ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl12f03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, ... 289 3e-75
2gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full ... 129 6e-27
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 80 5e-12
4emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 80 5e-12
5gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genom... 80 5e-12
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 80 5e-12
7dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 5e-12
8ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA 74 3e-10
9gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds 64 3e-07
10gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRN... 62 1e-06
11gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full... 62 1e-06
12gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, co... 62 1e-06
13ref|XM_469412.1| Oryza sativa (japonica cultivar-group), mRNA 60 5e-06
14ref|XM_469411.1| Oryza sativa (japonica cultivar-group), mRNA 60 5e-06
15gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosom... 60 5e-06
16gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual posit... 60 5e-06
17dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 5e-06
18dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 5e-06
19dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 5e-06
20dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 5e-06
21gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-... 58 2e-05
22gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partia... 48 0.018
23gb|AY720897.2| Triticum aestivum lipoxygenase gene, partial sequ... 46 0.072
24ref|XM_483279.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.072
25gb|AC137004.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.072
26dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.072
27dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.072
28dbj|AP005816.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.072
29dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.072
30dbj|AK066825.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.072
31gb|AF095896.1|AF095896 Oryza sativa lipoxygenase (CM-LOX2) mRNA,... 46 0.072
32gb|AF095895.1|AF095895 Oryza sativa lipoxygenase (CM-LOX1) mRNA,... 46 0.072
33dbj|D14000.1|RICL2OP Oryza sativa (japonica cultivar-group) lox2... 46 0.072
34ref|XM_464447.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.29
35dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.29
36dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.29
37dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.29
38dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.29
39gb|AY111869.1| Zea mays CL452_-8 mRNA sequence 44 0.29
40gb|AY103567.1| Zea mays PCO116252 mRNA sequence 44 0.29
41emb|Z82288.2|CEZK896 Caenorhabditis elegans Cosmid ZK896, comple... 42 1.1
42gb|DQ428248.1| Sorghum propinquum locus PRC0271 genomic sequence 42 1.1
43gb|DQ428247.1| Sorghum bicolor voucher PI585454 locus PRC0271 ge... 42 1.1
44gb|DQ428246.1| Sorghum bicolor voucher PI267539 locus PRC0271 ge... 42 1.1
45gb|DQ428245.1| Sorghum bicolor voucher PI267408 locus PRC0271 ge... 42 1.1
46gb|DQ428244.1| Sorghum bicolor voucher PI221607 locus PRC0271 ge... 42 1.1
47gb|DQ428243.1| Sorghum bicolor voucher PI152702 locus PRC0271 ge... 42 1.1
48gb|DQ428242.1| Sorghum bicolor voucher NSL92371 locus PRC0271 ge... 42 1.1
49gb|DQ428241.1| Sorghum bicolor voucher NSL87902 locus PRC0271 ge... 42 1.1
50gb|DQ428240.1| Sorghum bicolor voucher NSL87666 locus PRC0271 ge... 42 1.1
51gb|DQ428239.1| Sorghum bicolor voucher NSL77217 locus PRC0271 ge... 42 1.1
52gb|DQ428238.1| Sorghum bicolor voucher NSL77034 locus PRC0271 ge... 42 1.1
53gb|DQ428237.1| Sorghum bicolor voucher NSL55243 locus PRC0271 ge... 42 1.1
54gb|DQ428236.1| Sorghum bicolor voucher NSL51365 locus PRC0271 ge... 42 1.1
55gb|DQ428235.1| Sorghum bicolor voucher NSL51030 locus PRC0271 ge... 42 1.1
56gb|DQ428234.1| Sorghum bicolor voucher BTx623 locus PRC0271 geno... 42 1.1
57emb|BX294385.17| Zebrafish DNA sequence from clone CH211-197E8 i... 42 1.1
58gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complet... 42 1.1
59gb|AY110522.1| Zea mays CL4677_2 mRNA sequence 40 4.5
60gb|AY104322.1| Zea mays PCO093659 mRNA sequence 40 4.5 
>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds
          Length = 2910

 Score =  289 bits (146), Expect = 3e-75
 Identities = 152/154 (98%)
 Strand = Plus / Minus

                                                                        
Query: 184  agctagctccggtgtaagcaagcaaggatagcacaaaagcatgaggtctcgacgacggac 243
            ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 2727 agctagctccggtgtaagcaagcaaggatagcacaaaggcatgaggtctccacgacggac 2668

