>gb|AY112423.1| Zea mays CL34056_1 mRNA sequence
          Length = 512

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                          
Query: 248 gtcagtcgtcgatgaccttggccctcatgcagcaggagggcccgcgc 294
           |||||||||||||| ||||||| |||||||||||||| |||||||||
Sbjct: 238 gtcagtcgtcgatggccttggctctcatgcagcaggacggcccgcgc 192



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                  
Query: 320 cgcgccgcttcccgtagaggtactccaccagctgcacccttgaccgccgctgcac 374
           ||||||||  ||||||||||||||||||||| |||||||  ||||||||||||||
Sbjct: 166 cgcgccgccgcccgtagaggtactccaccagatgcacccgcgaccgccgctgcac 112

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 90/109 (82%), Gaps = 9/109 (8%)
 Strand = Plus / Plus

                                                                            
Query: 251      agtcgtcgatgaccttggccctcatgcagcaggagggcccgcgcttcggccggcgggacc 310
                ||||||||||| ||||||| ||||||||||| || |||||||||  | |||||||     
Sbjct: 25570011 agtcgtcgatggccttggctctcatgcagcacgacggcccgcgccgctgccggcg----- 25570065

                                                                 
Query: 311      cgctgtcgccgcgccgcttcccgtagaggtactccaccagctgcaccct 359
                 ||||||||  || |||   |||||||||||||||||||||||||||||
Sbjct: 25570066 -gctgtcgcgccggcgc---ccgtagaggtactccaccagctgcaccct 25570110

>dbj|AK106406.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-H03, full
            insert sequence
          Length = 1637

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 90/109 (82%), Gaps = 9/109 (8%)
 Strand = Plus / Minus

                                                                        
Query: 251  agtcgtcgatgaccttggccctcatgcagcaggagggcccgcgcttcggccggcgggacc 310
            ||||||||||| ||||||| ||||||||||| || |||||||||  | |||||||     
Sbjct: 1369 agtcgtcgatggccttggctctcatgcagcacgacggcccgcgccgctgccggcg----- 1315

                                                             
Query: 311  cgctgtcgccgcgccgcttcccgtagaggtactccaccagctgcaccct 359
             ||||||||  || |||   |||||||||||||||||||||||||||||
Sbjct: 1314 -gctgtcgcgccggcgc---ccgtagaggtactccaccagctgcaccct 1270

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 90/109 (82%), Gaps = 9/109 (8%)
 Strand = Plus / Plus

                                                                            
Query: 251      agtcgtcgatgaccttggccctcatgcagcaggagggcccgcgcttcggccggcgggacc 310
                ||||||||||| ||||||| ||||||||||| || |||||||||  | |||||||     
Sbjct: 25498187 agtcgtcgatggccttggctctcatgcagcacgacggcccgcgccgctgccggcg----- 25498241

                                                                 
Query: 311      cgctgtcgccgcgccgcttcccgtagaggtactccaccagctgcaccct 359
                 ||||||||  || |||   |||||||||||||||||||||||||||||
Sbjct: 25498242 -gctgtcgcgccggcgc---ccgtagaggtactccaccagctgcaccct 25498286

>emb|AL928781.4|CNS08CCB Oryza sativa chromosome 12, . BAC OSJNBa0070E09 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 144084

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 90/109 (82%), Gaps = 9/109 (8%)
 Strand = Plus / Plus

                                                                          
Query: 251    agtcgtcgatgaccttggccctcatgcagcaggagggcccgcgcttcggccggcgggacc 310
              ||||||||||| ||||||| ||||||||||| || |||||||||  | |||||||     
Sbjct: 139393 agtcgtcgatggccttggctctcatgcagcacgacggcccgcgccgctgccggcg----- 139447

                                                               
Query: 311    cgctgtcgccgcgccgcttcccgtagaggtactccaccagctgcaccct 359
               ||||||||  || |||   |||||||||||||||||||||||||||||
Sbjct: 139448 -gctgtcgcgccggcgc---ccgtagaggtactccaccagctgcaccct 139492

>emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 127003

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 90/109 (82%), Gaps = 9/109 (8%)
 Strand = Plus / Minus

                                                                          
Query: 251    agtcgtcgatgaccttggccctcatgcagcaggagggcccgcgcttcggccggcgggacc 310
              ||||||||||| ||||||| ||||||||||| || |||||||||  | |||||||     
Sbjct: 103707 agtcgtcgatggccttggctctcatgcagcacgacggcccgcgccgctgccggcg----- 103653

                                                               
Query: 311    cgctgtcgccgcgccgcttcccgtagaggtactccaccagctgcaccct 359
               ||||||||  || |||   |||||||||||||||||||||||||||||
Sbjct: 103652 -gctgtcgcgccggcgc---ccgtagaggtactccaccagctgcaccct 103608

