ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl12e08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB028870.1| Hordeum vulgare Hv-MMT1 mRNA for S-adenosyl-L-me... 375 e-101
2gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118... 42 0.60
3ref|NM_120230.2| Arabidopsis thaliana protein binding / ubiquiti... 40 2.4
4ref|NM_202992.1| Arabidopsis thaliana protein binding / zinc ion... 40 2.4
5gb|AC159418.1| Trypanosoma brucei chromosome 5 clone RPCI93-25N2... 40 2.4
6gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence 40 2.4
7gb|AC124779.4| Mus musculus BAC clone RP23-100O18 from chromosom... 40 2.4
8emb|Z70752.1|CEF25B3 Caenorhabditis elegans Cosmid F25B3, comple... 40 2.4
9gb|AC141864.7| Medicago truncatula clone mth2-21o24, complete se... 40 2.4
10emb|AL354807.6| Human DNA sequence from clone RP11-522F22 on chr... 40 2.4
11gb|AY091999.1| Macaca sp. phenylalanine hydroxylase gene, partia... 40 2.4
12gb|AY091998.1| Pongo pygmaeus phenylalanine hydroxylase gene, pa... 40 2.4
13gb|AY091997.1| Gorilla gorilla phenylalanine hydroxylase gene, p... 40 2.4
14gb|AY091165.1| Arabidopsis thaliana unknown protein (At5g01520) ... 40 2.4
15gb|AY056355.1| Arabidopsis thaliana unknown protein (At5g01520) ... 40 2.4
16gb|AY050835.1| Arabidopsis thaliana unknown protein (At5g01520) ... 40 2.4
17gb|AF370144.1| Arabidopsis thaliana unknown protein (At5g01520) ... 40 2.4
18emb|AL161946.1|ATF7A7 Arabidopsis thaliana DNA chromosome 5, BAC... 40 2.4
19gb|AC069227.24| Homo sapiens 12 BAC RP11-478G16 (Roswell Park Ca... 40 2.4
20dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 40 2.4
21gb|AF404777.1| Homo sapiens phenylalanine hydroxylase (PAH) gene... 40 2.4
22ref|NM_073072.3| Caenorhabditis elegans F25B3.6 (F25B3.6) mRNA, ... 40 2.4
23gb|DQ059129.1| Arabidopsis thaliana RING finger family protein (... 40 2.4
24gb|AF204239.1|AF204239 Homo sapiens phenylalanine hydroxylase ge... 40 2.4
25emb|AL591807.1|CNS07EGQ Human chromosome 14 DNA sequence BAC R-1... 40 2.4
26gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome 40 2.4
27gb|AC133935.3| Mus musculus BAC clone RP24-387M21 from 3, comple... 40 2.4
28gb|AC132225.3| Mus musculus BAC clone RP24-558H21 from 3, comple... 40 2.4
29gb|BC088893.1| Xenopus tropicalis cDNA clone IMAGE:7006139 38 9.3
30gb|AC119899.8| Mus musculus chromosome 5, clone RP24-235E5, comp... 38 9.3
31ref|NM_207654.1| Mus musculus ephrin A5 (Efna5), transcript vari... 38 9.3
32ref|NM_010109.2| Mus musculus ephrin A5 (Efna5), transcript vari... 38 9.3
33gb|BC040218.1| Mus musculus ephrin A5, transcript variant 1, mRN... 38 9.3
34ref|XM_957789.1| Neurospora crassa OR74A hypothetical protein (N... 38 9.3
