ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl12e06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL112793.1|CNS01ADD Botrytis cinerea strain T4 cDNA library 44 0.27
2ref|XM_516621.1| PREDICTED: Pan troglodytes similar to GPBP-inte... 42 1.1
3ref|NM_182909.1| Homo sapiens downregulated in ovarian cancer 1 ... 42 1.1
4ref|NM_014890.1| Homo sapiens downregulated in ovarian cancer 1 ... 42 1.1
5gb|AC183598.2| Pan troglodytes BAC clone CH251-455P14 from chrom... 42 1.1
6gb|AC183838.2| Pan troglodytes BAC clone CH251-11K10 from chromo... 42 1.1
7gb|AC005011.2| Homo sapiens BAC clone GS1-111G14 from 7, complet... 42 1.1
8emb|CR759954.9| Human DNA sequence from clone DAAP-101P24 on chr... 42 1.1
9emb|CR936879.6| Human DNA sequence from clone DAMC-338N21 on chr... 42 1.1
10emb|CR753651.10| Human DNA sequence from clone DADB-91F17 on chr... 42 1.1
11gb|BC027860.1| Homo sapiens downregulated in ovarian cancer 1, m... 42 1.1
12emb|Z84474.1|HS111M5 Human DNA sequence from clone RP1-111M5 on ... 42 1.1
13emb|BX470194.8| Human DNA sequence from clone DASS-263B11 on chr... 42 1.1
14emb|AL844539.5| Human DNA sequence from clone DAQB-239N17 on chr... 42 1.1
15emb|AL669978.3| Human DNA sequence from clone XXbac-57P4 on chro... 42 1.1
16emb|AL662890.3| Human DNA sequence from clone XXbac-308K3 on chr... 42 1.1
17emb|CR613746.1| full-length cDNA clone CS0DI081YJ18 of Placenta ... 42 1.1
18dbj|AK096195.1| Homo sapiens cDNA FLJ38876 fis, clone MESAN20141... 42 1.1
19gb|AC069222.23| Homo sapiens 3 BAC RP11-383I23 (Roswell Park Can... 42 1.1
20dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
21emb|BX908720.10| Human DNA sequence from clone DAMA-184I15 on ch... 42 1.1
22dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
23dbj|AP005192.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
24emb|AJ427982.1|OSA427982 Oryza sativa partial HAK13 gene for put... 42 1.1
25gb|AY642382.1| Homo sapiens GPBP-interacting protein 130d mRNA, ... 42 1.1
26gb|AF514869.1| Homo sapiens GPBP-interacting protein 130c mRNA, ... 42 1.1
27gb|AF514868.1| Homo sapiens GPBP-interacting protein 130b mRNA, ... 42 1.1
28gb|AF514867.1| Homo sapiens GPBP-interacting protein 130a mRNA, ... 42 1.1
29gb|AF329092.1| Homo sapiens GPBP-interacting protein 90 mRNA, co... 42 1.1
30gb|U53445.1|HSU53445 Human ovarian cancer downregulated myosin h... 42 1.1
31gb|AC152981.2| Mus musculus 10 BAC RP23-154M15 (Roswell Park Can... 42 1.1
32emb|CT025158.5| Mouse DNA sequence from clone RP23-178N11 on chr... 40 4.2
33ref|XM_950272.1| Theileria annulata strain Ankara DEAD/DEAH-like... 40 4.2
34emb|AL646046.8| Mouse DNA sequence from clone RP23-101M12 on chr... 40 4.2
35gb|AC127034.2| Homo sapiens chromosome 8, clone CTD-2303L17, com... 40 4.2
36gb|DQ248886.1| Haemaphysalis longicornis follistatin-related pro... 40 4.2
37gb|AC153852.9| Mus musculus 10 BAC RP23-136F8 (Roswell Park Canc... 40 4.2
38gb|AC027701.9| Homo sapiens chromosome 8, clone RP11-99H20, comp... 40 4.2
39gb|AC091901.3| Homo sapiens chromosome 5 clone RP11-167P20, comp... 40 4.2
40gb|AC007318.4| Homo sapiens BAC clone RP11-420C9 from 2, complet... 40 4.2
41gb|AC084278.6| Homo sapiens BAC clone RP11-350H15 from 2, comple... 40 4.2
42dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
43gb|AC118202.8| Mus musculus chromosome 10, clone RP23-378J3, com... 40 4.2 
>emb|AL112793.1|CNS01ADD Botrytis cinerea strain T4 cDNA library
          Length = 1920

