>gb|AC161375.4| Mus musculus BAC clone RP23-297A22 from chromosome 14, complete
             sequence
          Length = 211662

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 281   cctgggttccttcctctgctt 301
             |||||||||||||||||||||
Sbjct: 33274 cctgggttccttcctctgctt 33254

>gb|AC024073.7| Homo sapiens chromosome 10 clone RP11-394D15, complete sequence
          Length = 172892

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 102   ctacataatagtttgcacaaa 122
             |||||||||||||||||||||
Sbjct: 32062 ctacataatagtttgcacaaa 32042

>gb|AC113389.2| Homo sapiens chromosome 5 clone RP11-35A11, complete sequence
          Length = 170706

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 181  attctttttaaaaatgataca 201
            |||||||||||||||||||||
Sbjct: 8169 attctttttaaaaatgataca 8149

>emb|BX530059.4| Zebrafish DNA sequence from clone DKEYP-111B3 in linkage group 21,
              complete sequence
          Length = 179045

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 176    tctgcattctttttaaaaatg 196
              |||||||||||||||||||||
Sbjct: 128482 tctgcattctttttaaaaatg 128502

>gb|AC027671.9| Homo sapiens chromosome 10 clone RP11-183F21, complete sequence
          Length = 152867

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 102    ctacataatagtttgcacaaa 122
              |||||||||||||||||||||
Sbjct: 132099 ctacataatagtttgcacaaa 132079

>gb|AC162927.3| Mus musculus BAC clone RP23-269E12 from chromosome 9, complete sequence
          Length = 213948

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 180   cattctttttaaaaatgatac 200
             |||||||||||||||||||||
Sbjct: 82821 cattctttttaaaaatgatac 82841

>gb|AC159320.3| Mus musculus BAC clone RP23-51A12 from chromosome 14, complete sequence
          Length = 255936

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 281   cctgggttccttcctctgctt 301
             |||||||||||||||||||||
Sbjct: 64623 cctgggttccttcctctgctt 64643

>gb|AC147892.2| Xenopus tropicalis clone CH216-35D21, complete sequence
          Length = 178580

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 144    taacagcattatcatgacatt 164
              |||||||||||||||||||||
Sbjct: 111568 taacagcattatcatgacatt 111548

>gb|AC126684.4| Mus musculus BAC clone RP23-68L2 from chromosome 14, complete sequence
          Length = 233755

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 281    cctgggttccttcctctgctt 301
              |||||||||||||||||||||
Sbjct: 153069 cctgggttccttcctctgctt 153049

>emb|AL845423.4| Mouse DNA sequence from clone RP23-207C2 on chromosome 2, complete
             sequence
          Length = 97017

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 170   aatgtctctgcattctttttaaaaa 194
             |||| ||||||||||||||||||||
Sbjct: 24881 aatggctctgcattctttttaaaaa 24905

>emb|AL669966.10| Mouse DNA sequence from clone RP23-174K9 on chromosome 4, complete
             sequence
          Length = 199890

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 291   ttcctctgcttcttgtttgct 311
             |||||||||||||||||||||
Sbjct: 86585 ttcctctgcttcttgtttgct 86565

>gb|AY102286.1| Mus musculus RTN4 (Rtn4) gene, complete cds, alternatively spliced
          Length = 60615

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 182   ttctttttaaaaatgataca 201
             ||||||||||||||||||||
Sbjct: 36021 ttctttttaaaaatgataca 36040

>gb|AC167123.2| Mus musculus chromosome 7, clone wi1-2141C15, complete sequence
          Length = 42845

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 278   gcacctgggttccttcctct 297
             ||||||||||||||||||||
Sbjct: 22700 gcacctgggttccttcctct 22681

>ref|XM_532621.2| PREDICTED: Canis familiaris similar to quattro (LOC475398), mRNA
          Length = 5341

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 286  gttccttcctctgcttcttg 305
            ||||||||||||||||||||
Sbjct: 4957 gttccttcctctgcttcttg 4976

>gb|AC116557.30| Mus musculus strain C57BL/6J clone rp23-239f10 map 8, complete sequence
          Length = 232571

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 182    ttctttttaaaaatgataca 201
              ||||||||||||||||||||
Sbjct: 101416 ttctttttaaaaatgataca 101397

>gb|AC131111.4| Mus musculus BAC clone RP23-449N4 from chromosome 7, complete sequence
          Length = 179068

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 278    gcacctgggttccttcctct 297
              ||||||||||||||||||||
Sbjct: 142345 gcacctgggttccttcctct 142364

>gb|AC123042.2| Mus musculus BAC clone RP24-545O17 from 10, complete sequence
          Length = 177899

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   tgagataatgtctctgcatt 183
             ||||||||||||||||||||
Sbjct: 75832 tgagataatgtctctgcatt 75851

>gb|AC153643.22| Medicago truncatula clone mth2-109d3, complete sequence
          Length = 114250