35ref|XM_326132.1| Neurospora crassa OR74A hypothetical protein (N... 38 9.3
36gb|AC134243.3| Mus musculus BAC clone RP24-90E15 from chromosome... 38 9.3
37emb|CT009717.9| Mouse DNA sequence from clone RP23-216H9 on chro... 38 9.3
38ref|XM_800556.1| Trypanosoma cruzi strain CL Brener hypothetical... 38 9.3
39emb|Z66520.1|CEF49E12 Caenorhabditis elegans Cosmid F49E12, comp... 38 9.3
40gb|AC149806.16| Medicago truncatula clone mth2-150h12, complete ... 38 9.3
41gb|AC153125.10| Medicago truncatula clone mth2-74f16, complete s... 38 9.3
42emb|AL137853.12| Human DNA sequence from clone RP4-562N20 on chr... 38 9.3
43gb|AC161185.5| Mus musculus chromosome 5, clone RP23-297D16, com... 38 9.3
44emb|AL773510.5| Mouse DNA sequence from clone RP24-200F10 on chr... 38 9.3
45emb|AJ296569.1|UBA296569 Uncultured bacterium GR-WP33-30 16S rRN... 38 9.3
46gb|AC091155.5| Homo sapiens chromosome 17, clone CTD1-2306D4, co... 38 9.3
47gb|AF407036.1| Plocepasser mahali tRNA-Met gene, partial sequenc... 38 9.3
48gb|AC103864.2| Homo sapiens chromosome 8, clone RP11-192P9, comp... 38 9.3
49gb|AC093878.3| Homo sapiens BAC clone RP11-638O6 from 4, complet... 38 9.3
50gb|AC021818.9| Homo sapiens chromosome 15, clone RP11-19J5, comp... 38 9.3
51gb|AC079090.4| Homo sapiens chromosome 15, clone RP11-268O3, com... 38 9.3
52gb|AF325335.1|F325326S10 Homo sapiens macrophin 1 isoforms (MACF... 38 9.3
53ref|XM_680910.1| PREDICTED: Danio rerio similar to Mrpl47 protei... 38 9.3
54gb|AE003738.3| Drosophila melanogaster chromosome 3R, section 76... 38 9.3
55gb|AC019246.6|AC019246 Homo sapiens, clone RP11-2K18, complete s... 38 9.3
56gb|AC121324.5| Homo sapiens chromosome 15, clone RP11-959E3, com... 38 9.3
57gb|AC009915.5|AC009915 Drosophila melanogaster, chromosome 3R, r... 38 9.3
58gb|AC150255.7| Aedes aegypti, clone XX-85K2, complete sequence 38 9.3
59gb|AC007496.6| Homo sapiens chromosome 16 clone RP11-357N13, com... 38 9.3
60gb|AC124091.16| Homo sapiens chromosome 15, clone RP11-640H21, c... 38 9.3
61gb|AE016830.1| Enterococcus faecalis V583, complete genome 38 9.3
62emb|CR388150.14| Zebrafish DNA sequence from clone DKEY-115A2 in... 38 9.3
63gb|AC163697.3| Gallus gallus BAC clone CH261-186A14 from chromos... 38 9.3
64gb|AC159009.2| Gallus gallus BAC clone CH261-189M12 from chromos... 38 9.3
65gb|AC154248.2| Mus musculus BAC clone RP24-182I14 from chromosom... 38 9.3
66emb|AL928701.7| Zebrafish DNA sequence from clone CH211-201H21, ... 38 9.3
67emb|AL731701.8| Mouse DNA sequence from clone RP23-140L6 on chro... 38 9.3 
>dbj|AB028870.1| Hordeum vulgare Hv-MMT1 mRNA for S-adenosyl-L-methionine:
            L-methionine S-methyltransferase, complete cds
          Length = 3543

