>emb|AL954241.1| Pan troglodytes chromosome 22 clone RP43-181I17 map 22q22.2-q22.3,
             complete sequence
          Length = 212865

 Score = 42.1 bits (21), Expect = 0.36
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 98    gaagctacaaaaatatagcaa 118
             |||||||||||||||||||||
Sbjct: 27917 gaagctacaaaaatatagcaa 27897

>emb|AL954240.1| Pan troglodytes chromosome 22 clone PTB-045O21 map 22q22.2-q22.3,
              complete sequence
          Length = 164591

 Score = 42.1 bits (21), Expect = 0.36
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 98     gaagctacaaaaatatagcaa 118
              |||||||||||||||||||||
Sbjct: 111168 gaagctacaaaaatatagcaa 111148

>gb|AC022568.7| Homo sapiens chromosome 8, clone RP11-10H3, complete sequence
          Length = 138073

 Score = 42.1 bits (21), Expect = 0.36
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 84    tatgacagataacagaagcta 104
             |||||||||||||||||||||
Sbjct: 29065 tatgacagataacagaagcta 29045

>gb|AC139170.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0058P12, complete sequence
          Length = 173073

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 97    agaagctacaaaaatatagcaaac 120
             |||||||||||||| |||||||||
Sbjct: 52479 agaagctacaaaaaaatagcaaac 52456

>gb|BC092206.1| Rattus norvegicus vesicle-associated membrane protein 1, mRNA (cDNA
            clone MGC:105480 IMAGE:7313343), complete cds
          Length = 2554

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 86   tgacagataacagaagctacaaaa 109
            ||||||||||||| ||||||||||
Sbjct: 1060 tgacagataacagtagctacaaaa 1037

>ref|NM_013090.2| Rattus norvegicus vesicle-associated membrane protein 1 (Vamp1), mRNA
          Length = 2650

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 86   tgacagataacagaagctacaaaa 109
            ||||||||||||| ||||||||||
Sbjct: 1162 tgacagataacagtagctacaaaa 1139

>emb|AJ426040.1|TRU426040 Takifugu rubripes vader gene, cetn gene, fgf2 gene, gfg gene and spaf
             gene, cosmid 196n09
          Length = 29053

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 92    ataacagaagctacaaaaatatag 115
             ||||||| ||||||||||||||||
Sbjct: 21269 ataacagtagctacaaaaatatag 21246

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 97      agaagctacaaaaatatagcaaac 120
               |||||||||||||| |||||||||
Sbjct: 4942414 agaagctacaaaaaaatagcaaac 4942437

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 97      agaagctacaaaaatatagcaaac 120
               |||||||||||||| |||||||||
Sbjct: 4961198 agaagctacaaaaaaatagcaaac 4961221

>gb|M24104.1|RATVAMPIR Rat vesicle associated membrane protein (VAMP-1) mRNA, complete cds
          Length = 1482

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 86   tgacagataacagaagctacaaaa 109
            ||||||||||||| ||||||||||
Sbjct: 1064 tgacagataacagtagctacaaaa 1041

>ref|NM_001036793.1| Arabidopsis thaliana MYB3R-4; DNA binding / transcription factor
            AT5G11510 (MYB3R-4) transcript variant AT5G11510.2 mRNA,
            complete cds
          Length = 2397

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 87   gacagataacagaagctacaaaa 109
            |||||||| ||||||||||||||
Sbjct: 1262 gacagatatcagaagctacaaaa 1284

>ref|NM_121189.2| Arabidopsis thaliana MYB3R-4; DNA binding / transcription factor
            AT5G11510 (MYB3R-4) transcript variant AT5G11510.1 mRNA,
            complete cds
          Length = 3403

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 87   gacagataacagaagctacaaaa 109
            |||||||| ||||||||||||||
Sbjct: 1589 gacagatatcagaagctacaaaa 1611

>gb|AC104203.11| Mus musculus chromosome 5, clone RP24-301M6, complete sequence
          Length = 174779

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 95     acagaagctacaaaaatat 113
              |||||||||||||||||||
Sbjct: 113480 acagaagctacaaaaatat 113498

>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11,
             complete sequence
          Length = 204649

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 100   agctacaaaaatatagcaa 118
             |||||||||||||||||||
Sbjct: 90863 agctacaaaaatatagcaa 90845

>gb|AY185488.1| HIV-1 isolate HRLUX38 from Luxembourg envelope glycoprotein (env)
          gene, partial cds
          Length = 435

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 42 tacaagccagacagctatt 60
          |||||||||||||||||||
Sbjct: 23 tacaagccagacagctatt 41

>gb|AY519650.1| Arabidopsis thaliana MYB transcription factor (At5g11510) mRNA,
            complete cds
          Length = 2886

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 87   gacagataacagaagctacaaaa 109
            |||||||| ||||||||||||||
Sbjct: 1262 gacagatatcagaagctacaaaa 1284

>emb|AL390736.6| Human DNA sequence from clone RP11-209J19 on chromosome 13 Contains a
              novel gene, complete sequence
          Length = 125681