                                                                        
Query: 244  gtgctcagatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctg 303
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2667 gtgctcagatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctg 2608

                                              
Query: 304  tcccgtgtggtcggaggtgtttgggtagagcagc 337
            ||||||||||||||||||||||||||||||||||
Sbjct: 2607 tcccgtgtggtcggaggtgtttgggtagagcagc 2574



 Score =  270 bits (136), Expect = 3e-69
 Identities = 149/153 (97%), Gaps = 4/153 (2%)
 Strand = Plus / Minus

                                                                        
Query: 19   ttcattattgggcaaaacaagggattttttctgcacacgacgatgcattgaccggtagcc 78
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2896 ttcattattgggcaaaacaagggattttttctgcacacgacgatgcattgaccggtagcc 2837

                                                                        
Query: 79   agctgagctgagcttccgcatgccgatcagacccgtcgtgcacgcaccc----ttattgc 134
            |||||||||||||||||||||||||||||||||||||||||||||||||    |||||||
Sbjct: 2836 agctgagctgagcttccgcatgccgatcagacccgtcgtgcacgcacccttatttattgc 2777

                                             
Query: 135  cttaattattcatgcaccggcacaactctctgt 167
            |||||||||||||||||||||||||||||||||
Sbjct: 2776 cttaattattcatgcaccggcacaactctctgt 2744
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>gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full insert mRNA
           sequence
          Length = 1129

 Score =  129 bits (65), Expect = 6e-27
 Identities = 80/85 (94%)
 Strand = Plus / Minus

                                                                       
Query: 253 tcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtg 312
           ||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 906 tcagatggagatgctgttggggatgcccctggccgtgagcccctcggcctggcccgtgtg 847

                                    
Query: 313 gtcggaggtgtttgggtagagcagc 337
           |||||||||||| ||||||||||||
Sbjct: 846 gtcggaggtgttggggtagagcagc 822



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                              
Query: 12   catcgacttcattattgggcaaaacaagggattttttctgcacacgacga 61
            ||||||||| |||||||||||||  |||||| |||||||| |||||||||
Sbjct: 1099 catcgactttattattgggcaaatgaagggaatttttctgtacacgacga 1050



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 42/46 (91%), Gaps = 1/46 (2%)
 Strand = Plus / Minus

                                                          
Query: 94   ccgcatgccgatcagacccgtcgtgcacgcac-ccttattgcctta 138
            ||||||||||||| |||||||||||||| ||| | |||||||||||
Sbjct: 1045 ccgcatgccgatcggacccgtcgtgcacacacgcattattgcctta 1000
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                            
Query: 250      agatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgt 309
                |||||||||||| |||||||| |||||||||||||||| ||| ||  | || |  ||| |
Sbjct: 30026452 agatcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgccctt 30026393

                                            
Query: 310      gtggtcggaggtgtttgggtagagcagc 337
                | ||||||||||||||||||||||||||
Sbjct: 30026392 gaggtcggaggtgtttgggtagagcagc 30026365



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                          
Query: 253      tcagatggatatgctgttcgggatgcccctggcggtgagccc 294
                ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 27821686 tcagatggagatgctgttggggatgcccatggcggtgagccc 27821645
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>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2
          Length = 2830

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                        
Query: 250  agatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgt 309
            |||||||||||| |||||||| |||||||||||||||| ||| ||  | || |  ||| |
Sbjct: 2698 agatcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgccctt 2639

                                        
Query: 310  gtggtcggaggtgtttgggtagagcagc 337
            | ||||||||||||||||||||||||||
Sbjct: 2638 gaggtcggaggtgtttgggtagagcagc 2611
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>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete
             sequence
          Length = 155106

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 76/88 (86%)
 Strand = Plus / Plus

                                                                         
Query: 250   agatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgt 309
             |||||||||||| |||||||| |||||||||||||||| ||| ||  | || |  ||| |
Sbjct: 81299 agatcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgccctt 81358

                                         
Query: 310   gtggtcggaggtgtttgggtagagcagc 337
             | ||||||||||||||||||||||||||
Sbjct: 81359 gaggtcggaggtgtttgggtagagcagc 81386
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                            
Query: 250      agatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgt 309
                |||||||||||| |||||||| |||||||||||||||| ||| ||  | || |  ||| |
Sbjct: 30117874 agatcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgccctt 30117815

