Clone Name | rbastl12d01 |
---|---|
Clone Library Name | barley_pub |
>PHLC_CLOHA (P59026) Phospholipase C precursor (EC 3.1.4.3) (PLC)| (Phosphatidylcholine cholinephosphohydrolase) (Beta toxin) Length = 399 Score = 30.0 bits (66), Expect = 1.5 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +1 Query: 151 WRRTGAKQLTELLNLGLHLRGEMQPPYLP*NL 246 W++ +Q T LL GLH G+ PY P N+ Sbjct: 136 WKKGNYEQATWLLGQGLHYFGDFHTPYHPSNV 167
>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2) (Protein VASCULAR HIGHWAY 1) Length = 1143 Score = 29.3 bits (64), Expect = 2.6 Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 8/84 (9%) Frame = +3 Query: 57 NNRSLGQLNIPFQTCRTVEWSQIDPNSTSSNLAKDGG--------KATN*TTELRVALEG 212 NN+ G++ F C +EW N + + KD G + N + E Sbjct: 456 NNQLTGEIPPEFFNCSNIEWVSFTSNRLTGEVPKDFGILSRLAVLQLGNNNFTGEIPPEL 515 Query: 213 GNATTLPTLKSHRMPNYVTGALTP 284 G TTL L + N++TG + P Sbjct: 516 GKCTTLVWLDLN--TNHLTGEIPP 537
>PHLC_CLOSO (Q8VUZ6) Phospholipase C precursor (EC 3.1.4.3) (PLC)| (Phosphatidylcholine cholinephosphohydrolase) Length = 399 Score = 28.1 bits (61), Expect = 5.7 Identities = 10/27 (37%), Positives = 16/27 (59%) Frame = +1 Query: 151 WRRTGAKQLTELLNLGLHLRGEMQPPY 231 W++ K+ T LL G+H G++ PY Sbjct: 137 WKKGNYKEATFLLGQGMHYLGDLNTPY 163
>PHLC_CLOBI (P20419) Phospholipase C precursor (EC 3.1.4.3) (PLC)| (Phosphatidylcholine cholinephosphohydrolase) (Cbp) Length = 398 Score = 28.1 bits (61), Expect = 5.7 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = +1 Query: 151 WRRTGAKQLTELLNLGLHLRGEMQPPY 231 W + K+ T LL GLH G++ PY Sbjct: 135 WEKGNFKEATFLLGQGLHYLGDLNTPY 161
>COXN_BRAJA (P98000) Alternative cytochrome c oxidase subunit 1 (EC 1.9.3.1)| (Alternative cytochrome c oxidase polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3) subunit 1) Length = 591 Score = 27.7 bits (60), Expect = 7.5 Identities = 11/35 (31%), Positives = 23/35 (65%) Frame = -1 Query: 241 FKVGRVVAFPPSSATLSSVVQLVALPPSFARLLLV 137 F++G PPS+ +L++ + +VAL FA+++ + Sbjct: 480 FELGDAAFIPPSAHSLNAFITVVALTVGFAQMVFL 514
>HEMA_PTV10 (Q70KP1) Hemagglutinin-esterase homolog precursor (EC 3.1.1.53)| (HE) Length = 430 Score = 27.7 bits (60), Expect = 7.5 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Frame = -1 Query: 142 LVLFGSICDHST--VLHVWNGIFSCPKLLLLYCAADYPCF-YGTFCCDFG 2 LV+F S+ ST VL + FSC K L+ +C D CF C FG Sbjct: 183 LVIFNSVVKVSTQFVLPSSSDGFSCTKHLVPFCYIDGGCFEMSGVCYPFG 232
>DCR1A_HUMAN (Q6PJP8) DNA cross-link repair 1A protein (hSNM1) (hSNM1A)| Length = 1040 Score = 27.7 bits (60), Expect = 7.5 Identities = 15/57 (26%), Positives = 27/57 (47%) Frame = +3 Query: 120 QIDPNSTSSNLAKDGGKATN*TTELRVALEGGNATTLPTLKSHRMPNYVTGALTPIS 290 ++DPN+ S N+ K KAT+ + + + A +K H +P G T ++ Sbjct: 21 RVDPNNGSKNILKSVEKATDGKYQSKRSRNRKRAAEAKEVKDHEVPLGNAGCQTSVA 77
>CD3E_CANFA (P27597) T-cell surface glycoprotein CD3 epsilon chain precursor| Length = 202 Score = 27.3 bits (59), Expect = 9.8 Identities = 15/59 (25%), Positives = 34/59 (57%), Gaps = 2/59 (3%) Frame = -3 Query: 188 SSSVSCFAPVLRQVAASAVWIYLRPLNCSACLEWNI*LSQTSVII--LCCRLSMLLWYF 18 S +C+A +++ + ++YLR C+ C+E N+ ++ ++I+ +C L +LL + Sbjct: 91 SGYYACYADSIKEKS----YLYLRARVCANCIEVNL-MAVVTIIVADICLTLGLLLMVY 144
>PHLC1_CLOPE (P15310) Phospholipase C precursor (EC 3.1.4.3) (PLC)| (Phosphatidylcholine cholinephosphohydrolase) (Alpha-toxin) (Hemolysin) (Lecithinase) Length = 398 Score = 27.3 bits (59), Expect = 9.8 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = +1 Query: 151 WRRTGAKQLTELLNLGLHLRGEMQPPYLP*NL 246 W+R KQ T L +H G++ PY P N+ Sbjct: 137 WQRGNYKQATFYLGEAMHYFGDIDTPYHPANV 168 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,451,468 Number of Sequences: 219361 Number of extensions: 835264 Number of successful extensions: 2225 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2193 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2225 length of database: 80,573,946 effective HSP length: 85 effective length of database: 61,928,261 effective search space used: 1486278264 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)