ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl12d02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CJ082_HUMAN (Q8WW14) Protein C10orf82 28 4.1
2BGLR_MOUSE (P12265) Beta-glucuronidase precursor (EC 3.2.1.31) 27 9.2

>CJ082_HUMAN (Q8WW14) Protein C10orf82|
          Length = 154

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 157 SRSIALQALHVFNLKAQPMVLTC 225
           S    LQALH +NL+  P++L C
Sbjct: 71  SEETVLQALHQYNLQYHPLILEC 93



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>BGLR_MOUSE (P12265) Beta-glucuronidase precursor (EC 3.2.1.31)|
          Length = 648

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +3

Query: 78  LPGLHKSPPNIFSSKY 125
           +PG+H+ PP +FS +Y
Sbjct: 542 IPGIHEDPPRMFSEEY 557


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,026,908
Number of Sequences: 219361
Number of extensions: 944314
Number of successful extensions: 1604
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1604
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 1402043640
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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