Clone Name | rbastl12c07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | REG3B_MOUSE (P35230) Regenerating islet-derived protein 3 beta p... | 30 | 1.8 | 2 | GGABP_RAT (Q6AY97) GGA-binding partner | 29 | 2.3 | 3 | GGABP_MOUSE (Q9D8L5) GGA-binding partner | 29 | 2.3 | 4 | REG3G_RAT (P42854) Regenerating islet-derived protein 3 gamma pr... | 28 | 5.2 | 5 | LITH_PIG (Q29191) Lithostathine precursor [Contains: Lithostathi... | 27 | 8.9 |
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>REG3B_MOUSE (P35230) Regenerating islet-derived protein 3 beta precursor (Reg| III-beta) (Pancreatitis-associated protein 1) Length = 175 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/38 (34%), Positives = 23/38 (60%) Frame = -3 Query: 285 LLLHEGQGHRRLTDVPSLFIQC*RGAKLFFSYLVLIFR 172 +LL + QG L ++PS I C +G++ + SY +F+ Sbjct: 19 MLLSQVQGEDSLKNIPSARISCPKGSQAYGSYCYALFQ 56
>GGABP_RAT (Q6AY97) GGA-binding partner| Length = 442 Score = 29.3 bits (64), Expect = 2.3 Identities = 14/36 (38%), Positives = 24/36 (66%) Frame = -1 Query: 407 EERASRRAAKTVQRRSRVQLVEYLYGKRRGDSGSRR 300 E+R S +A + +R+R +LVEY+ +RR D +R+ Sbjct: 378 EQRRSEKAMEEAVKRTRDELVEYVREQRRLDQVTRQ 413
>GGABP_MOUSE (Q9D8L5) GGA-binding partner| Length = 442 Score = 29.3 bits (64), Expect = 2.3 Identities = 14/36 (38%), Positives = 24/36 (66%) Frame = -1 Query: 407 EERASRRAAKTVQRRSRVQLVEYLYGKRRGDSGSRR 300 E+R S +A + +R+R +LVEY+ +RR D +R+ Sbjct: 378 EQRRSEKAMEEAVKRTRDELVEYVREQRRLDQVTRQ 413
>REG3G_RAT (P42854) Regenerating islet-derived protein 3 gamma precursor (Reg| III-gamma) (Pancreatitis-associated protein 3) Length = 174 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = -3 Query: 285 LLLHEGQGHRRLTDVPSLFIQC*RGAKLFFSYLVLIF 175 +LL + QG DVP+ I C +G++ + SY +F Sbjct: 19 MLLSQVQGEDAKEDVPTSRISCPKGSRAYGSYCYALF 55
>LITH_PIG (Q29191) Lithostathine precursor [Contains: Lithostathine A chain]| (Fragment) Length = 122 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = -3 Query: 285 LLLHEGQGHRRLTDVPSLFIQC*RGAKLFFSYLVLIF 175 +LL + QG D PS I C +G+ + SY +F Sbjct: 19 MLLSQVQGEDSPADTPSARISCPKGSMAYASYCYALF 55 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,408,399 Number of Sequences: 219361 Number of extensions: 597308 Number of successful extensions: 1327 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1309 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1327 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 1349397000 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)