ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl12d08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RIC1_YEAST (P40395) Protein RIC1 28 5.9

>RIC1_YEAST (P40395) Protein RIC1|
          Length = 1056

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 9/64 (14%)
 Frame = -1

Query: 223 KETSNTIYKKKGKLEMLV---------WKFLQFLAWALCSPEM*KVQIQPVAWG*KEGTK 71
           K T   +YKKKGK+ +L+         WK      W +  P++ ++  +    G  EGTK
Sbjct: 8   KNTPKCLYKKKGKVRVLLTGSCKKLNTWK---MHLWPVSPPQLLRIPPRNAELG--EGTK 62

Query: 70  ILVC 59
           I  C
Sbjct: 63  IDDC 66


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,247,123
Number of Sequences: 219361
Number of extensions: 879108
Number of successful extensions: 2073
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2073
length of database: 80,573,946
effective HSP length: 74
effective length of database: 64,341,232
effective search space used: 1544189568
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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