>DHSB_YEAST (P21801) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 266

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = -1

Query: 252 KTEVNDNMATPFRNKILNCLQQCPKGSTKGVLLAELR 142
           K  +N++M+    + I+NC + CPKG   G+ +AE++
Sbjct: 224 KAMLNNSMSLYRCHTIMNCTRTCPKGLNPGLAIAEIK 260

>DHSB_MOUSE (Q9CQA3) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (Ip) (Iron-sulfur
           subunit of complex II)
          Length = 282

 Score = 30.8 bits (68), Expect = 0.93
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -1

Query: 207 ILNCLQQCPKGSTKGVLLAELRNL 136
           I+NC Q CPKG   G  +AE++ +
Sbjct: 248 IMNCTQTCPKGLNPGKAIAEIKKM 271

>DHSB_MYCGR (O42772) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 297

 Score = 30.8 bits (68), Expect = 0.93
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = -1

Query: 252 KTEVNDNMATPFRNKILNCLQQCPKGSTKGVLLAELR 142
           K  +N++M+    + ILNC + CPKG    + +AE++
Sbjct: 254 KDALNNSMSLYRCHTILNCSRTCPKGLNPALAIAEIK 290

>DHSB_ASHGO (Q75CI4) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 261

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = -1

Query: 258 GYKTEVNDNMATPFRNKILNCLQQCPKGSTKGVLLAELR 142
           G + ++ + M+    + I+NC + CPKG   G  +AE++
Sbjct: 217 GRREQLQNAMSVYRCHTIMNCTRTCPKGLNPGKAIAEIK 255

>DHSB_SCHPO (P21911) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 252

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = -1

Query: 252 KTEVNDNMATPFR-NKILNCLQQCPKGSTKGVLLAELRNL 136
           + +V  N  + +R + I+NC + CPKG   G+ +A+++ L
Sbjct: 209 RLDVMQNSMSVYRCHTIMNCARTCPKGLNPGLAIAKVKAL 248

>EXO70_CANGA (Q6FJW2) Exocyst complex protein EXO70|
          Length = 623

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 16/53 (30%), Positives = 30/53 (56%)
 Frame = +2

Query: 77  IFNPV*TKLSQTTILVSLQGKFLSSANNTPLVEPFGHCCRQFKILLRKGVAML 235
           +F P+   L++  +L +LQ    S+ N+   V+   +   + ++LLRKG+A L
Sbjct: 45  LFGPI---LARNNVLKTLQRNIDSTLNSVASVKDLANEASKHEVLLRKGIASL 94

>DHSB_DROME (P21914) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 297

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -1

Query: 207 ILNCLQQCPKGSTKGVLLAELRNL 136
           I+NC + CPKG   G  +AE++ L
Sbjct: 255 IMNCTRTCPKGLNPGRAIAEIKKL 278

>DHSB_CANGA (Q6FWS8) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 253

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -1

Query: 252 KTEVNDNMATPFRNKILNCLQQCPKGSTKGVLLAELR 142
           +T + ++M+    + I+NC + CPKG   G  +AE++
Sbjct: 211 RTMLQNSMSLYRCHTIMNCTRTCPKGLNPGRSIAEIK 247

>DHSB_HUMAN (P21912) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (Ip) (Iron-sulfur
           subunit of complex II)
          Length = 280

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -1

Query: 207 ILNCLQQCPKGSTKGVLLAELRNL 136
           I+NC + CPKG   G  +AE++ +
Sbjct: 246 IMNCTRTCPKGLNPGKAIAEIKKM 269

>HIS4_METAC (Q8TU55) 1-(5-phosphoribosyl)-5-[(5-|
           phosphoribosylamino)methylideneamino]
           imidazole-4-carboxamide isomerase (EC 5.3.1.16)
           (Phosphoribosylformimino-5-aminoimidazole carboxamide
           ribotide isomerase)
          Length = 245

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +2

Query: 98  KLSQTTILVSLQGKFLSSANNTPLVEPFGHCCRQFKILLRKGVAMLSF 241
           K ++T  LV L G       N P++E     CR+  + ++ G  + SF
Sbjct: 44  KGAKTLHLVDLDGAIEGERKNAPIIEKIVQACREKGVSIQVGGGIRSF 91

>AATC_ORYSA (P37833) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1)|
           (Transaminase A)
          Length = 407

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -2

Query: 281 LADAIHAAVTKLK 243
           LADAIHAAVTKLK
Sbjct: 395 LADAIHAAVTKLK 407

>SSB1_STRA5 (P66851) Single-stranded DNA-binding protein 1 (SSB 1)|
           (Helix-destabilizing protein 1)
          Length = 163

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +1

Query: 88  GVNKTVSNNNFSKSTRQIPEFSQ 156
           G N   SNN++S S++Q P FS+
Sbjct: 121 GYNNAPSNNSYSASSQQTPNFSR 143

>SSB1_STRA3 (P66850) Single-stranded DNA-binding protein 1 (SSB 1)|
           (Helix-destabilizing protein 1)
          Length = 163

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +1

Query: 88  GVNKTVSNNNFSKSTRQIPEFSQ 156
           G N   SNN++S S++Q P FS+
Sbjct: 121 GYNNAPSNNSYSASSQQTPNFSR 143

>HIS4_METMA (Q8PWS2) 1-(5-phosphoribosyl)-5-[(5-|
           phosphoribosylamino)methylideneamino]
           imidazole-4-carboxamide isomerase (EC 5.3.1.16)
           (Phosphoribosylformimino-5-aminoimidazole carboxamide
           ribotide isomerase)
          Length = 246

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 13/49 (26%), Positives = 26/49 (53%)
 Frame = +2

Query: 95  TKLSQTTILVSLQGKFLSSANNTPLVEPFGHCCRQFKILLRKGVAMLSF 241
           +K ++T  LV L G       N+P++E   + C++  + ++ G  + SF
Sbjct: 43  SKGAKTLHLVDLDGAIEGERKNSPIIEKIVNTCKEKGVSIQVGGGIRSF 91

>DHSB_PARDE (Q59662) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)|
          Length = 259

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 11/38 (28%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
 Frame = -1

Query: 237 DNMATPFR----NKILNCLQQCPKGSTKGVLLAELRNL 136
           D++  PF+    + I+NC   CPKG      +A ++++
Sbjct: 216 DSLEDPFKLYRCHTIMNCTNTCPKGLNPAKAIASIKHM 253


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,645,461
Number of Sequences: 219361
Number of extensions: 686367
Number of successful extensions: 1727
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1724
length of database: 80,573,946
effective HSP length: 69
effective length of database: 65,438,037
effective search space used: 1570512888
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)