Clone Name | rbastl12f02 |
---|---|
Clone Library Name | barley_pub |
>HUTU_XANCP (P58988) Urocanate hydratase (EC 4.2.1.49) (Urocanase)| (Imidazolonepropionate hydrolase) Length = 555 Score = 28.9 bits (63), Expect = 5.2 Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 11/49 (22%) Frame = -3 Query: 414 DGRRLQRWTD-----------PARVRWRGVSRQNRGGLGLNAAAVQGVL 301 D L RW D PAR+ W G+ ++R GL NA G L Sbjct: 384 DDAHLHRWLDMAAEKIAFQGLPARICWVGLGDRHRLGLAFNAMVRSGEL 432
>HUTU_XANAC (P58987) Urocanate hydratase (EC 4.2.1.49) (Urocanase)| (Imidazolonepropionate hydrolase) Length = 555 Score = 28.9 bits (63), Expect = 5.2 Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 11/49 (22%) Frame = -3 Query: 414 DGRRLQRWTD-----------PARVRWRGVSRQNRGGLGLNAAAVQGVL 301 D L RW D PAR+ W G+ ++R GL NA G L Sbjct: 384 DDAHLHRWLDMAADKIAFQGLPARICWVGLGDRHRLGLAFNAMVRSGEL 432
>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)| Length = 999 Score = 28.9 bits (63), Expect = 5.2 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Frame = -1 Query: 344 EEVLDLTL-LPSKECLVSAVRVGLNCTRAAPYERMSMRDAAAELRTIRDA 198 E V+D L L KE + + +GL CT P R SMR L+ + A Sbjct: 921 EPVIDPKLDLKFKEEISKVIHIGLLCTSPLPLNRPSMRKVVIMLQEVSGA 970
>CLAT_RAT (P32738) Choline O-acetyltransferase (EC 2.3.1.6) (CHOACTase)| (Choline acetylase) (ChAT) Length = 639 Score = 28.1 bits (61), Expect = 8.8 Identities = 15/38 (39%), Positives = 16/38 (42%) Frame = -3 Query: 231 RGRRAAHDQRCLCPGLNRGYCWLLGFSSGRDVQCSTVC 118 R + H C G NR Y L F GRD C VC Sbjct: 294 RALQLLHGGGCSLNGANRWYDKSLQFVVGRDGTCGVVC 331
>CLAT_MOUSE (Q03059) Choline O-acetyltransferase (EC 2.3.1.6) (CHOACTase)| (Choline acetylase) (ChAT) Length = 640 Score = 28.1 bits (61), Expect = 8.8 Identities = 15/38 (39%), Positives = 16/38 (42%) Frame = -3 Query: 231 RGRRAAHDQRCLCPGLNRGYCWLLGFSSGRDVQCSTVC 118 R + H C G NR Y L F GRD C VC Sbjct: 295 RALQLLHGGGCSLNGANRWYDKSLQFVVGRDGTCGVVC 332
>NINAC_DROME (P10676) Neither inactivation nor afterpotential protein C (EC| 2.7.11.1) Length = 1501 Score = 28.1 bits (61), Expect = 8.8 Identities = 12/18 (66%), Positives = 16/18 (88%), Gaps = 1/18 (5%) Frame = -1 Query: 281 GLN-CTRAAPYERMSMRD 231 GLN CTRA P+ER++MR+ Sbjct: 1155 GLNKCTRAVPFERINMRE 1172 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,933,113 Number of Sequences: 219361 Number of extensions: 1140043 Number of successful extensions: 2990 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2939 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2990 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)