                                            
Query: 310      gtggtcggaggtgtttgggtagagcagc 337
                | ||||||||||||||||||||||||||
Sbjct: 30117814 gaggtcggaggtgtttgggtagagcagc 30117787



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                          
Query: 253      tcagatggatatgctgttcgggatgcccctggcggtgagccc 294
                ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 27913010 tcagatggagatgctgttggggatgcccatggcggtgagccc 27912969
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>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full
            insert sequence
          Length = 2928

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                        
Query: 250  agatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgt 309
            |||||||||||| |||||||| |||||||||||||||| ||| ||  | || |  ||| |
Sbjct: 2731 agatcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgccctt 2672

                                        
Query: 310  gtggtcggaggtgtttgggtagagcagc 337
            | ||||||||||||||||||||||||||
Sbjct: 2671 gaggtcggaggtgtttgggtagagcagc 2644
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>ref|XM_469655.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2613

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 73/85 (85%)
 Strand = Plus / Minus

                                                                        
Query: 253  tcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtg 312
            ||||||||| |||||||| |||||||||||||||| ||| ||  | || |  ||| || |
Sbjct: 2613 tcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgag 2554

                                     
Query: 313  gtcggaggtgtttgggtagagcagc 337
            |||||||||||||||||||||||||
Sbjct: 2553 gtcggaggtgtttgggtagagcagc 2529
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>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds
          Length = 2818

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 74/88 (84%)
 Strand = Plus / Minus

                                                                        
Query: 250  agatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgt 309
            |||| ||||||| |||||||| ||||||||| ||||||| |||||  | ||    ||| |
Sbjct: 2660 agattagatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgccctt 2601

                                        
Query: 310  gtggtcggaggtgtttgggtagagcagc 337
            ||||||||||||||| ||||||||||||
Sbjct: 2600 gtggtcggaggtgttggggtagagcagc 2573
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>gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRNA, partial cds
          Length = 1331

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                        
Query: 255  agatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtggt 314
            ||||||| |||||||| ||||||||| ||||||| |||||  | ||    ||| ||||||
Sbjct: 1084 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 1025

                                   
Query: 315  cggaggtgtttgggtagagcagc 337
            |||||||||| ||||||||||||
Sbjct: 1024 cggaggtgttggggtagagcagc 1002
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>gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full insert mRNA
           sequence
          Length = 1020

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                       
Query: 253 tcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtg 312
           ||||||||| |||||||| ||||||||| | |||||||||||  ||||    ||| ||||
Sbjct: 753 tcagatggagatgctgttggggatgcccttagcggtgagcccggcggcggcgcccttgtg 694

                                  
Query: 313 gtcggaggtgtttgggtagagca 335
            ||||||||||| ||||||||||
Sbjct: 693 atcggaggtgttggggtagagca 671
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>gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, complete cds
          Length = 3003

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                               
Query: 245  tgctcagatcagatggatatgctgttcgggatgcccctggcggtgagcccc 295
            ||||||| ||||||||| | |||||| ||||||||| ||||||||||||||
Sbjct: 2772 tgctcagctcagatggagacgctgttggggatgcccatggcggtgagcccc 2722
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>ref|XM_469412.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2686

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 253  tcagatggatatgctgttcgggatgcccctggcggtgagccc 294
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 2446 tcagatggagatgctgttggggatgcccatggcggtgagccc 2405
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>ref|XM_469411.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3165

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 253  tcagatggatatgctgttcgggatgcccctggcggtgagccc 294
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 2925 tcagatggagatgctgttggggatgcccatggcggtgagccc 2884
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>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                       
Query: 253   tcagatggatatgctgttcgggatgcccctggcggtgagccc 294
             ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 65816 tcagatggagatgctgttggggatgcccatggcggtgagccc 65775
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>gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual positional specificity
            lipoxygenase mRNA, complete cds
          Length = 3154

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 253  tcagatggatatgctgttcgggatgcccctggcggtgagccc 294
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 2919 tcagatggagatgctgttggggatgcccatggcggtgagccc 2878
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>dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H08, full
            insert sequence
          Length = 1560

