVP 470



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>RW1_MOUSE (O70472) RW1 protein|
          Length = 1829

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -3

Query: 359  NTPRSEGNPLGFDLMQVFGVPQHGMLGGKGCRH 261
            N P   G P  FDL ++ G+   G L   GC H
Sbjct: 1110 NPPFDVGRP--FDLRRIVGISSEGNLNTLGCEH 1140



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>COMA_CONMA (Q9TWL9) Conodipine-M alpha chain (EC 3.1.1.4)|
          Length = 77

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -3

Query: 167 QSCLVARMDRHATCTHSGGHVG 102
           Q   +A  DRH TC H G H G
Sbjct: 26  QKXFLAACDRHDTCYHCGKHFG 47



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>DNAK_MYCCT (Q2SSB0) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 591

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 282 EHAMLGNSKNLHQIKA*GVSLTPRGIP 362
           E AM  ++K+L Q +  G+   PRGIP
Sbjct: 416 ERAMAADNKSLGQFQLTGIQPAPRGIP 442



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>DNAK_MYCCA (P0C177) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 591

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 282 EHAMLGNSKNLHQIKA*GVSLTPRGIP 362
           E AM  ++K+L Q +  G+   PRGIP
Sbjct: 416 ERAMAADNKSLGQFQLTGIQPAPRGIP 442



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>PER_DROPS (P12348) Period circadian protein|
          Length = 1241

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +2

Query: 266 DNLYLRACHAGELQKLASDQSLGGFPHSSGYSGF 367
           D+ Y  +C   + Q+  S +S+    HSSG SG+
Sbjct: 16  DSAYSNSCSNSQSQRSGSSKSMLSGSHSSGSSGY 49



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>M4A8A_MOUSE (Q99N10) Membrane-spanning 4-domains subfamily A member 8A (CD20|
           antigen-like 5) (Fragment)
          Length = 287

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +3

Query: 99  NSYMSTRVGTSGMPVHSGNQTRLQLVTALVDGIKMFLDEPPA 224
           NSY         MP++  NQ ++ +++  + G+   + EPPA
Sbjct: 56  NSYPVVPGTVPQMPIYPSNQPQVHVISGHLPGLVPAMTEPPA 97



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>DNAK_RHILO (Q98DD1) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 638

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +3

Query: 240 EHSEGSSVTTTFTSEHAMLGNSKNLHQIKA*GVSLTPRGIP 362
           E S+ +     F  E  M  ++K L Q    G+   PRG+P
Sbjct: 425 EDSQSAVTIRVFQGEREMAADNKALGQFDLVGIPPAPRGVP 465



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>LSHB_HORSE (P08751) Lutropin/choriogonadotropin beta chain precursor|
           (LSH-B/CG-B) (Lutenizing hormone beta subunit)
          Length = 169

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 140 RHATCTHSGGHVGVELVVSFDLKLICICIKCVLKVTSLELIR 15
           R A+    G   GV+ +VSF + L C C  C +K T   + R
Sbjct: 83  RFASIRLPGCPPGVDPMVSFPVALSCHCGPCQIKTTDCGVFR 124


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,811,780
Number of Sequences: 219361
Number of extensions: 1340862
Number of successful extensions: 3700
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3700
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 1407308304
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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