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 89   cacaaaccacaatacaacatat 110
            ||||||||||||||||||||||
Sbjct: 1133 cacaaaccacaatacaacatat 1112
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>ref|XM_516621.1| PREDICTED: Pan troglodytes similar to GPBP-interacting protein B
            (LOC460551), mRNA
          Length = 4874

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 247  gaaagactgaaactgaagcta 267
            |||||||||||||||||||||
Sbjct: 2403 gaaagactgaaactgaagcta 2423
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>ref|NM_182909.1| Homo sapiens downregulated in ovarian cancer 1 (DOC1), transcript
            variant 1, mRNA
          Length = 3998

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 247  gaaagactgaaactgaagcta 267
            |||||||||||||||||||||
Sbjct: 2369 gaaagactgaaactgaagcta 2389
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>ref|NM_014890.1| Homo sapiens downregulated in ovarian cancer 1 (DOC1), transcript
            variant 2, mRNA
          Length = 3025

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 247  gaaagactgaaactgaagcta 267
            |||||||||||||||||||||
Sbjct: 1269 gaaagactgaaactgaagcta 1289
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>gb|AC183598.2| Pan troglodytes BAC clone CH251-455P14 from chromosome 7, complete
             sequence
          Length = 216847

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 167   aatgctcaaatgacaacagta 187
             |||||||||||||||||||||
Sbjct: 19805 aatgctcaaatgacaacagta 19785
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>gb|AC183838.2| Pan troglodytes BAC clone CH251-11K10 from chromosome 7, complete
              sequence
          Length = 153555

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 167    aatgctcaaatgacaacagta 187
              |||||||||||||||||||||
Sbjct: 110361 aatgctcaaatgacaacagta 110341
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>gb|AC005011.2| Homo sapiens BAC clone GS1-111G14 from 7, complete sequence
          Length = 166069

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 167   aatgctcaaatgacaacagta 187
             |||||||||||||||||||||
Sbjct: 42827 aatgctcaaatgacaacagta 42807
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>emb|CR759954.9| Human DNA sequence from clone DAAP-101P24 on chromosome 6, complete
             sequence
          Length = 94061

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 185   gtatccaggaaagaacaaaaa 205
             |||||||||||||||||||||
Sbjct: 46673 gtatccaggaaagaacaaaaa 46653
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>emb|CR936879.6| Human DNA sequence from clone DAMC-338N21 on chromosome 6, complete
            sequence
          Length = 44479

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 185  gtatccaggaaagaacaaaaa 205
            |||||||||||||||||||||
Sbjct: 2334 gtatccaggaaagaacaaaaa 2314
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>emb|CR753651.10| Human DNA sequence from clone DADB-91F17 on chromosome 6, complete
             sequence
          Length = 124464

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 185   gtatccaggaaagaacaaaaa 205
             |||||||||||||||||||||
Sbjct: 79420 gtatccaggaaagaacaaaaa 79400
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>gb|BC027860.1| Homo sapiens downregulated in ovarian cancer 1, mRNA (cDNA clone
            MGC:34368 IMAGE:5228947), complete cds
          Length = 3229

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 247  gaaagactgaaactgaagcta 267
            |||||||||||||||||||||
Sbjct: 1355 gaaagactgaaactgaagcta 1375
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>emb|Z84474.1|HS111M5 Human DNA sequence from clone RP1-111M5 on chromosome 6p21.3 Contains
             an RPL13 (60S Ribosomal protein L13, BBC1) pseudogene, a
             zinc finger protein pseudogene, the 3' end of the RFP gene
             for ret finger protein, four CpG islands, ESTs, STSs and
             GSSs, complete sequence
          Length = 107526

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 185   gtatccaggaaagaacaaaaa 205
             |||||||||||||||||||||
Sbjct: 13959 gtatccaggaaagaacaaaaa 13939
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>emb|BX470194.8| Human DNA sequence from clone DASS-263B11 on chromosome 6, complete
             sequence
          Length = 43833

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 185   gtatccaggaaagaacaaaaa 205
             |||||||||||||||||||||
Sbjct: 32183 gtatccaggaaagaacaaaaa 32163
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>emb|AL844539.5| Human DNA sequence from clone DAQB-239N17 on chromosome 6 Contains the
             NOL5BP pseudogene for nucleolar protein 5B, the RPL13P
             pseudogene for ribosomal protein L13 and 3 CpG islands,
             complete sequence
          Length = 98145

