Clone Name | rbastl12d11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | dbj|AK015671.1| Mus musculus adult male testis cDNA, RIKEN full-... | 40 | 4.1 | 2 | gb|AY109011.1| Zea mays PCO078615 mRNA sequence | 40 | 4.1 | 3 | gb|AC132574.3| Mus musculus BAC clone RP24-421H8 from 1, complet... | 40 | 4.1 |
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>dbj|AK015671.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930500N06 product:hypothetical protein, full insert sequence Length = 847 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 104 acacgtccttaatacagagacaaaacct 131 ||||||| ||||||||||||||||||| Sbjct: 219 acacgtcgataatacagagacaaaacct 246
>gb|AY109011.1| Zea mays PCO078615 mRNA sequence Length = 1368 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 tgcattccatatcaaagcaa 191 |||||||||||||||||||| Sbjct: 548 tgcattccatatcaaagcaa 529
>gb|AC132574.3| Mus musculus BAC clone RP24-421H8 from 1, complete sequence Length = 173036 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 caaacttcagctccacctgc 253 |||||||||||||||||||| Sbjct: 126753 caaacttcagctccacctgc 126772 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,917,305 Number of Sequences: 3902068 Number of extensions: 1917305 Number of successful extensions: 32208 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 32205 Number of HSP's gapped (non-prelim): 3 length of query: 311 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 289 effective length of database: 17,147,199,772 effective search space: 4955540734108 effective search space used: 4955540734108 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)