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 253  tcagatggatatgctgttcgggatgcccctggcggtgagccc 294
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 1332 tcagatggagatgctgttggggatgcccatggcggtgagccc 1291
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>dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O17, full
            insert sequence
          Length = 2851

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 253  tcagatggatatgctgttcgggatgcccctggcggtgagccc 294
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 2597 tcagatggagatgctgttggggatgcccatggcggtgagccc 2556
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>dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H13, full
            insert sequence
          Length = 3167

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 253  tcagatggatatgctgttcgggatgcccctggcggtgagccc 294
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 2927 tcagatggagatgctgttggggatgcccatggcggtgagccc 2886
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>dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079P11, full
            insert sequence
          Length = 1726

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 253  tcagatggatatgctgttcgggatgcccctggcggtgagccc 294
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 1497 tcagatggagatgctgttggggatgcccatggcggtgagccc 1456
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>gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-L2 allele, partial cds
          Length = 2267

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                        
Query: 253  tcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtg 312
            ||||||||| |||||||| ||||||||| |||| ||||||||  ||||    ||  ||||
Sbjct: 2064 tcagatggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtg 2005

                                     
Query: 313  gtcggaggtgtttgggtagagcagc 337
            ||| |||||||| ||||||||||||
Sbjct: 2004 gtcagaggtgttggggtagagcagc 1980
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>gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partial cds
          Length = 1814

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 251  gatcagatggatatgctgttcgggatgcccctggcggtga 290
            ||||||||||| |||||||| ||||||||| |||| ||||
Sbjct: 1558 gatcagatggagatgctgttggggatgcccttggctgtga 1519
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>gb|AY720897.2| Triticum aestivum lipoxygenase gene, partial sequence
          Length = 934

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 62/75 (82%)
 Strand = Plus / Plus

                                                                       
Query: 263 atgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtggtcggaggtg 322
           |||||||| ||||||||| |||||||||| ||  ||||    ||| |||||||  |||||
Sbjct: 1   atgctgttggggatgcccttggcggtgaggccggcggcggcacccttgtggtcttaggtg 60

                          
Query: 323 tttgggtagagcagc 337
           || ||||||||||||
Sbjct: 61  ttagggtagagcagc 75
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>ref|XM_483279.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3198

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 252  atcagatggatatgctgttcgggatgcccctggcggtga 290
            ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 2978 atcagatggatgtgctgttggggatgcccatgccggtga 2940
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>gb|AC137004.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0615D12,
              complete sequence
          Length = 155402

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 126    ccttattgccttaattattcatg 148
              |||||||||||||||||||||||
Sbjct: 136193 ccttattgccttaattattcatg 136215



 Score = 46.1 bits (23), Expect = 0.072
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 126   ccttattgccttaattattcatg 148
             |||||||||||||||||||||||
Sbjct: 94214 ccttattgccttaattattcatg 94236
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                       
Query: 252      atcagatggatatgctgttcgggatgcccctggcggtga 290
                ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 25242576 atcagatggatgtgctgttggggatgcccatgccggtga 25242538



 Score = 46.1 bits (23), Expect = 0.072
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                       
Query: 252      atcagatggatatgctgttcgggatgcccctggcggtga 290
                ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 25209453 atcagatggatgtgctgttggggatgcccatgccggtga 25209491
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 126      ccttattgccttaattattcatg 148
                |||||||||||||||||||||||
Sbjct: 21745017 ccttattgccttaattattcatg 21745039



 Score = 46.1 bits (23), Expect = 0.072
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 126      ccttattgccttaattattcatg 148
                |||||||||||||||||||||||
Sbjct: 21703038 ccttattgccttaattattcatg 21703060
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>dbj|AP005816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1168A08
          Length = 138135

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                     
Query: 252    atcagatggatatgctgttcgggatgcccctggcggtga 290
              ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 107699 atcagatggatgtgctgttggggatgcccatgccggtga 107661



 Score = 46.1 bits (23), Expect = 0.072
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 252   atcagatggatatgctgttcgggatgcccctggcggtga 290
             ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 74576 atcagatggatgtgctgttggggatgcccatgccggtga 74614
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>dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0016N23
          Length = 147336

