ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl12c03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ507100.1|HVU507100 Hordeum vulgare partial mRNA for NBS-LR... 807 0.0
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
3dbj|AP003314.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
4dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
5gb|AC019043.8| Homo sapiens BAC clone RP11-11B21 from 7, complet... 48 0.023
6gb|AY205342.1| Ehrlichia canis strain New Mexico-1 VirB9 gene, c... 48 0.023
7gb|AF546158.1| Ehrlichia canis type IV secretion component (virB... 48 0.023
8gb|AY205343.1| Ehrlichia canis strain Venezuela VirB9 gene, comp... 48 0.023
9gb|AY205341.1| Ehrlichia canis strain Hawaii VirB9 gene, complet... 48 0.023
10gb|AY205340.1| Ehrlichia canis strain California VirB9 gene, com... 48 0.023
11gb|AY205339.1| Ehrlichia canis strain Arizona VirB9 gene, comple... 48 0.023
12gb|CP000107.1| Ehrlichia canis str. Jake, complete genome 48 0.023
13gb|AC156570.2| Mus musculus BAC clone RP23-242N11 from chromosom... 44 0.35
14gb|AC132362.3| Mus musculus BAC clone RP23-455B5 from chromosome... 44 0.35
15gb|AC130840.3| Mus musculus BAC clone RP24-443G4 from chromosome... 44 0.35
16gb|AC124186.3| Mus musculus BAC clone RP23-232B20 from chromosom... 44 0.35
17gb|AC074269.8| Homo sapiens 3 BAC RP11-485H21 (Roswell Park Canc... 44 0.35
18gb|AC170911.3| Mus musculus BAC clone RP23-199D18 from chromosom... 44 0.35
19gb|AY543837.1| Salmo salar clone Alu306 microsatellite sequence 42 1.4
20gb|AC011352.6| Homo sapiens chromosome 5 clone CTC-327F10, compl... 42 1.4
21gb|AC121932.2| Mus musculus BAC clone RP24-205N24 from 17, compl... 42 1.4
22emb|CR352246.7| Zebrafish DNA sequence from clone CH211-160H10 i... 42 1.4
23gb|AC025105.10| Homo sapiens chromosome 18, clone RP11-695P1, co... 42 1.4
24gb|AC160983.2| Mus musculus BAC clone RP23-335A9 from chromosome... 42 1.4
25gb|AC097109.4| Homo sapiens BAC clone CTD-2041O2 from 4, complet... 42 1.4
26gb|AC116003.7| Homo sapiens chromosome 18, clone RP11-321M21, co... 42 1.4
27emb|BX323551.8| Mouse DNA sequence from clone RP23-169N21 on chr... 42 1.4
28gb|AC153694.1| Mus musculus BAC RP23-333I12 (Roswell Park Cance... 40 5.5
29gb|AC164429.3| Mus musculus BAC clone RP24-127N11 from chromosom... 40 5.5
30gb|AC161416.2| Mus musculus BAC clone RP23-306A2 from chromosome... 40 5.5
31gb|AC157930.7| Mus musculus chromosome 5, clone RP24-151E22, com... 40 5.5
32gb|AC103355.9| Mus musculus chromosome 14, clone RP24-482C10, co... 40 5.5
33gb|AC101737.6| Mus musculus chromosome 1, clone RP23-471L1, comp... 40 5.5
34emb|CR385082.11| Zebrafish DNA sequence from clone DKEY-4E22 in ... 40 5.5
35emb|CR318664.15| Zebrafish DNA sequence from clone CH211-59L22 i... 40 5.5
36ref|XM_503212.1| Yarrowia lipolytica CLIB122, YALI0D23947g predi... 40 5.5
37emb|AL356737.9| Human DNA sequence from clone RP11-118A1 on chro... 40 5.5
38emb|AL353683.7| Human DNA sequence from clone RP11-450P11 on chr... 40 5.5
39emb|AL121763.25|HSJ914M10 Human DNA sequence from clone RP5-914M... 40 5.5
40emb|BX901898.15| Zebrafish DNA sequence from clone DKEY-148E3 in... 40 5.5
41emb|BX065558.1|CNS09MQY Single read from an extremity of a full-... 40 5.5
42gb|AC161234.7| Mus musculus chromosome 1, clone RP24-392G9, comp... 40 5.5
43gb|AC132213.1| Drosophila pseudoobscura FOSMID DPSF1-548A8 (Chi... 40 5.5
44emb|BX470147.17| Zebrafish DNA sequence from clone CH211-169N14 ... 40 5.5
45emb|BX546452.9| Zebrafish DNA sequence from clone DKEYP-8B11 in ... 40 5.5
46emb|BX284692.14| Zebrafish DNA sequence from clone CH211-282O22 ... 40 5.5
47gb|AC156278.8| Mus musculus 6 BAC RP24-249N9 (Roswell Park Cance... 40 5.5
48emb|BX572078.5| Zebrafish DNA sequence from clone DKEY-77G12 in ... 40 5.5
49gb|AC102477.18| Mus musculus chromosome 5, clone RP24-405C17, co... 40 5.5
50gb|AC153927.6| Mus musculus 6 BAC RP23-74G1 (Roswell Park Cancer... 40 5.5
51dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
52dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
53gb|AC009486.4| Homo sapiens BAC clone RP11-333O1 from 2, complet... 40 5.5
54dbj|AP005801.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
55dbj|AP004096.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
56emb|BX005313.4| Zebrafish DNA sequence from clone CH211-119C24, ... 40 5.5
57gb|AC132387.4| Mus musculus BAC clone RP23-440M14 from 1, comple... 40 5.5
58emb|CR812482.14| Zebrafish DNA sequence from clone CH211-157N19 ... 40 5.5
59gb|AC131987.10| Mus musculus chromosome 13, clone RP24-184L10, c... 40 5.5
60gb|AC110885.14| Mus musculus chromosome 7, clone RP24-342P18, co... 40 5.5
61emb|BX088567.6| Mouse DNA sequence from clone RP23-21L20 on chro... 40 5.5
62emb|AL732494.16| Mouse DNA sequence from clone RP23-322L22 on ch... 40 5.5
63emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 40 5.5
64dbj|AP004579.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 5.5
65dbj|AP004576.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 5.5
66gb|AC155302.2| Mus musculus BAC clone RP24-227A11 from chromosom... 40 5.5
67emb|AL845170.5| Mouse DNA sequence from clone RP23-282A22 on chr... 40 5.5 
>emb|AJ507100.1|HVU507100 Hordeum vulgare partial mRNA for NBS-LRR disease resistance protein
            homologue (rga S-120 gene)
          Length = 3245

