Clone Name | rbastl12d04 |
---|---|
Clone Library Name | barley_pub |
>ZN363_HUMAN (Q96PM5) RING finger and CHY zinc finger domain-containing protein| 1 (Zinc finger protein 363) (CH-rich-interacting match with PLAG1) (Androgen receptor N-terminal-interacting protein) Length = 261 Score = 29.3 bits (64), Expect = 2.6 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Frame = -3 Query: 267 KRQMHCAAVGSCMCFSAFHSFFCLD-NICCKMNVMLYCKSIGRATARRVVPVLQENLTCG 91 K+Q HC G C F CL N+C MN+ K I +R+ P+ E++ Sbjct: 97 KKQYHCENCGICRIGPKEDFFHCLKCNLCLAMNLQGRHKCI-ENVSRQNCPICLEDIHTS 155 Query: 90 IVIA 79 V+A Sbjct: 156 RVVA 159
>ZN363_MOUSE (Q9CR50) RING finger and CHY zinc finger domain-containing protein| 1 (Zinc finger protein 363) (CH-rich-interacting match with PLAG1) (Androgen receptor N-terminal-interacting protein) Length = 261 Score = 28.9 bits (63), Expect = 3.4 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Frame = -3 Query: 267 KRQMHCAAVGSCMCFSAFHSFFCLD-NICCKMNVMLYCKSIGRATARRVVPVLQENLTCG 91 KRQ HC + G C F CL N+C N+ K I +R+ P+ E++ Sbjct: 97 KRQYHCESCGICRIGPKEDFFHCLKCNLCLTTNLRGKHKCI-ENVSRQNCPICLEDIHTS 155 Query: 90 IVIA 79 V+A Sbjct: 156 RVVA 159
>VG12_SHV21 (P24915) Hypothetical gene 12 protein| Length = 169 Score = 28.5 bits (62), Expect = 4.4 Identities = 16/59 (27%), Positives = 26/59 (44%) Frame = -3 Query: 282 SC*C*KRQMHCAAVGSCMCFSAFHSFFCLDNICCKMNVMLYCKSIGRATARRVVPVLQE 106 +C C R H CF + H FC K +M+ C S+ + ++ PVL++ Sbjct: 22 ACDCPSRVHHTCLQSHIQCFKSSHCTFCEK----KYKIMVMCNSLKKCSS----PVLEQ 72
>V55B_HHV7J (P52518) Hypothetical protein U55B| Length = 430 Score = 28.1 bits (61), Expect = 5.8 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 8/82 (9%) Frame = +3 Query: 96 K*GFPEELVPPCVLWLYLSTYSTALHSFYNKCCPSKRKNERPKNTYMIL------QLHNA 257 K GF E++P + S +H Y K C KRK + M+ +LH Sbjct: 243 KLGFVNEIIP--------NEISLTVHMHYFKICSDKRKIDVFFQDTMLFDEGETKKLHFK 294 Query: 258 FAFFSINKNHVLI--PRAEIQS 317 F++ N N + + P +++QS Sbjct: 295 GTFYNFNANALYVPDPNSKVQS 316
>V082_ASFB7 (P18557) V82 protein precursor| Length = 82 Score = 28.1 bits (61), Expect = 5.8 Identities = 14/44 (31%), Positives = 21/44 (47%) Frame = +1 Query: 19 CETIQLLFFCWDIMNSMILDCYNNTTSEVFLKNWYHPACCGSTY 150 C ++ FCWD N + ++ NTT L+N Y C S + Sbjct: 39 CTYMECCQFCWDCQNGLCVNKLGNTT---ILENEYVHPCIVSRW 79
>MTR1A_CHICK (P49285) Melatonin receptor type 1A (MEL-1A-R) (CKA)| Length = 353 Score = 27.7 bits (60), Expect = 7.6 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 5/64 (7%) Frame = +3 Query: 108 PEELVPPCVLWLYLSTYSTALHSFYNKCCPS-----KRKNERPKNTYMILQLHNAFAFFS 272 PE ++P WL++S+Y A ++N C + +N R + +++ A AFF Sbjct: 268 PETIIPRIPEWLFVSSYYMA---YFNSCLNAIIYGLLNQNFRREYKKIVVSFCTAKAFFQ 324 Query: 273 INKN 284 + N Sbjct: 325 DSSN 328
>SYR_BUCBP (P59483) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA| ligase) (ArgRS) Length = 578 Score = 27.7 bits (60), Expect = 7.6 Identities = 14/44 (31%), Positives = 20/44 (45%) Frame = +3 Query: 126 PCVLWLYLSTYSTALHSFYNKCCPSKRKNERPKNTYMILQLHNA 257 P ++ YL S FY KC K KN + + ++L L A Sbjct: 517 PHIICKYLYELSKIFSKFYEKCSIYKSKNTKIRKNRLLLSLLTA 560
>SYR_WIGBR (Q8D372) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA| ligase) (ArgRS) Length = 576 Score = 27.3 bits (59), Expect = 9.9 Identities = 15/45 (33%), Positives = 20/45 (44%) Frame = +3 Query: 114 ELVPPCVLWLYLSTYSTALHSFYNKCCPSKRKNERPKNTYMILQL 248 +L P +L YL S FY C K K E KN+ + L + Sbjct: 511 KLGTPHILCNYLYDLSKTFSVFYENCSIIKTKEESVKNSRLFLSI 555
>VATA_ARATH (O23654) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)| (V-ATPase subunit A) (Vacuolar proton pump alpha subunit) (V-ATPase 69 kDa subunit) Length = 623 Score = 27.3 bits (59), Expect = 9.9 Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 1/25 (4%) Frame = +3 Query: 126 PCVLWLY-LSTYSTALHSFYNKCCP 197 P V WL S YSTAL SFY K P Sbjct: 449 PSVNWLISYSKYSTALESFYEKFDP 473
>SHARK_DROME (Q24145) Tyrosine-protein kinase shark (EC 2.7.10.2)| Length = 939 Score = 27.3 bits (59), Expect = 9.9 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = +1 Query: 58 MNSMILDCYNNTTSEVFLKNWYHPACCGSTYRLTVQHYIH 177 M ILD + T+ LK W CG Y L QH++H Sbjct: 749 MLQYILDHGHEITANAELKVWASQIACGMHY-LESQHFVH 787
>V121_ASFL5 (P26705) LIS 121-1 protein precursor| Length = 121 Score = 27.3 bits (59), Expect = 9.9 Identities = 14/44 (31%), Positives = 20/44 (45%) Frame = +1 Query: 19 CETIQLLFFCWDIMNSMILDCYNNTTSEVFLKNWYHPACCGSTY 150 C ++ FCWD N + + NTT L+N Y C S + Sbjct: 39 CTYMECCQFCWDCQNGLCVHKLGNTT---ILENEYVHPCIVSRW 79 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,682,624 Number of Sequences: 219361 Number of extensions: 783273 Number of successful extensions: 1925 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 1884 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1925 length of database: 80,573,946 effective HSP length: 81 effective length of database: 62,805,705 effective search space used: 1507336920 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)