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 184  ctttttaaaaatgatacaca 203
            ||||||||||||||||||||
Sbjct: 4389 ctttttaaaaatgatacaca 4370

>gb|AC149079.7| Medicago truncatula clone mth2-75i8, complete sequence
          Length = 121295

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   ctttttaaaaatgatacaca 203
             ||||||||||||||||||||
Sbjct: 43761 ctttttaaaaatgatacaca 43780

>emb|AL358593.22| Human DNA sequence from clone RP11-473A10 on chromosome 1 Contains the 3'
              end of the gene for a novel protein (KIAA1626, FLJ34701,
              FLJ44929, FLJ10521) and the 5' end of a novel gene,
              complete sequence
          Length = 142454

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 281    cctgggttccttcctctgct 300
              ||||||||||||||||||||
Sbjct: 107558 cctgggttccttcctctgct 107577

>emb|CR376751.15| Zebrafish DNA sequence from clone CH211-220M6 in linkage group 8,
            complete sequence
          Length = 229078

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 169  taatgtctctgcattctttttaaaaatg 196
            |||||||||||| || ||||||||||||
Sbjct: 9837 taatgtctctgctttgtttttaaaaatg 9864

>emb|CR847797.8| Zebrafish DNA sequence from clone DKEY-281F2 in linkage group 8,
             complete sequence
          Length = 219913

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 169   taatgtctctgcattctttttaaaaatg 196
             |||||||||||| || ||||||||||||
Sbjct: 17289 taatgtctctgctttgtttttaaaaatg 17316

>emb|AL929371.6| Mouse DNA sequence from clone RP23-176O5 on chromosome 11 Contains a
              ribosomal protein S2 (Rps2) pseudogene, a novel gene, an
              apurinic/apyrimidinic endonuclease 2 (Apex2) pseudogene,
              the Rtn4 gene for reticulon 4, the 3' end of the gene for a
              novel protein (C230094A16Rik) (MGC38936) and a CpG island,
              complete sequence
          Length = 212042

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 182    ttctttttaaaaatgataca 201
              ||||||||||||||||||||
Sbjct: 124829 ttctttttaaaaatgataca 124848

>emb|BX908757.10| Zebrafish DNA sequence from clone DKEY-206L1 in linkage group 22,
            complete sequence
          Length = 143845

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 184  ctttttaaaaatgatacaca 203
            ||||||||||||||||||||
Sbjct: 2338 ctttttaaaaatgatacaca 2319

>gb|AC009435.5| Homo sapiens chromosome , clone RP11-124B13, complete sequence
          Length = 133148

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 287   ttccttcctctgcttcttgt 306
             ||||||||||||||||||||
Sbjct: 83896 ttccttcctctgcttcttgt 83877

>gb|AC144923.7| Mus musculus chromosome 7, clone RP23-366A16, complete sequence
          Length = 177745

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 278    gcacctgggttccttcctct 297
              ||||||||||||||||||||
Sbjct: 170808 gcacctgggttccttcctct 170827

>gb|AC154738.2| Mus musculus BAC clone RP24-390D14 from chromosome 14, complete sequence
          Length = 197100

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 242    ttgagtcctgatgtgtcctg 261
              ||||||||||||||||||||
Sbjct: 190404 ttgagtcctgatgtgtcctg 190385

>gb|AC011727.16| Homo sapiens chromosome 8, clone RP11-10H7, complete sequence
          Length = 152530

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 287   ttccttcctctgcttcttgt 306
             ||||||||||||||||||||
Sbjct: 10240 ttccttcctctgcttcttgt 10221

>gb|AC164099.3| Mus musculus BAC clone RP23-10H9 from chromosome 14, complete sequence
          Length = 221612

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 242    ttgagtcctgatgtgtcctg 261
              ||||||||||||||||||||
Sbjct: 187904 ttgagtcctgatgtgtcctg 187923

>gb|AC147232.4| Mus musculus BAC clone RP23-311C15 from 7, complete sequence
          Length = 191521

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 278   gcacctgggttccttcctct 297
             ||||||||||||||||||||
Sbjct: 10372 gcacctgggttccttcctct 10391

>gb|AC141564.4| Mus musculus BAC clone RP23-361B14 from 10, complete sequence
          Length = 210784

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    tgagataatgtctctgcatt 183
              ||||||||||||||||||||
Sbjct: 208986 tgagataatgtctctgcatt 209005

>emb|AL808111.4| Mouse DNA sequence from clone RP23-355J9 on chromosome X, complete
             sequence
          Length = 199724

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 176   tctgcattctttttaaaaat 195
             ||||||||||||||||||||
Sbjct: 45886 tctgcattctttttaaaaat 45867


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,739,404
Number of Sequences: 3902068
Number of extensions: 3739404
Number of successful extensions: 78384
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78321
Number of HSP's gapped (non-prelim): 63
length of query: 337
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 315
effective length of database: 17,147,199,772
effective search space: 5401367928180
effective search space used: 5401367928180
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)