 Score =  807 bits (407), Expect = 0.0
 Identities = 410/411 (99%)
 Strand = Plus / Minus

                                                                        
Query: 2    tttgcaaaaaagtgctcttttattgaaggatcaagctgatacaaatagataaaccttgcg 61
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3238 tttgcaaaaaagtgctcttttattgaaggatcaagctgatacaaatagataaaccttgcg 3179

                                                                        
Query: 62   tctacaataacgcgatgacaaaccatcgaggatgcatatacacacaccaatacaaacaga 121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3178 tctacaataacgcgatgacaaaccatcgaggatgcatatacacacaccaatacaaacaga 3119

                                                                        
Query: 122  aaagccaagaagaagaacgtacacaacataagccttcaagagaactccacctagcgccta 181
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 3118 aaagccaagaagaagaacgcacacaacataagccttcaagagaactccacctagcgccta 3059

                                                                        
Query: 182  tttgcttcatggcaatgcacactccataacaaacaggttctttgctacccacaaagaggt 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3058 tttgcttcatggcaatgcacactccataacaaacaggttctttgctacccacaaagaggt 2999

                                                                        
Query: 242  aagggtccaaaaatccgaaacgaccccatcaaagctggctggagaaggaacaagtggaag 301
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2998 aagggtccaaaaatccgaaacgaccccatcaaagctggctggagaaggaacaagtggaag 2939

