>MED12_HUMAN (Q93074) Mediator of RNA polymerase II transcription subunit 12|
           (Thyroid hormone receptor-associated protein complex 230
           kDa component) (Trap230) (Activator-recruited cofactor
           240 kDa component) (ARC240) (CAG repeat protein 45)
           (OPA-containin
          Length = 2212

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 16/29 (55%), Positives = 19/29 (65%)
 Frame = +2

Query: 44  QSFCILPTTSLPVPCRANTNSTPFSFLLV 130
           QS   LPTT  P P  ++T STPFS LL+
Sbjct: 358 QSTSTLPTTPAPQPPTSSTPSTPFSDLLM 386

>KUP_AZOSE (Q5P3E3) Probable potassium transport system protein kup|
          Length = 640

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = -1

Query: 102 FVLARHGTGS--EVVGSIQKDWFFLVLVL 22
           FV+ RHGTGS   + G +   WF L+ VL
Sbjct: 173 FVIQRHGTGSVGRIFGPVMLVWFVLLAVL 201


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,956,302
Number of Sequences: 219361
Number of extensions: 1192433
Number of successful extensions: 3486
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3482
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)