 Score =  375 bits (189), Expect = e-101
 Identities = 189/189 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    gattcaacgcttttattccttttttgattcgaaacaaagttgttcaaacaggcaaagaaa 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3473 gattcaacgcttttattccttttttgattcgaaacaaagttgttcaaacaggcaaagaaa 3414

                                                                        
Query: 61   gataagagttggttccccttcaggttttacagtttcttcacccacttgacccacccaaca 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3413 gataagagttggttccccttcaggttttacagtttcttcacccacttgacccacccaaca 3354

                                                                        
Query: 121  acccctagttgctaccattcaccttagcaccgccaccaaggaccagctccctgaaccggg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3353 acccctagttgctaccattcaccttagcaccgccaccaaggaccagctccctgaaccggg 3294

                     
Query: 181  cgatgcact 189
            |||||||||
Sbjct: 3293 cgatgcact 3285
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>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome
          Length = 1827111

 Score = 42.1 bits (21), Expect = 0.60
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 78     cttcaggttttacagtttctt 98
              |||||||||||||||||||||
Sbjct: 897732 cttcaggttttacagtttctt 897712
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>ref|NM_120230.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/
           zinc ion binding AT5G01520 transcript variant
           AT5G01520.1 mRNA, complete cds
          Length = 1306

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 26  gattcgaaacaaagttgttc 45
           ||||||||||||||||||||
Sbjct: 818 gattcgaaacaaagttgttc 837
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>ref|NM_202992.1| Arabidopsis thaliana protein binding / zinc ion binding AT5G01520
           transcript variant AT5G01520.2 mRNA, complete cds
          Length = 1325

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 26  gattcgaaacaaagttgttc 45
           ||||||||||||||||||||
Sbjct: 818 gattcgaaacaaagttgttc 837
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>gb|AC159418.1| Trypanosoma brucei chromosome 5 clone RPCI93-25N21, complete sequence
          Length = 80752

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 2     attcaacgcttttattcctttttt 25
             |||||||| |||||||||||||||
Sbjct: 42201 attcaacgtttttattcctttttt 42224
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>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence
          Length = 1608198

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 2     attcaacgcttttattcctttttt 25
             |||||||| |||||||||||||||
Sbjct: 38552 attcaacgtttttattcctttttt 38529
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>gb|AC124779.4| Mus musculus BAC clone RP23-100O18 from chromosome 6, complete sequence
          Length = 197482

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    cttttattccttttttgatt 29
             ||||||||||||||||||||
Sbjct: 66041 cttttattccttttttgatt 66022
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>emb|Z70752.1|CEF25B3 Caenorhabditis elegans Cosmid F25B3, complete sequence
          Length = 30182

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    ttttattccttttttgattc 30
             ||||||||||||||||||||
Sbjct: 29284 ttttattccttttttgattc 29265
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>gb|AC141864.7| Medicago truncatula clone mth2-21o24, complete sequence
          Length = 106571

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 77     ccttcaggttttacagtttcttca 100
              ||||||||||| ||||||||||||
Sbjct: 100223 ccttcaggtttcacagtttcttca 100246
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>emb|AL354807.6| Human DNA sequence from clone RP11-522F22 on chromosome 13 Contains a
             DnaJ (Hsp40) homolog, subfamily A, member 1 (DNAJA1)
             pseudogene, complete sequence
          Length = 157135

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    aaagttgttcaaacaggcaa 55
             ||||||||||||||||||||
Sbjct: 24310 aaagttgttcaaacaggcaa 24329
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>gb|AY091999.1| Macaca sp. phenylalanine hydroxylase gene, partial cds
          Length = 1149

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 50  aggcaaagaaagataagagt 69
           ||||||||||||||||||||
Sbjct: 427 aggcaaagaaagataagagt 408
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>gb|AY091998.1| Pongo pygmaeus phenylalanine hydroxylase gene, partial cds
          Length = 1148

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 50  aggcaaagaaagataagagt 69
           ||||||||||||||||||||
Sbjct: 427 aggcaaagaaagataagagt 408
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>gb|AY091997.1| Gorilla gorilla phenylalanine hydroxylase gene, partial cds
          Length = 1148

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 50  aggcaaagaaagataagagt 69
           ||||||||||||||||||||
Sbjct: 427 aggcaaagaaagataagagt 408
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>gb|AY091165.1| Arabidopsis thaliana unknown protein (At5g01520) mRNA, complete cds
          Length = 760