                                                                        
Query: 302  cactaccaagacctcaaaatgacgcctccaagaaggtgaatgatgcccatccatctttta 361
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2938 cactaccaagacctcaaaatgacgcctccaagaaggtgaatgatgcccatccatctttta 2879

                                                               
Query: 362  atgctcaacaaattcagtagccttcacaggatgctgcatccatctttcaat 412
            |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2878 atgctcaacaaattcagtagccttcacaggatgctgcatccatctttcaat 2828
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                             
Query: 316      caaaatgacgcctccaagaaggtgaatga 344
                |||||||||||||||||| ||||||||||
Sbjct: 24258402 caaaatgacgcctccaaggaggtgaatga 24258374
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>dbj|AP003314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0046B10
          Length = 142596

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 316   caaaatgacgcctccaagaaggtgaatga 344
             |||||||||||||||||| ||||||||||
Sbjct: 82966 caaaatgacgcctccaaggaggtgaatga 82938
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>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0410E01
          Length = 166753

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 316  caaaatgacgcctccaagaaggtgaatga 344
            |||||||||||||||||| ||||||||||
Sbjct: 4306 caaaatgacgcctccaaggaggtgaatga 4278
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>gb|AC019043.8| Homo sapiens BAC clone RP11-11B21 from 7, complete sequence
          Length = 211680

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 263    gaccccatcaaagctggctggagaagga 290
              |||||||||| |||||||||||||||||
Sbjct: 117741 gaccccatcacagctggctggagaagga 117714
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>gb|AY205342.1| Ehrlichia canis strain New Mexico-1 VirB9 gene, complete cds
          Length = 911

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 187 ttcatggcaatgcacactccataa 210
           ||||||||||||||||||||||||
Sbjct: 125 ttcatggcaatgcacactccataa 148
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>gb|AF546158.1| Ehrlichia canis type IV secretion component (virB9) gene, complete
           cds
          Length = 1003

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 187 ttcatggcaatgcacactccataa 210
           ||||||||||||||||||||||||
Sbjct: 174 ttcatggcaatgcacactccataa 197
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>gb|AY205343.1| Ehrlichia canis strain Venezuela VirB9 gene, complete cds
          Length = 911

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 187 ttcatggcaatgcacactccataa 210
           ||||||||||||||||||||||||
Sbjct: 125 ttcatggcaatgcacactccataa 148
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>gb|AY205341.1| Ehrlichia canis strain Hawaii VirB9 gene, complete cds
          Length = 911

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 187 ttcatggcaatgcacactccataa 210
           ||||||||||||||||||||||||
Sbjct: 125 ttcatggcaatgcacactccataa 148
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>gb|AY205340.1| Ehrlichia canis strain California VirB9 gene, complete cds
          Length = 911

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 187 ttcatggcaatgcacactccataa 210
           ||||||||||||||||||||||||
Sbjct: 125 ttcatggcaatgcacactccataa 148
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>gb|AY205339.1| Ehrlichia canis strain Arizona VirB9 gene, complete cds
          Length = 911

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 187 ttcatggcaatgcacactccataa 210
           ||||||||||||||||||||||||
Sbjct: 125 ttcatggcaatgcacactccataa 148
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>gb|CP000107.1| Ehrlichia canis str. Jake, complete genome
          Length = 1315030

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 187   ttcatggcaatgcacactccataa 210
             ||||||||||||||||||||||||
Sbjct: 25184 ttcatggcaatgcacactccataa 25161
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>gb|AC156570.2| Mus musculus BAC clone RP23-242N11 from chromosome 3, complete sequence
          Length = 198738

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 365    ctcaacaaattcagtagccttc 386
              ||||||||||||||||||||||
Sbjct: 189587 ctcaacaaattcagtagccttc 189608



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 365    ctcaacaaattcagtagccttc 386
              ||||||||||||||||||||||
Sbjct: 103761 ctcaacaaattcagtagccttc 103782
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>gb|AC132362.3| Mus musculus BAC clone RP23-455B5 from chromosome 3, complete sequence
          Length = 164762