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 185   gtatccaggaaagaacaaaaa 205
             |||||||||||||||||||||
Sbjct: 46950 gtatccaggaaagaacaaaaa 46930
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>emb|AL669978.3| Human DNA sequence from clone XXbac-57P4 on chromosome 6 contains a
             ribosomal protein L13 (RPL13) pseudogene and three CpG
             islands, complete sequence
          Length = 63505

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 185   gtatccaggaaagaacaaaaa 205
             |||||||||||||||||||||
Sbjct: 17236 gtatccaggaaagaacaaaaa 17216
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>emb|AL662890.3| Human DNA sequence from clone XXbac-308K3 on chromosome 6 Contains a
             laminin receptor 1 (ribosomal protein SA, 67kDa) (LAMR1)
             pseudogene, a pseudogene similar to part of nucleolar
             protein 5A NOL5A, a ribosomal protein L13 (RPL13)(BBC1)
             pseudogene and two CpG islands, complete sequence
          Length = 137288

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 185   gtatccaggaaagaacaaaaa 205
             |||||||||||||||||||||
Sbjct: 93002 gtatccaggaaagaacaaaaa 92982
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>emb|CR613746.1| full-length cDNA clone CS0DI081YJ18 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1685

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 247 gaaagactgaaactgaagcta 267
           |||||||||||||||||||||
Sbjct: 124 gaaagactgaaactgaagcta 144
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>dbj|AK096195.1| Homo sapiens cDNA FLJ38876 fis, clone MESAN2014192, highly similar to
            Human ovarian cancer downregulated myosin heavy chain
            homolog (Doc1) mRNA
          Length = 3069

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 247  gaaagactgaaactgaagcta 267
            |||||||||||||||||||||
Sbjct: 1219 gaaagactgaaactgaagcta 1239
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>gb|AC069222.23| Homo sapiens 3 BAC RP11-383I23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 117000

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 247   gaaagactgaaactgaagcta 267
             |||||||||||||||||||||
Sbjct: 18051 gaaagactgaaactgaagcta 18071
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 244      tctgaaagactgaaactgaag 264
                |||||||||||||||||||||
Sbjct: 27438169 tctgaaagactgaaactgaag 27438189



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 244     tctgaaagactgaaactgaa 263
               ||||||||||||||||||||
Sbjct: 4253373 tctgaaagactgaaactgaa 4253354
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>emb|BX908720.10| Human DNA sequence from clone DAMA-184I15 on chromosome 6, complete
             sequence
          Length = 132528

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 185   gtatccaggaaagaacaaaaa 205
             |||||||||||||||||||||
Sbjct: 79685 gtatccaggaaagaacaaaaa 79665
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>dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBa0032M14
          Length = 146636

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 244  tctgaaagactgaaactgaag 264
            |||||||||||||||||||||
Sbjct: 7727 tctgaaagactgaaactgaag 7747
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>dbj|AP005192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0485A07
          Length = 166397

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 244   tctgaaagactgaaactgaag 264
             |||||||||||||||||||||
Sbjct: 57238 tctgaaagactgaaactgaag 57258
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>emb|AJ427982.1|OSA427982 Oryza sativa partial HAK13 gene for putative potasium transporter
          Length = 5989

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 244 tctgaaagactgaaactgaag 264
           |||||||||||||||||||||
Sbjct: 795 tctgaaagactgaaactgaag 815
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>gb|AY642382.1| Homo sapiens GPBP-interacting protein 130d mRNA, complete cds
          Length = 3436

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 247  gaaagactgaaactgaagcta 267
            |||||||||||||||||||||
Sbjct: 1912 gaaagactgaaactgaagcta 1932
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>gb|AF514869.1| Homo sapiens GPBP-interacting protein 130c mRNA, complete cds
          Length = 3402

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 247  gaaagactgaaactgaagcta 267
            |||||||||||||||||||||
Sbjct: 1897 gaaagactgaaactgaagcta 1917
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>gb|AF514868.1| Homo sapiens GPBP-interacting protein 130b mRNA, complete cds
          Length = 3402

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 247  gaaagactgaaactgaagcta 267
            |||||||||||||||||||||
Sbjct: 1897 gaaagactgaaactgaagcta 1917
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>gb|AF514867.1| Homo sapiens GPBP-interacting protein 130a mRNA, complete cds
          Length = 3408

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 247  gaaagactgaaactgaagcta 267
            |||||||||||||||||||||
Sbjct: 1897 gaaagactgaaactgaagcta 1917
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>gb|AF329092.1| Homo sapiens GPBP-interacting protein 90 mRNA, complete cds
          Length = 3998