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 26  gattcgaaacaaagttgttc 45
           ||||||||||||||||||||
Sbjct: 453 gattcgaaacaaagttgttc 472
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>gb|AY056355.1| Arabidopsis thaliana unknown protein (At5g01520) mRNA, complete cds
          Length = 550

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 26  gattcgaaacaaagttgttc 45
           ||||||||||||||||||||
Sbjct: 453 gattcgaaacaaagttgttc 472
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>gb|AY050835.1| Arabidopsis thaliana unknown protein (At5g01520) mRNA, complete cds
          Length = 1285

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 26  gattcgaaacaaagttgttc 45
           ||||||||||||||||||||
Sbjct: 818 gattcgaaacaaagttgttc 837
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>gb|AF370144.1| Arabidopsis thaliana unknown protein (At5g01520) mRNA, complete cds
          Length = 1327

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 26  gattcgaaacaaagttgttc 45
           ||||||||||||||||||||
Sbjct: 818 gattcgaaacaaagttgttc 837
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>emb|AL161946.1|ATF7A7 Arabidopsis thaliana DNA chromosome 5, BAC clone F7A7 (ESSA project)
          Length = 86690

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    gattcgaaacaaagttgttc 45
             ||||||||||||||||||||
Sbjct: 15695 gattcgaaacaaagttgttc 15714
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>gb|AC069227.24| Homo sapiens 12 BAC RP11-478G16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 167398

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    aggcaaagaaagataagagt 69
             ||||||||||||||||||||
Sbjct: 88691 aggcaaagaaagataagagt 88672
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>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012
          Length = 2668010

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 56      agaaagataagagttggttc 75
               ||||||||||||||||||||
Sbjct: 2524950 agaaagataagagttggttc 2524969
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>gb|AF404777.1| Homo sapiens phenylalanine hydroxylase (PAH) gene, complete cds
          Length = 171266

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    aggcaaagaaagataagagt 69
             ||||||||||||||||||||
Sbjct: 92558 aggcaaagaaagataagagt 92539
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>ref|NM_073072.3| Caenorhabditis elegans F25B3.6 (F25B3.6) mRNA, complete cds
          Length = 2356

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 11   ttttattccttttttgattc 30
            ||||||||||||||||||||
Sbjct: 2225 ttttattccttttttgattc 2244
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>gb|DQ059129.1| Arabidopsis thaliana RING finger family protein (At5g01520) mRNA,
           complete cds
          Length = 729

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 26  gattcgaaacaaagttgttc 45
           ||||||||||||||||||||
Sbjct: 453 gattcgaaacaaagttgttc 472
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>gb|AF204239.1|AF204239 Homo sapiens phenylalanine hydroxylase gene, intron 7, complete
           sequence
          Length = 1058

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 50  aggcaaagaaagataagagt 69
           ||||||||||||||||||||
Sbjct: 373 aggcaaagaaagataagagt 354
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>emb|AL591807.1|CNS07EGQ Human chromosome 14 DNA sequence BAC R-1047D15 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 183418

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    ataagagttggttccccttc 81
             ||||||||||||||||||||
Sbjct: 28958 ataagagttggttccccttc 28939
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>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 63      taagagttggttccccttca 82
               ||||||||||||||||||||
Sbjct: 1761075 taagagttggttccccttca 1761056
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>gb|AC133935.3| Mus musculus BAC clone RP24-387M21 from 3, complete sequence
          Length = 182101

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 45     caaacaggcaaagaaagataagag 68
              |||||||||||| |||||||||||
Sbjct: 160718 caaacaggcaaacaaagataagag 160741
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>gb|AC132225.3| Mus musculus BAC clone RP24-558H21 from 3, complete sequence
          Length = 189301

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 45    caaacaggcaaagaaagataagag 68
             |||||||||||| |||||||||||
Sbjct: 28917 caaacaggcaaacaaagataagag 28940
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>gb|BC088893.1| Xenopus tropicalis cDNA clone IMAGE:7006139
          Length = 1582