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 365    ctcaacaaattcagtagccttc 386
              ||||||||||||||||||||||
Sbjct: 131530 ctcaacaaattcagtagccttc 131551
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>gb|AC130840.3| Mus musculus BAC clone RP24-443G4 from chromosome 3, complete sequence
          Length = 175133

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 365    ctcaacaaattcagtagccttc 386
              ||||||||||||||||||||||
Sbjct: 103449 ctcaacaaattcagtagccttc 103428
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>gb|AC124186.3| Mus musculus BAC clone RP23-232B20 from chromosome 3, complete sequence
          Length = 195957

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 365   ctcaacaaattcagtagccttc 386
             ||||||||||||||||||||||
Sbjct: 78814 ctcaacaaattcagtagccttc 78835
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>gb|AC074269.8| Homo sapiens 3 BAC RP11-485H21 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 182853

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 99     atacacacaccaatacaaacagaaaa 124
              |||||||||| |||||||||||||||
Sbjct: 156879 atacacacactaatacaaacagaaaa 156904
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>gb|AC170911.3| Mus musculus BAC clone RP23-199D18 from chromosome 3, complete
            sequence
          Length = 196971

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 365  ctcaacaaattcagtagccttc 386
            ||||||||||||||||||||||
Sbjct: 8903 ctcaacaaattcagtagccttc 8882
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>gb|AY543837.1| Salmo salar clone Alu306 microsatellite sequence
          Length = 397

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 99  atacacacaccaatacaaaca 119
           |||||||||||||||||||||
Sbjct: 154 atacacacaccaatacaaaca 174
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>gb|AC011352.6| Homo sapiens chromosome 5 clone CTC-327F10, complete sequence
          Length = 166644

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 92    gatgcatatacacacaccaatacaa 116
             ||||||||| |||||||||||||||
Sbjct: 74451 gatgcatattcacacaccaatacaa 74427
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>gb|AC121932.2| Mus musculus BAC clone RP24-205N24 from 17, complete sequence
          Length = 152782

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 101   acacacaccaatacaaacagaaaag 125
             |||||||| ||||||||||||||||
Sbjct: 41331 acacacacaaatacaaacagaaaag 41307
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>emb|CR352246.7| Zebrafish DNA sequence from clone CH211-160H10 in linkage group 13,
             complete sequence
          Length = 87130

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 7     aaaaaagtgctcttttattga 27
             |||||||||||||||||||||
Sbjct: 13250 aaaaaagtgctcttttattga 13270
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>gb|AC025105.10| Homo sapiens chromosome 18, clone RP11-695P1, complete sequence
          Length = 201027

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 210    acaaacaggttctttgctacccaca 234
              ||||||||||||||| |||||||||
Sbjct: 195397 acaaacaggttcttttctacccaca 195421
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>gb|AC160983.2| Mus musculus BAC clone RP23-335A9 from chromosome 9, complete sequence
          Length = 188085

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 93    atgcatatacacacaccaatacaaacaga 121
             ||||||||||||||||| ||||| |||||
Sbjct: 69052 atgcatatacacacacctatacacacaga 69024
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>gb|AC097109.4| Homo sapiens BAC clone CTD-2041O2 from 4, complete sequence
          Length = 124829

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 101   acacacaccaatacaaacagaaaagccaa 129
             ||||||||||| ||||||| |||||||||
Sbjct: 71539 acacacaccaaaacaaacaaaaaagccaa 71511
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>gb|AC116003.7| Homo sapiens chromosome 18, clone RP11-321M21, complete sequence
          Length = 189167

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 210   acaaacaggttctttgctacccaca 234
             ||||||||||||||| |||||||||
Sbjct: 57976 acaaacaggttcttttctacccaca 58000
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>emb|BX323551.8| Mouse DNA sequence from clone RP23-169N21 on chromosome 4, complete
             sequence
          Length = 59167