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 252   atcagatggatatgctgttcgggatgcccctggcggtga 290
             ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 17761 atcagatggatgtgctgttggggatgcccatgccggtga 17723
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>dbj|AK066825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075A10, full
            insert sequence
          Length = 3196

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 252  atcagatggatatgctgttcgggatgcccctggcggtga 290
            ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 2976 atcagatggatgtgctgttggggatgcccatgccggtga 2938
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>gb|AF095896.1|AF095896 Oryza sativa lipoxygenase (CM-LOX2) mRNA, partial cds
          Length = 2232

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 252  atcagatggatatgctgttcgggatgcccctggcggtga 290
            ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 2053 atcagatggatgtgctgttggggatgcccatgccggtga 2015
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>gb|AF095895.1|AF095895 Oryza sativa lipoxygenase (CM-LOX1) mRNA, partial cds
          Length = 2664

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 252  atcagatggatatgctgttcgggatgcccctggcggtga 290
            ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 2461 atcagatggatgtgctgttggggatgcccatgccggtga 2423
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>dbj|D14000.1|RICL2OP Oryza sativa (japonica cultivar-group) lox2osPil mRNA for
            lipoxygenase, complete cds
          Length = 3007

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 252  atcagatggatatgctgttcgggatgcccctggcggtga 290
            ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 2891 atcagatggatgtgctgttggggatgcccatgccggtga 2853
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>ref|XM_464447.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3123

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 253  tcagatggatatgctgttcgggatgcccct 282
            ||||||||| |||||||| |||||||||||
Sbjct: 2881 tcagatggagatgctgtttgggatgcccct 2852
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 253     tcagatggatatgctgttcgggatgcccct 282
               ||||||||| |||||||| |||||||||||
Sbjct: 5276963 tcagatggagatgctgtttgggatgcccct 5276992
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>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1225_F07
          Length = 142772

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 253  tcagatggatatgctgttcgggatgcccct 282
            ||||||||| |||||||| |||||||||||
Sbjct: 3266 tcagatggagatgctgtttgggatgcccct 3295
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>dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074B03, full
            insert sequence
          Length = 3160

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 253  tcagatggatatgctgttcgggatgcccct 282
            ||||||||| |||||||| |||||||||||
Sbjct: 2880 tcagatggagatgctgtttgggatgcccct 2851
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>dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-B01, full
            insert sequence
          Length = 2250

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 253  tcagatggatatgctgttcgggatgcccct 282
            ||||||||| |||||||| |||||||||||
Sbjct: 2042 tcagatggagatgctgtttgggatgcccct 2013
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>gb|AY111869.1| Zea mays CL452_-8 mRNA sequence
          Length = 568

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 257 atggatatgctgttcgggatgcccctggcggtgagcccctcg 298
           ||||| |||||||| || |||||| |||| ||||||||||||
Sbjct: 363 atggagatgctgttgggaatgcccatggcagtgagcccctcg 322
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>gb|AY103567.1| Zea mays PCO116252 mRNA sequence
          Length = 3135

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                          
Query: 257  atggatatgctgttcgggatgcccctggcggtgagcccctcggcct 302
            ||||| |||||||| || |||||| |||| || |||||||||||||
Sbjct: 2896 atggagatgctgttgggaatgcccatggcagtaagcccctcggcct 2851
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>emb|Z82288.2|CEZK896 Caenorhabditis elegans Cosmid ZK896, complete sequence
          Length = 37711

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 33    aaacaagggattttttctgca 53
             |||||||||||||||||||||
Sbjct: 32565 aaacaagggattttttctgca 32585
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>gb|DQ428248.1| Sorghum propinquum locus PRC0271 genomic sequence
          Length = 810

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 313 gtcggaggtgtttgggtagagcagc 337
           |||||||||||| ||||||||||||
Sbjct: 736 gtcggaggtgttggggtagagcagc 712
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>gb|DQ428247.1| Sorghum bicolor voucher PI585454 locus PRC0271 genomic sequence
          Length = 805

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 313 gtcggaggtgtttgggtagagcagc 337
           |||||||||||| ||||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagc 707
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>gb|DQ428246.1| Sorghum bicolor voucher PI267539 locus PRC0271 genomic sequence
          Length = 805

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 313 gtcggaggtgtttgggtagagcagc 337
           |||||||||||| ||||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagc 707
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>gb|DQ428245.1| Sorghum bicolor voucher PI267408 locus PRC0271 genomic sequence
          Length = 805