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 64  aagagttggttccccttcaggtt 86
           |||||||||||| ||||||||||
Sbjct: 519 aagagttggttcaccttcaggtt 541
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>gb|AC119899.8| Mus musculus chromosome 5, clone RP24-235E5, complete sequence
          Length = 210751

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 11   ttttattccttttttgatt 29
            |||||||||||||||||||
Sbjct: 2811 ttttattccttttttgatt 2829
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>ref|NM_207654.1| Mus musculus ephrin A5 (Efna5), transcript variant 1, mRNA
          Length = 3473

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 109  acccacccaacaacccctagttg 131
            ||||||||||||||||| |||||
Sbjct: 1049 acccacccaacaaccccaagttg 1027
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>ref|NM_010109.2| Mus musculus ephrin A5 (Efna5), transcript variant 2, mRNA
          Length = 3392

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 109 acccacccaacaacccctagttg 131
           ||||||||||||||||| |||||
Sbjct: 968 acccacccaacaaccccaagttg 946
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>gb|BC040218.1| Mus musculus ephrin A5, transcript variant 1, mRNA (cDNA clone
            MGC:36080 IMAGE:4954352), complete cds
          Length = 3474

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 109  acccacccaacaacccctagttg 131
            ||||||||||||||||| |||||
Sbjct: 1049 acccacccaacaaccccaagttg 1027
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>ref|XM_957789.1| Neurospora crassa OR74A hypothetical protein (NCU06278.1) partial
            mRNA
          Length = 3252

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 151  cgccaccaaggaccagctc 169
            |||||||||||||||||||
Sbjct: 2511 cgccaccaaggaccagctc 2529
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>ref|XM_326132.1| Neurospora crassa OR74A hypothetical protein (NCU06278.1) partial
            mRNA
          Length = 3252

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 151  cgccaccaaggaccagctc 169
            |||||||||||||||||||
Sbjct: 2511 cgccaccaaggaccagctc 2529
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>gb|AC134243.3| Mus musculus BAC clone RP24-90E15 from chromosome 17, complete sequence
          Length = 193151

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 109   acccacccaacaacccctagttg 131
             ||||||||||||||||| |||||
Sbjct: 54826 acccacccaacaaccccaagttg 54848
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>emb|CT009717.9| Mouse DNA sequence from clone RP23-216H9 on chromosome 13, complete
            sequence
          Length = 220233

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 47   aacaggcaaagaaagataagagt 69
            ||||||||||| |||||||||||
Sbjct: 4898 aacaggcaaaggaagataagagt 4876
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>ref|XM_800556.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053508803.10) partial mRNA
          Length = 492

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 9   gcttttattccttttttga 27
           |||||||||||||||||||
Sbjct: 446 gcttttattccttttttga 464
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>emb|Z66520.1|CEF49E12 Caenorhabditis elegans Cosmid F49E12, complete sequence
          Length = 40450

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 11    ttttattccttttttgatt 29
             |||||||||||||||||||
Sbjct: 27545 ttttattccttttttgatt 27527
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>gb|AC149806.16| Medicago truncatula clone mth2-150h12, complete sequence
          Length = 113593

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 11    ttttattccttttttgattcgaaacaa 37
             ||||||||||||||| |||| ||||||
Sbjct: 45122 ttttattccttttttaattccaaacaa 45148
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>gb|AC153125.10| Medicago truncatula clone mth2-74f16, complete sequence
          Length = 128458

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 32    aaacaaagttgttcaaaca 50
             |||||||||||||||||||
Sbjct: 64811 aaacaaagttgttcaaaca 64829
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>emb|AL137853.12| Human DNA sequence from clone RP4-562N20 on chromosome 1p21.3-23
             Contains part of the MACF1 gene for microtubule-actin
             crosslinking factor 1 and a CpG island, complete sequence
          Length = 113853