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 93    atgcatatacacacaccaatacaaacaga 121
             ||||||| ||||||||||||||| |||||
Sbjct: 40364 atgcatagacacacaccaatacacacaga 40336
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>gb|AC153694.1| Mus musculus  BAC RP23-333I12 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 208414

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 227    tacccacaaagaggtaaggg 246
              ||||||||||||||||||||
Sbjct: 185480 tacccacaaagaggtaaggg 185499
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>gb|AC164429.3| Mus musculus BAC clone RP24-127N11 from chromosome 14, complete
             sequence
          Length = 169281

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   ctccataacaaacaggttct 222
             ||||||||||||||||||||
Sbjct: 81853 ctccataacaaacaggttct 81834
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>gb|AC161416.2| Mus musculus BAC clone RP23-306A2 from chromosome 1, complete sequence
          Length = 196764

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 346   gcccatccatcttttaatgc 365
             ||||||||||||||||||||
Sbjct: 42165 gcccatccatcttttaatgc 42184
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>gb|AC157930.7| Mus musculus chromosome 5, clone RP24-151E22, complete sequence
          Length = 146346

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 96   catatacacacaccaatacaaaca 119
            ||||||||||||| ||||||||||
Sbjct: 9133 catatacacacacaaatacaaaca 9156
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>gb|AC103355.9| Mus musculus chromosome 14, clone RP24-482C10, complete sequence
          Length = 192348

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 203    ctccataacaaacaggttct 222
              ||||||||||||||||||||
Sbjct: 173894 ctccataacaaacaggttct 173875
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>gb|AC101737.6| Mus musculus chromosome 1, clone RP23-471L1, complete sequence
          Length = 235405

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 96     catatacacacaccaataca 115
              ||||||||||||||||||||
Sbjct: 218760 catatacacacaccaataca 218779
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>emb|CR385082.11| Zebrafish DNA sequence from clone DKEY-4E22 in linkage group 16, complete
              sequence
          Length = 149331

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 205    ccataacaaacaggttcttt 224
              ||||||||||||||||||||
Sbjct: 126484 ccataacaaacaggttcttt 126503
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>emb|CR318664.15| Zebrafish DNA sequence from clone CH211-59L22 in linkage group 21,
             complete sequence
          Length = 161092

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     aaaaagtgctcttttattga 27
             ||||||||||||||||||||
Sbjct: 14454 aaaaagtgctcttttattga 14473
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>ref|XM_503212.1| Yarrowia lipolytica CLIB122, YALI0D23947g predicted mRNA
          Length = 2127

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 319  aatgacgcctccaagaaggt 338
            ||||||||||||||||||||
Sbjct: 1585 aatgacgcctccaagaaggt 1604
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>emb|AL356737.9| Human DNA sequence from clone RP11-118A1 on chromosome 13 Contains 2
             novel genes, complete sequence
          Length = 120269

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 96    catatacacacaccaatacaaaca 119
             |||||||||||||| |||||||||
Sbjct: 27793 catatacacacacccatacaaaca 27770
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>emb|AL353683.7| Human DNA sequence from clone RP11-450P11 on chromosome 9 Contains part
             of the 5' UTR of a novel gene (FLJ31810), complete
             sequence
          Length = 198463

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   acaccaatacaaacagaaaa 124
             ||||||||||||||||||||
Sbjct: 66245 acaccaatacaaacagaaaa 66226
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>emb|AL121763.25|HSJ914M10 Human DNA sequence from clone RP5-914M10 on chromosome 20q12 Contains
              part of the PTPRT gene for protein tyrosine phosphatase
              receptor type T, ESTs, STSs and GSSs, complete sequence
          Length = 123988

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 96     catatacacacaccaatacaaaca 119
              |||||||||||||| |||||||||
Sbjct: 104637 catatacacacacccatacaaaca 104660
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>emb|BX901898.15| Zebrafish DNA sequence from clone DKEY-148E3 in linkage group 1, complete
              sequence
          Length = 249378