>gb|AC138214.8| Mus musculus chromosome 1, clone RP23-404A6, complete sequence
          Length = 203478

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 262    accttggccctcatgcagcag 282
              |||||||||||||||||||||
Sbjct: 101676 accttggccctcatgcagcag 101696

>gb|AC160465.3| Mus musculus chromosome 8, clone RP23-267N9, complete sequence
          Length = 224985

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 157   aagtctgctgcattgtctgaa 177
             |||||||||||||||||||||
Sbjct: 63920 aagtctgctgcattgtctgaa 63940

>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 164     ctgcattgtctgaagattaaa 184
               |||||||||||||||||||||
Sbjct: 2663828 ctgcattgtctgaagattaaa 2663808

>gb|AC162290.4| Mus musculus chromosome 8, clone RP23-227N17, complete sequence
          Length = 176486

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 157   aagtctgctgcattgtctgaa 177
             |||||||||||||||||||||
Sbjct: 54618 aagtctgctgcattgtctgaa 54598

>gb|AC102574.9| Mus musculus chromosome 8, clone RP23-239K24, complete sequence
          Length = 193168

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 157    aagtctgctgcattgtctgaa 177
              |||||||||||||||||||||
Sbjct: 129249 aagtctgctgcattgtctgaa 129229

>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 164     ctgcattgtctgaagattaaa 184
               |||||||||||||||||||||
Sbjct: 5817272 ctgcattgtctgaagattaaa 5817252

>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome
          Length = 2560265

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 253     tcgtcgatgaccttggccctcatg 276
               |||||||||| |||||||||||||
Sbjct: 2443553 tcgtcgatgagcttggccctcatg 2443530

>gb|AC140478.2| Mus musculus BAC clone RP24-149A3 from chromosome 6, complete sequence
          Length = 162440

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    acaatgaaatgaaacaagag 154
              ||||||||||||||||||||
Sbjct: 104805 acaatgaaatgaaacaagag 104824

>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 383     cggcgcgccggctggcacgc 402
               ||||||||||||||||||||
Sbjct: 1653285 cggcgcgccggctggcacgc 1653266

>emb|AL358943.13| Human DNA sequence from clone RP3-353O9 on chromosome 6 Contains the 5'
             end of the EPB41L2 gene for erythrocyte membrane protein
             band 4.1-like 2, complete sequence
          Length = 121355

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   acagttcacataattattta 123
             ||||||||||||||||||||
Sbjct: 23399 acagttcacataattattta 23418

>emb|AL138914.9| Human DNA sequence from clone RP11-15L1 on chromosome 13 Contains part of
              a novel gene, complete sequence
          Length = 153439

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 134    cacaatgaaatgaaacaaga 153
              ||||||||||||||||||||
Sbjct: 136298 cacaatgaaatgaaacaaga 136317

>emb|AJ404331.1|PDU404331 Prunus dulcis lox gene for lipoxygenase, exons 1-9
          Length = 6776

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 135  acaatgaaatgaaacaagagcaaa 158
            |||| |||||||||||||||||||
Sbjct: 1845 acaaggaaatgaaacaagagcaaa 1822

>gb|AC161890.4| Mus musculus 6 BAC RP23-356P12 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 243990

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 135   acaatgaaatgaaacaagag 154
             ||||||||||||||||||||
Sbjct: 83755 acaatgaaatgaaacaagag 83774

>gb|AC073855.5| Homo sapiens BAC clone RP11-799A12 from 4, complete sequence
          Length = 193024

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 75    tacttgaggtaatgaagaaa 94
             ||||||||||||||||||||
Sbjct: 58262 tacttgaggtaatgaagaaa 58281

>gb|AC154751.2| Mus musculus BAC clone RP24-399L21 from chromosome 14, complete sequence
          Length = 176992

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 127    agagcagcacaatgaaatgaaaca 150
              ||||||| ||||||||||||||||
Sbjct: 168585 agagcaggacaatgaaatgaaaca 168562

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 270     cctcatgcagcaggagggcc 289
               ||||||||||||||||||||
Sbjct: 3961446 cctcatgcagcaggagggcc 3961465

>emb|CT025857.10| Mouse DNA sequence from clone RP24-315F22 on chromosome 14, complete
             sequence
          Length = 107710

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 127   agagcagcacaatgaaatgaaaca 150
             ||||||| ||||||||||||||||
Sbjct: 19800 agagcaggacaatgaaatgaaaca 19777


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,582,762
Number of Sequences: 3902068
Number of extensions: 3582762
Number of successful extensions: 75638
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75459
Number of HSP's gapped (non-prelim): 179
length of query: 407
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 385
effective length of database: 17,147,199,772
effective search space: 6601671912220
effective search space used: 6601671912220
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)