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 95     acagaagctacaaaaatat 113
              |||||||||||||||||||
Sbjct: 123321 acagaagctacaaaaatat 123303

>gb|AC092981.3| Homo sapiens 3 BAC RP11-305I9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 160000

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 102   ctacaaaaatatagcaaac 120
             |||||||||||||||||||
Sbjct: 35280 ctacaaaaatatagcaaac 35298

>emb|AL163815.1|ATF15N18 Arabidopsis thaliana DNA chromosome 5, BAC clone F15N18 (ESSA project)
          Length = 101665

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 87    gacagataacagaagctacaaaa 109
             |||||||| ||||||||||||||
Sbjct: 44304 gacagatatcagaagctacaaaa 44326

>gb|AC010043.7| Drosophila melanogaster 3L BAC RP98-12K4 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 184657

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 99     aagctacaaaaatatagca 117
              |||||||||||||||||||
Sbjct: 105376 aagctacaaaaatatagca 105394

>gb|AC024649.10| Homo sapiens chromosome 8, clone RP11-618N15, complete sequence
          Length = 148282

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 97     agaagctacaaaaatatag 115
              |||||||||||||||||||
Sbjct: 138224 agaagctacaaaaatatag 138206

>gb|AC104995.4| Homo sapiens chromosome 8, clone RP11-1130I3, complete sequence
          Length = 159240

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 97    agaagctacaaaaatatag 115
             |||||||||||||||||||
Sbjct: 54521 agaagctacaaaaatatag 54503

>gb|AC182460.2| Gallus gallus BAC clone CH261-132N3 from chromosome ul, complete sequence
          Length = 212965

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 68     acttttgggtaagatttatgaca 90
              |||| ||||||||||||||||||
Sbjct: 117838 acttgtgggtaagatttatgaca 117816

>gb|AC177806.2| Gallus gallus BAC clone CH261-13L12 from chromosome ul, complete
             sequence
          Length = 250495

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 68    acttttgggtaagatttatgaca 90
             |||| ||||||||||||||||||
Sbjct: 47059 acttgtgggtaagatttatgaca 47037

>gb|AF371975.2|AF371975 Arabidopsis thaliana putative c-myb-like transcription factor MYB3R-4
            (MYB3R4) mRNA, complete cds
          Length = 3434

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 87   gacagataacagaagctacaaaa 109
            |||||||| ||||||||||||||
Sbjct: 1589 gacagatatcagaagctacaaaa 1611

>gb|AC008514.8| Homo sapiens chromosome 5 clone CTC-455F18, complete sequence
          Length = 172525

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 92    ataacagaagctacaaaaa 110
             |||||||||||||||||||
Sbjct: 75098 ataacagaagctacaaaaa 75116

>gb|AC091635.1|AC091635 Drosophila melanogaster, chromosome 2R, region 56F-57A, BAC clone
              BACR10H12, complete sequence
          Length = 166168

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 102    ctacaaaaatatagcaaac 120
              |||||||||||||||||||
Sbjct: 160460 ctacaaaaatatagcaaac 160478

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 100      agctacaaaaatatagcaa 118
                |||||||||||||||||||
Sbjct: 28010698 agctacaaaaatatagcaa 28010680

>gb|AC008347.2|AC008347 Drosophila melanogaster, chromosome 2R, region 57A-57A, BAC clone
             BACR03N16, complete sequence
          Length = 165519

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 102   ctacaaaaatatagcaaac 120
             |||||||||||||||||||
Sbjct: 53796 ctacaaaaatatagcaaac 53814

>dbj|AB024034.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MDC11
          Length = 86233

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 92   ataacagaagctacaaaaa 110
            |||||||||||||||||||
Sbjct: 5438 ataacagaagctacaaaaa 5456

>gb|AC102466.11| Mus musculus chromosome 3, clone RP24-337A2, complete sequence
          Length = 164455

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 93    taacagaagctacaaaaat 111
             |||||||||||||||||||
Sbjct: 25068 taacagaagctacaaaaat 25050

>gb|AE003792.3| Drosophila melanogaster chromosome 2R, section 58 of 73 of the complete
              sequence
          Length = 256764

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 102    ctacaaaaatatagcaaac 120
              |||||||||||||||||||
Sbjct: 215389 ctacaaaaatatagcaaac 215407

>gb|AE003551.3| Drosophila melanogaster chromosome 3L, section 34 of 83 of the complete
              sequence
          Length = 285860

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 99     aagctacaaaaatatagca 117
              |||||||||||||||||||
Sbjct: 105175 aagctacaaaaatatagca 105193

>dbj|D32165.1|RICAP Rice gene for aspartic protease, complete cds
          Length = 6782

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 100 agctacaaaaatatagcaa 118
           |||||||||||||||||||
Sbjct: 207 agctacaaaaatatagcaa 189


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,206,797
Number of Sequences: 3902068
Number of extensions: 1206797
Number of successful extensions: 86278
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86121
Number of HSP's gapped (non-prelim): 157
length of query: 121
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 100
effective length of database: 17,151,101,840
effective search space: 1715110184000
effective search space used: 1715110184000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)