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 9      aaaagtgctcttttattgaa 28
              ||||||||||||||||||||
Sbjct: 188798 aaaagtgctcttttattgaa 188817
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>emb|BX065558.1|CNS09MQY Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC49CA08 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 1015

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 92  gatgcatatacacacaccaa 111
           ||||||||||||||||||||
Sbjct: 976 gatgcatatacacacaccaa 957
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>gb|AC161234.7| Mus musculus chromosome 1, clone RP24-392G9, complete sequence
          Length = 141914

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    catatacacacaccaataca 115
             ||||||||||||||||||||
Sbjct: 61758 catatacacacaccaataca 61777
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>gb|AC132213.1| Drosophila pseudoobscura  FOSMID DPSF1-548A8 (Children's Hospital
             Oakland Research Institute Drosophila pseudoobscura FOSMID
             Library) complete sequence
          Length = 38490

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 358   tttaatgctcaacaaattcagtagcctt 385
             |||||||||||| |||||||||| ||||
Sbjct: 31215 tttaatgctcaagaaattcagtaacctt 31242
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>emb|BX470147.17| Zebrafish DNA sequence from clone CH211-169N14 in linkage group 16,
             complete sequence
          Length = 151584

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   ccataacaaacaggttcttt 224
             ||||||||||||||||||||
Sbjct: 92486 ccataacaaacaggttcttt 92467
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>emb|BX546452.9| Zebrafish DNA sequence from clone DKEYP-8B11 in linkage group 25,
              complete sequence
          Length = 170113

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 193    gcaatgcacactccataacaaaca 216
              ||||||||||| ||||||||||||
Sbjct: 141924 gcaatgcacacaccataacaaaca 141901
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>emb|BX284692.14| Zebrafish DNA sequence from clone CH211-282O22 in linkage group 17,
             complete sequence
          Length = 162970

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     aaaaagtgctcttttattga 27
             ||||||||||||||||||||
Sbjct: 67407 aaaaagtgctcttttattga 67388
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>gb|AC156278.8| Mus musculus 6 BAC RP24-249N9 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 162919

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 96    catatacacacaccaatacaaaca 119
             ||||||||||||| ||||||||||
Sbjct: 95456 catatacacacacaaatacaaaca 95479
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>emb|BX572078.5| Zebrafish DNA sequence from clone DKEY-77G12 in linkage group 14,
             complete sequence
          Length = 217034

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     aaaaagtgctcttttattga 27
             ||||||||||||||||||||
Sbjct: 35423 aaaaagtgctcttttattga 35442
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>gb|AC102477.18| Mus musculus chromosome 5, clone RP24-405C17, complete sequence
          Length = 179495

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 96     catatacacacaccaatacaaaca 119
              ||||||||||||| ||||||||||
Sbjct: 135378 catatacacacacaaatacaaaca 135355



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 96     catatacacacaccaatacaaaca 119
              ||||||||||||| ||||||||||
Sbjct: 110892 catatacacacacaaatacaaaca 110869
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>gb|AC153927.6| Mus musculus 6 BAC RP23-74G1 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 211584

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 227    tacccacaaagaggtaaggg 246
              ||||||||||||||||||||
Sbjct: 206526 tacccacaaagaggtaaggg 206507
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 126     ccaagaagaagaacgtacacaaca 149
               |||| |||||||||||||||||||
Sbjct: 8904802 ccaacaagaagaacgtacacaaca 8904779
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 317      aaaatgacgcctccaagaaggtgaatgatgcc 348
                ||||||||||||||||| ||| ||| ||||||
Sbjct: 28245266 aaaatgacgcctccaaggaggggaacgatgcc 28245297
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>gb|AC009486.4| Homo sapiens BAC clone RP11-333O1 from 2, complete sequence
          Length = 203718

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 189    catggcaatgcacactccat 208
              ||||||||||||||||||||
Sbjct: 120822 catggcaatgcacactccat 120841
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>dbj|AP005801.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0045M11
          Length = 159148