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 52    gcaaagaaagataagagtt 70
             |||||||||||||||||||
Sbjct: 26431 gcaaagaaagataagagtt 26413
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>gb|AC161185.5| Mus musculus chromosome 5, clone RP23-297D16, complete sequence
          Length = 206099

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 11    ttttattccttttttgatt 29
             |||||||||||||||||||
Sbjct: 57317 ttttattccttttttgatt 57299
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>emb|AL773510.5| Mouse DNA sequence from clone RP24-200F10 on chromosome 4 Contains a
             novel gene and a casein kinase II alpha 1 polypeptide
             (Csnk2a1) pseudogene, complete sequence
          Length = 134053

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 44    tcaaacaggcaaagaaaga 62
             |||||||||||||||||||
Sbjct: 56535 tcaaacaggcaaagaaaga 56553
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>emb|AJ296569.1|UBA296569 Uncultured bacterium GR-WP33-30 16S rRNA gene, clone GR-WP33-30
          Length = 1318

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 123  ccctagttgctaccattca 141
            |||||||||||||||||||
Sbjct: 1067 ccctagttgctaccattca 1085
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>gb|AC091155.5| Homo sapiens chromosome 17, clone CTD1-2306D4, complete sequence
          Length = 144430

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 86    tttacagtttcttcaccca 104
             |||||||||||||||||||
Sbjct: 19256 tttacagtttcttcaccca 19238
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>gb|AF407036.1| Plocepasser mahali tRNA-Met gene, partial sequence; NADH
           dehydrogenase subunit 2 (ND2) gene, complete cds; and
           tRNA-Trp gene, partial sequence; mitochondrial genes for
           mitochondrial products
          Length = 1088

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 98  tcacccacttgacccacccaaca 120
           ||||||| |||||||||||||||
Sbjct: 278 tcacccaattgacccacccaaca 300
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>gb|AC103864.2| Homo sapiens chromosome 8, clone RP11-192P9, complete sequence
          Length = 164867

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 54    aaagaaagataagagttgg 72
             |||||||||||||||||||
Sbjct: 16659 aaagaaagataagagttgg 16641
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>gb|AC093878.3| Homo sapiens BAC clone RP11-638O6 from 4, complete sequence
          Length = 176018

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 9     gcttttattccttttttga 27
             |||||||||||||||||||
Sbjct: 72961 gcttttattccttttttga 72979
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>gb|AC021818.9| Homo sapiens chromosome 15, clone RP11-19J5, complete sequence
          Length = 168639

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 150   ccgccaccaaggaccagct 168
             |||||||||||||||||||
Sbjct: 81830 ccgccaccaaggaccagct 81848
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>gb|AC079090.4| Homo sapiens chromosome 15, clone RP11-268O3, complete sequence
          Length = 158510

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 43   ttcaaacaggcaaagaaag 61
            |||||||||||||||||||
Sbjct: 2530 ttcaaacaggcaaagaaag 2512
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>gb|AF325335.1|F325326S10 Homo sapiens macrophin 1 isoforms (MACF1) gene, exons 51, 52, and 53
          Length = 5986

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 52   gcaaagaaagataagagtt 70
            |||||||||||||||||||
Sbjct: 4021 gcaaagaaagataagagtt 4003
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>ref|XM_680910.1| PREDICTED: Danio rerio similar to Mrpl47 protein (LOC557789), mRNA
          Length = 753

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 85  ttttacagtttcttcaccc 103
           |||||||||||||||||||
Sbjct: 255 ttttacagtttcttcaccc 237
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>gb|AE003738.3| Drosophila melanogaster chromosome 3R, section 76 of 118 of the complete
              sequence
          Length = 287397

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 10     cttttattccttttttgat 28
              |||||||||||||||||||
Sbjct: 166164 cttttattccttttttgat 166146
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>gb|AC019246.6|AC019246 Homo sapiens, clone RP11-2K18, complete sequence
          Length = 154984

