>gb|AC136786.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0027P09,
              complete sequence
          Length = 171861

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 80/91 (87%)
 Strand = Plus / Minus

                                                                          
Query: 259    taactcctctgtagaacagcacgtaagctgcacctgacttcacttcttcctcattgatgg 318
              |||||| |||||| || ||||| || ||||||||||| || || ||||| ||||||||||
Sbjct: 150420 taactcttctgtaaaagagcacataggctgcacctgattttacatcttcttcattgatgg 150361

                                             
Query: 319    cagaaacatgactatcatcaaaattgtacca 349
              |||||||||| |||||||||||||| |||||
Sbjct: 150360 cagaaacatggctatcatcaaaattatacca 150330

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 80/91 (87%)
 Strand = Plus / Minus

                                                                            
Query: 259      taactcctctgtagaacagcacgtaagctgcacctgacttcacttcttcctcattgatgg 318
                |||||| |||||| || ||||| || ||||||||||| || || ||||| ||||||||||
Sbjct: 15740739 taactcttctgtaaaagagcacataggctgcacctgattttacatcttcttcattgatgg 15740680

                                               
Query: 319      cagaaacatgactatcatcaaaattgtacca 349
                |||||||||| |||||||||||||| |||||
Sbjct: 15740679 cagaaacatggctatcatcaaaattatacca 15740649

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 80/91 (87%)
 Strand = Plus / Minus

                                                                            
Query: 259      taactcctctgtagaacagcacgtaagctgcacctgacttcacttcttcctcattgatgg 318
                |||||| |||||| || ||||| || ||||||||||| || || ||||| ||||||||||
Sbjct: 15828116 taactcttctgtaaaagagcacataggctgcacctgattttacatcttcttcattgatgg 15828057

                                               
Query: 319      cagaaacatgactatcatcaaaattgtacca 349
                |||||||||| |||||||||||||| |||||
Sbjct: 15828056 cagaaacatggctatcatcaaaattatacca 15828026

>emb|AL606589.3|OSJN00021 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0008A08,
             complete sequence
          Length = 130521

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 179   ctcagattatctttggctagatctgc 204
             |||||||||| |||||||||||||||
Sbjct: 73362 ctcagattatgtttggctagatctgc 73387

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 179      ctcagattatctttggctagatctgc 204
                |||||||||| |||||||||||||||
Sbjct: 15886797 ctcagattatgtttggctagatctgc 15886822

>gb|AC004495.1| Homo sapiens chromosome 16, cosmid clone 400H11 (LANL), complete
             sequence
          Length = 35528

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 125   acacacaaaaaggaaccaaaa 145
             |||||||||||||||||||||
Sbjct: 20034 acacacaaaaaggaaccaaaa 20014

>ref|XM_866609.1| PREDICTED: Bos taurus similar to ubiquitin specific protease,
            proto-oncogene isoform a, transcript variant 3
            (LOC508042), mRNA
          Length = 4634

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 269  gtagaacagcacgtaagctgc 289
            |||||||||||||||||||||
Sbjct: 3384 gtagaacagcacgtaagctgc 3364

>ref|XM_584767.2| PREDICTED: Bos taurus similar to ubiquitin specific protease,
            proto-oncogene isoform a, transcript variant 1
            (LOC508042), mRNA
          Length = 2573

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 269  gtagaacagcacgtaagctgc 289
            |||||||||||||||||||||
Sbjct: 1323 gtagaacagcacgtaagctgc 1303

>emb|Z49067.1|CEC44F1 Caenorhabditis elegans Cosmid C44F1, complete sequence
          Length = 19201

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 118   caattccacacacaaaaagga 138
             |||||||||||||||||||||
Sbjct: 18804 caattccacacacaaaaagga 18824

>gb|AC021607.9| Homo sapiens chromosome 18, clone RP11-233O10, complete sequence
          Length = 157383

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 244    ctccatctgcttttgtaactc 264
              |||||||||||||||||||||
Sbjct: 105477 ctccatctgcttttgtaactc 105457

>ref|NM_065364.2| Caenorhabditis elegans Adenylyl CYclase family member (acy-3) (acy-3)
            mRNA, complete cds
          Length = 3608

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 118  caattccacacacaaaaagga 138
            |||||||||||||||||||||
Sbjct: 1294 caattccacacacaaaaagga 1274

>gb|AC157499.2| Pan troglodytes BAC clone CH251-379O4 from chromosome unknown, complete
              sequence
          Length = 156656

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 244    ctccatctgcttttgtaactc 264
              |||||||||||||||||||||
Sbjct: 136192 ctccatctgcttttgtaactc 136212

>gb|AC007151.2|AC007151 Homo sapiens clone RPCI-11_95J11, complete sequence
          Length = 165196

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 125  acacacaaaaaggaaccaaaa 145
            |||||||||||||||||||||
Sbjct: 8427 acacacaaaaaggaaccaaaa 8447

>dbj|AK130579.1| Homo sapiens cDNA FLJ27069 fis, clone SPL01503
          Length = 2632

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 125  acacacaaaaaggaaccaaaa 145
            |||||||||||||||||||||
Sbjct: 2177 acacacaaaaaggaaccaaaa 2157

>gb|AC009802.13|AC009802 Homo sapiens chromosome 18, clone RP11-793J2, complete sequence
          Length = 191395

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 244   ctccatctgcttttgtaactc 264
             |||||||||||||||||||||
Sbjct: 20443 ctccatctgcttttgtaactc 20423

>gb|AY129336.1| Mycobacteriophage Che9d, complete genome
          Length = 56276

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 235   tgcttgctgctccatctgct 254
             ||||||||||||||||||||
Sbjct: 12404 tgcttgctgctccatctgct 12385

>gb|AC115440.6| Rattus norvegicus 4 BAC CH230-183D1 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 143322

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 309   tcattgatggcagaaacatg 328
             ||||||||||||||||||||
Sbjct: 24211 tcattgatggcagaaacatg 24230

>gb|AC022022.10| Homo sapiens chromosome 10 clone RP11-351O1, complete sequence
          Length = 183604

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   attccacacacaaaaaggaa 139
             ||||||||||||||||||||
Sbjct: 50939 attccacacacaaaaaggaa 50920

>gb|AC164653.3| Gallus gallus BAC clone CH261-187D17 from chromosome unknown, complete
             sequence
          Length = 224272

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 288   gcacctgacttcacttcttc 307
             ||||||||||||||||||||
Sbjct: 59431 gcacctgacttcacttcttc 59450

>emb|CR352917.1| Gallus gallus finished cDNA, clone ChEST402f19
          Length = 794

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 229 ttccattgcttgctgctcca 248
           ||||||||||||||||||||
Sbjct: 501 ttccattgcttgctgctcca 482

>gb|AC131718.5| Mus musculus BAC clone RP23-171B16 from 6, complete sequence
          Length = 199299

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 244   ctccatctgcttttgtaact 263
             ||||||||||||||||||||
Sbjct: 74533 ctccatctgcttttgtaact 74514

>dbj|AP004373.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-652L13, complete
            sequences
          Length = 96727

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 211  gtttcacacatgactgggtt 230
            ||||||||||||||||||||
Sbjct: 5216 gtttcacacatgactgggtt 5235


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,225,593
Number of Sequences: 3902068
Number of extensions: 3225593
Number of successful extensions: 65705
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65616
Number of HSP's gapped (non-prelim): 89
length of query: 355
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 333
effective length of database: 17,147,199,772
effective search space: 5710017524076
effective search space used: 5710017524076
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)