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 313 gtcggaggtgtttgggtagagcagc 337
           |||||||||||| ||||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagc 707
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>gb|DQ428244.1| Sorghum bicolor voucher PI221607 locus PRC0271 genomic sequence
          Length = 805

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 313 gtcggaggtgtttgggtagagcagc 337
           |||||||||||| ||||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagc 707
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>gb|DQ428243.1| Sorghum bicolor voucher PI152702 locus PRC0271 genomic sequence
          Length = 805

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 313 gtcggaggtgtttgggtagagcagc 337
           |||||||||||| ||||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagc 707
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>gb|DQ428242.1| Sorghum bicolor voucher NSL92371 locus PRC0271 genomic sequence
          Length = 805

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 313 gtcggaggtgtttgggtagagcagc 337
           |||||||||||| ||||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagc 707
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>gb|DQ428241.1| Sorghum bicolor voucher NSL87902 locus PRC0271 genomic sequence
          Length = 805

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 313 gtcggaggtgtttgggtagagcagc 337
           |||||||||||| ||||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagc 707
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>gb|DQ428240.1| Sorghum bicolor voucher NSL87666 locus PRC0271 genomic sequence
          Length = 805

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 313 gtcggaggtgtttgggtagagcagc 337
           |||||||||||| ||||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagc 707
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>gb|DQ428239.1| Sorghum bicolor voucher NSL77217 locus PRC0271 genomic sequence
          Length = 805

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 313 gtcggaggtgtttgggtagagcagc 337
           |||||||||||| ||||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagc 707
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>gb|DQ428238.1| Sorghum bicolor voucher NSL77034 locus PRC0271 genomic sequence
          Length = 805

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 313 gtcggaggtgtttgggtagagcagc 337
           |||||||||||| ||||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagc 707
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>gb|DQ428237.1| Sorghum bicolor voucher NSL55243 locus PRC0271 genomic sequence
          Length = 805

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 313 gtcggaggtgtttgggtagagcagc 337
           |||||||||||| ||||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagc 707
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>gb|DQ428236.1| Sorghum bicolor voucher NSL51365 locus PRC0271 genomic sequence
          Length = 805

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 313 gtcggaggtgtttgggtagagcagc 337
           |||||||||||| ||||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagc 707
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>gb|DQ428235.1| Sorghum bicolor voucher NSL51030 locus PRC0271 genomic sequence
          Length = 805

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 313 gtcggaggtgtttgggtagagcagc 337
           |||||||||||| ||||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagc 707
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>gb|DQ428234.1| Sorghum bicolor voucher BTx623 locus PRC0271 genomic sequence
          Length = 805

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 313 gtcggaggtgtttgggtagagcagc 337
           |||||||||||| ||||||||||||
Sbjct: 731 gtcggaggtgttggggtagagcagc 707
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>emb|BX294385.17| Zebrafish DNA sequence from clone CH211-197E8 in linkage group 24,
             complete sequence
          Length = 155584

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 30    gcaaaacaagggattttttct 50
             |||||||||||||||||||||
Sbjct: 39634 gcaaaacaagggattttttct 39614
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>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds
          Length = 2845

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 313  gtcggaggtgtttgggtagagcagc 337
            |||||||||||| ||||||||||||
Sbjct: 2562 gtcggaggtgttggggtagagcagc 2538
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>gb|AY110522.1| Zea mays CL4677_2 mRNA sequence
          Length = 1304

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 251 gatcagatggatatgctgttcgggatgcccct 282
           ||||||||||| |||||| | |||||||||||
Sbjct: 132 gatcagatggagatgctgctggggatgcccct 163
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>gb|AY104322.1| Zea mays PCO093659 mRNA sequence
          Length = 1439

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 251  gatcagatggatatgctgttcgggatgcccct 282
            ||||||||||| |||||| | |||||||||||
Sbjct: 1216 gatcagatggagatgctgctggggatgcccct 1185


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,982,209
Number of Sequences: 3902068
Number of extensions: 1982209
Number of successful extensions: 36200
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 36028
Number of HSP's gapped (non-prelim): 171
length of query: 337
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 315
effective length of database: 17,147,199,772
effective search space: 5401367928180
effective search space used: 5401367928180
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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