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 54    aaagaaagataagagttgg 72
             |||||||||||||||||||
Sbjct: 28870 aaagaaagataagagttgg 28852
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>gb|AC121324.5| Homo sapiens chromosome 15, clone RP11-959E3, complete sequence
          Length = 192087

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 43    ttcaaacaggcaaagaaag 61
             |||||||||||||||||||
Sbjct: 79999 ttcaaacaggcaaagaaag 79981
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>gb|AC009915.5|AC009915 Drosophila melanogaster, chromosome 3R, region 94A-94A, BAC clone
             BACR09L14, complete sequence
          Length = 167368

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 10    cttttattccttttttgat 28
             |||||||||||||||||||
Sbjct: 75984 cttttattccttttttgat 75966
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>gb|AC150255.7| Aedes aegypti, clone XX-85K2, complete sequence
          Length = 164368

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 23    tttgattcgaaacaaagtt 41
             |||||||||||||||||||
Sbjct: 53597 tttgattcgaaacaaagtt 53579
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>gb|AC007496.6| Homo sapiens chromosome 16 clone RP11-357N13, complete sequence
          Length = 198417

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 11     ttttattccttttttgatt 29
              |||||||||||||||||||
Sbjct: 139880 ttttattccttttttgatt 139862
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>gb|AC124091.16| Homo sapiens chromosome 15, clone RP11-640H21, complete sequence
          Length = 196827

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 43     ttcaaacaggcaaagaaag 61
              |||||||||||||||||||
Sbjct: 128818 ttcaaacaggcaaagaaag 128800
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>gb|AE016830.1| Enterococcus faecalis V583, complete genome
          Length = 3218031

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 78     cttcaggttttacagtttcttca 100
              ||||||||||||||||| |||||
Sbjct: 669542 cttcaggttttacagttacttca 669520
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>emb|CR388150.14| Zebrafish DNA sequence from clone DKEY-115A2 in linkage group 3, complete
              sequence
          Length = 170964

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 95     tcttcacccacttgaccca 113
              |||||||||||||||||||
Sbjct: 165206 tcttcacccacttgaccca 165188
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>gb|AC163697.3| Gallus gallus BAC clone CH261-186A14 from chromosome unknown, complete
             sequence
          Length = 224517

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 48    acaggcaaagaaagataag 66
             |||||||||||||||||||
Sbjct: 20124 acaggcaaagaaagataag 20142
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>gb|AC159009.2| Gallus gallus BAC clone CH261-189M12 from chromosome unknown, complete
              sequence
          Length = 211745

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 48     acaggcaaagaaagataag 66
              |||||||||||||||||||
Sbjct: 105010 acaggcaaagaaagataag 105028
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>gb|AC154248.2| Mus musculus BAC clone RP24-182I14 from chromosome 13, complete sequence
          Length = 188542

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 47     aacaggcaaagaaagataagagt 69
              ||||||||||| |||||||||||
Sbjct: 174218 aacaggcaaaggaagataagagt 174196
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>emb|AL928701.7| Zebrafish DNA sequence from clone CH211-201H21, complete sequence
          Length = 188745

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 85     ttttacagtttcttcaccc 103
              |||||||||||||||||||
Sbjct: 156185 ttttacagtttcttcaccc 156203
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>emb|AL731701.8| Mouse DNA sequence from clone RP23-140L6 on chromosome X, complete
             sequence
          Length = 128198

 Score = 38.2 bits (19), Expect = 9.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 79    ttcaggttttacagtttct 97
             |||||||||||||||||||
Sbjct: 58608 ttcaggttttacagtttct 58626


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,880,255
Number of Sequences: 3902068
Number of extensions: 1880255
Number of successful extensions: 151071
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 150800
Number of HSP's gapped (non-prelim): 271
length of query: 189
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 167
effective length of database: 17,147,199,772
effective search space: 2863582361924
effective search space used: 2863582361924
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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