ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl12c04 |
|---|---|
| Clone Library Name | barley_pub |
>YQG4_CAEEL (Q09499) Putative serine/threonine-protein kinase C41C4.4 precursor| (EC 2.7.11.1) Length = 983 Score = 42.4 bits (98), Expect = 3e-04 Identities = 18/38 (47%), Positives = 27/38 (71%) Frame = -3 Query: 326 LPEGFDRYFSSRFPKLLIEVYKVMSVYCKDEEDFRKYF 213 +P+ F YF+SRFP+LL+ VYK + YC E F++Y+ Sbjct: 887 IPDQFLHYFTSRFPRLLLHVYKA-TEYCSGEAVFKRYY 923
>ERN1_MOUSE (Q9EQY0) Serine/threonine-protein kinase/endoribonuclease IRE1| precursor (Inositol-requiring protein 1) (IRE1a) (Ire1-alpha) (Endoplasmic reticulum-to-nucleus signaling 1) [Includes: Serine/threonine-protein kinase (EC 2.7.11.1); Endoribonucle Length = 977 Score = 38.5 bits (88), Expect = 0.004 Identities = 17/38 (44%), Positives = 25/38 (65%) Frame = -3 Query: 326 LPEGFDRYFSSRFPKLLIEVYKVMSVYCKDEEDFRKYF 213 +P+ F RYF+SRFP LL Y+ M + C+ E F+ Y+ Sbjct: 925 IPDDFVRYFTSRFPHLLSHTYQAMEL-CRHERLFQTYY 961
>IRE1_YEAST (P32361) Serine/threonine-protein kinase/endoribonuclease IRE1| precursor (Endoplasmic reticulum-to-nucleus signaling 1) [Includes: Serine/threonine-protein kinase (EC 2.7.11.1); Endoribonuclease (EC 3.1.26.-)] Length = 1115 Score = 37.0 bits (84), Expect = 0.012 Identities = 15/37 (40%), Positives = 24/37 (64%) Frame = -3 Query: 326 LPEGFDRYFSSRFPKLLIEVYKVMSVYCKDEEDFRKY 216 +P+GF YF+ RFP LLI VY ++ D++ R++ Sbjct: 1076 VPDGFYDYFTKRFPNLLIGVYMIVKENLSDDQILREF 1112
>ERN2_HUMAN (Q76MJ5) Serine/threonine-protein kinase/endoribonuclease IRE2| precursor (Inositol-requiring protein 2) (hIRE2p) (IRE1b) (Ire1-beta) (Endoplasmic reticulum-to-nucleus signaling 2) [Includes: Serine/threonine-protein kinase (EC 2.7.11.1); Endor Length = 925 Score = 37.0 bits (84), Expect = 0.012 Identities = 16/38 (42%), Positives = 26/38 (68%) Frame = -3 Query: 326 LPEGFDRYFSSRFPKLLIEVYKVMSVYCKDEEDFRKYF 213 +P+GF +YF++RFP+LL+ ++VM C E F Y+ Sbjct: 873 VPDGFVQYFTNRFPQLLLHTHRVMR-SCASESLFLPYY 909
>ERN2_MOUSE (Q9Z2E3) Serine/threonine-protein kinase/endoribonuclease IRE2| precursor (Inositol-requiring protein 2) (IRE1b) (Ire1-beta) (Endoplasmic reticulum-to-nucleus signaling 2) (mIre1) [Includes: Serine/threonine-protein kinase (EC 2.7.11.1); Endori Length = 911 Score = 36.2 bits (82), Expect = 0.021 Identities = 16/38 (42%), Positives = 23/38 (60%) Frame = -3 Query: 326 LPEGFDRYFSSRFPKLLIEVYKVMSVYCKDEEDFRKYF 213 LP GF +YF+ RFP+LL+ ++ M C E F Y+ Sbjct: 861 LPAGFIQYFTQRFPRLLLHTHRAMRT-CASESLFLPYY 897