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 126   ccaagaagaagaacgtacacaaca 149
             |||| |||||||||||||||||||
Sbjct: 65109 ccaacaagaagaacgtacacaaca 65086
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>dbj|AP004096.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1743_B12
          Length = 175645

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 317   aaaatgacgcctccaagaaggtgaatgatgcc 348
             ||||||||||||||||| ||| ||| ||||||
Sbjct: 37023 aaaatgacgcctccaaggaggggaacgatgcc 37054
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>emb|BX005313.4| Zebrafish DNA sequence from clone CH211-119C24, complete sequence
          Length = 173719

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     aaaaagtgctcttttattga 27
             ||||||||||||||||||||
Sbjct: 38248 aaaaagtgctcttttattga 38229
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>gb|AC132387.4| Mus musculus BAC clone RP23-440M14 from 1, complete sequence
          Length = 193449

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 346   gcccatccatcttttaatgc 365
             ||||||||||||||||||||
Sbjct: 24497 gcccatccatcttttaatgc 24478
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>emb|CR812482.14| Zebrafish DNA sequence from clone CH211-157N19 in linkage group 1,
              complete sequence
          Length = 179573

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      aaaagtgctcttttattgaa 28
              ||||||||||||||||||||
Sbjct: 110146 aaaagtgctcttttattgaa 110127
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>gb|AC131987.10| Mus musculus chromosome 13, clone RP24-184L10, complete sequence
          Length = 174529

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 114    caaacagaaaagccaagaagaaga 137
              |||||||||||||||| |||||||
Sbjct: 154849 caaacagaaaagccaacaagaaga 154826
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>gb|AC110885.14| Mus musculus chromosome 7, clone RP24-342P18, complete sequence
          Length = 223826

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 201    cactccataacaaacaggtt 220
              ||||||||||||||||||||
Sbjct: 118325 cactccataacaaacaggtt 118344
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>emb|BX088567.6| Mouse DNA sequence from clone RP23-21L20 on chromosome X, complete
            sequence
          Length = 150122

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 330  caagaaggtgaatgatgccc 349
            ||||||||||||||||||||
Sbjct: 8577 caagaaggtgaatgatgccc 8596
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>emb|AL732494.16| Mouse DNA sequence from clone RP23-322L22 on chromosome 4, complete
             sequence
          Length = 109450

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 101   acacacaccaatacaaacagaaaa 124
             ||||||||||||||| ||||||||
Sbjct: 79124 acacacaccaatacacacagaaaa 79147
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 319     aatgacgcctccaagaaggt 338
               ||||||||||||||||||||
Sbjct: 3130154 aatgacgcctccaagaaggt 3130135
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>dbj|AP004579.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT11E23, TM0557
          Length = 87695

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   acaaacagaaaagccaagaa 132
             ||||||||||||||||||||
Sbjct: 55992 acaaacagaaaagccaagaa 55973
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>dbj|AP004576.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01N11, TM0177,
              complete sequence
          Length = 133589

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 113    acaaacagaaaagccaagaa 132
              ||||||||||||||||||||
Sbjct: 129017 acaaacagaaaagccaagaa 129036
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>gb|AC155302.2| Mus musculus BAC clone RP24-227A11 from chromosome 13, complete
             sequence
          Length = 152447

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 114   caaacagaaaagccaagaagaaga 137
             |||||||||||||||| |||||||
Sbjct: 12140 caaacagaaaagccaacaagaaga 12117
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>emb|AL845170.5| Mouse DNA sequence from clone RP23-282A22 on chromosome 2, complete
             sequence
          Length = 183985

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   agaaaagccaagaagaagaa 138
             ||||||||||||||||||||
Sbjct: 55736 agaaaagccaagaagaagaa 55755


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,169,801
Number of Sequences: 3902068
Number of extensions: 5169801
Number of successful extensions: 88326
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88069
Number of HSP's gapped (non-prelim): 257
length of query: 412
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 390
effective length of database: 17,147,199,772
effective search space: 6687407911080
effective search space used: 6687407911080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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