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 247  gaaagactgaaactgaagcta 267
            |||||||||||||||||||||
Sbjct: 2369 gaaagactgaaactgaagcta 2389
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>gb|U53445.1|HSU53445 Human ovarian cancer downregulated myosin heavy chain homolog (Doc1)
            mRNA, complete cds
          Length = 3025

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 247  gaaagactgaaactgaagcta 267
            |||||||||||||||||||||
Sbjct: 1269 gaaagactgaaactgaagcta 1289
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>gb|AC152981.2| Mus musculus 10 BAC RP23-154M15 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 200104

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 42     agtacattcaagatcattact 62
              |||||||||||||||||||||
Sbjct: 116263 agtacattcaagatcattact 116243
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>emb|CT025158.5| Mouse DNA sequence from clone RP23-178N11 on chromosome 16, complete
              sequence
          Length = 194555

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    aattccttaattcatcttga 135
              ||||||||||||||||||||
Sbjct: 174717 aattccttaattcatcttga 174698
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>ref|XM_950272.1| Theileria annulata strain Ankara DEAD/DEAH-like helicase (TA17645)
            partial mRNA
          Length = 6486

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 123  taattcatcttgattgggaa 142
            ||||||||||||||||||||
Sbjct: 1697 taattcatcttgattgggaa 1678
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>emb|AL646046.8| Mouse DNA sequence from clone RP23-101M12 on chromosome 11, complete
            sequence
          Length = 214665

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 86   atccacaaaccacaatacaa 105
            ||||||||||||||||||||
Sbjct: 5589 atccacaaaccacaatacaa 5608
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>gb|AC127034.2| Homo sapiens chromosome 8, clone CTD-2303L17, complete sequence
          Length = 102534

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   acaacatattgtacaattcc 121
             ||||||||||||||||||||
Sbjct: 90108 acaacatattgtacaattcc 90127
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>gb|DQ248886.1| Haemaphysalis longicornis follistatin-related protein (FRP) mRNA,
            complete cds
          Length = 1157

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 161  tgtactaatgctcaaatgacaaca 184
            ||||| ||||||||||||||||||
Sbjct: 1091 tgtacaaatgctcaaatgacaaca 1068
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>gb|AC153852.9| Mus musculus 10 BAC RP23-136F8 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 222518

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 184    agtatccaggaaagaacaaa 203
              ||||||||||||||||||||
Sbjct: 106943 agtatccaggaaagaacaaa 106924
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>gb|AC027701.9| Homo sapiens chromosome 8, clone RP11-99H20, complete sequence
          Length = 135346

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   acaacatattgtacaattcc 121
             ||||||||||||||||||||
Sbjct: 69255 acaacatattgtacaattcc 69236
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>gb|AC091901.3| Homo sapiens chromosome 5 clone RP11-167P20, complete sequence
          Length = 176633

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   tcttgattgggaattgacag 149
             ||||||||||||||||||||
Sbjct: 79660 tcttgattgggaattgacag 79679
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>gb|AC007318.4| Homo sapiens BAC clone RP11-420C9 from 2, complete sequence
          Length = 204230

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 198 aacaaaaaggggcatgtgctaggtttgcacac 229
           ||||||||||||| || ||| |||||||||||
Sbjct: 186 aacaaaaaggggcttgagcttggtttgcacac 155
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>gb|AC084278.6| Homo sapiens BAC clone RP11-350H15 from 2, complete sequence
          Length = 3994

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 198  aacaaaaaggggcatgtgctaggtttgcacac 229
            ||||||||||||| || ||| |||||||||||
Sbjct: 2180 aacaaaaaggggcttgagcttggtttgcacac 2149
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>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0554A06
          Length = 165311

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 244   tctgaaagactgaaactgaa 263
             ||||||||||||||||||||
Sbjct: 98594 tctgaaagactgaaactgaa 98575
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>gb|AC118202.8| Mus musculus chromosome 10, clone RP23-378J3, complete sequence
          Length = 213862

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   agtatccaggaaagaacaaa 203
             ||||||||||||||||||||
Sbjct: 31947 agtatccaggaaagaacaaa 31928


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,173,289
Number of Sequences: 3902068
Number of extensions: 3173289
Number of successful extensions: 59874
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59774
Number of HSP's gapped (non-prelim): 100
length of query: 316
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 294
effective length of database: 17,147,199,772
effective search space: 5041276732968
effective search space used: 5041276732968
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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