>ERN1_HUMAN (O75460) Serine/threonine-protein kinase/endoribonuclease IRE1| precursor (Inositol-requiring protein 1) (hIRE1p) (IRE1a) (Ire1-alpha) (Endoplasmic reticulum-to-nucleus signaling 1) [Includes: Serine/threonine-protein kinase (EC 2.7.11.1); Endo Length = 977 Score = 36.2 bits (82), Expect = 0.021 Identities = 17/38 (44%), Positives = 23/38 (60%) Frame = -3 Query: 326 LPEGFDRYFSSRFPKLLIEVYKVMSVYCKDEEDFRKYF 213 LP+ F YF+SRFP LL Y+ M + C E F+ Y+ Sbjct: 925 LPDDFVCYFTSRFPHLLAHTYRAMEL-CSHERLFQPYY 961
>FAM5C_RAT (Q8K1M7) Protein FAM5C precursor (BMP/retinoic acid-inducible| neural-specific protein 3) Length = 766 Score = 30.4 bits (67), Expect = 1.2 Identities = 23/77 (29%), Positives = 37/77 (48%) Frame = +1 Query: 85 SLMISSFNGNMIQITCTYILLGEGC*CIQ*RDDICFSYTELPMKYFLKSSSSLQ*TDMTL 264 S+ I + N+++IT T+ + D+ F LPM YFL +S T M L Sbjct: 293 SMDIQAMEENLLRITETWKAYNSD---FEDSDEFKFFMKRLPMNYFLNTS-----TIMHL 344 Query: 265 YTSISSFGNRLEKYRSN 315 +T S+F R E+ ++ Sbjct: 345 WTMDSNFQRRYEQLENS 361
>FAM5C_MOUSE (Q499E0) Protein FAM5C precursor| Length = 766 Score = 30.4 bits (67), Expect = 1.2 Identities = 23/77 (29%), Positives = 37/77 (48%) Frame = +1 Query: 85 SLMISSFNGNMIQITCTYILLGEGC*CIQ*RDDICFSYTELPMKYFLKSSSSLQ*TDMTL 264 S+ I + N+++IT T+ + D+ F LPM YFL +S T M L Sbjct: 293 SMDIQAMEENLLRITETWKAYNSD---FEDSDEFKFFMKRLPMNYFLNTS-----TIMHL 344 Query: 265 YTSISSFGNRLEKYRSN 315 +T S+F R E+ ++ Sbjct: 345 WTMDSNFQRRYEQLENS 361
>RN5A_MOUSE (Q05921) 2-5A-dependent ribonuclease (EC 3.1.26.-) (2-5A-dependent| RNase) (Ribonuclease L) (RNase L) (Ribonuclease 4) Length = 735 Score = 28.5 bits (62), Expect = 4.4 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = -3 Query: 308 RYFSSRFPKLLIEVYKVMSVYCKDEEDFRKYF 213 RYF FP L+I +YK + E ++RK+F Sbjct: 689 RYFQETFPDLVIYIYKKLK-----ETEYRKHF 715
>TRPA_LEPBI (Q5MI53) Tryptophan synthase alpha chain (EC 4.2.1.20)| Length = 266 Score = 28.1 bits (61), Expect = 5.7 Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 7/72 (9%) Frame = -2 Query: 207 ELGITKADVI---PLLYALTAFT*QNVCTCD-LYHITIEGRNHKRSQPLICTLYYTELYC 40 ELGI +D + P++ A + +N + D ++ +T + HK+ PL+ Y+ +Y Sbjct: 47 ELGIPFSDPVADGPVIQRAVARSLKNKFSFDEIFRVTKQIHLHKQETPLVYLTYFNPIYH 106 Query: 39 YSVT---DKKKD 13 +T D KD Sbjct: 107 CGITKFLDNAKD 118 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,876,911 Number of Sequences: 219361 Number of extensions: 846935 Number of successful extensions: 1495 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1482 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1495 length of database: 80,573,946 effective HSP length: 84 effective length of database: 62,147,622 effective search space used: 1491542928 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
