Clone Name | rbastl12c01 |
---|---|
Clone Library Name | barley_pub |
>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2) (Protein VASCULAR HIGHWAY 1) Length = 1143 Score = 33.9 bits (76), Expect = 0.15 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 3/50 (6%) Frame = -2 Query: 396 EDQKTAGGTVSWELLA---LGMRCTADAPHERPDMPDVLAALLDIAGAAN 256 E + GG + E+L + +RC D P +RP+M V+A+L ++ G+ N Sbjct: 1085 EKEGFEGGVIVKEMLRYLEIALRCVDDFPSKRPNMLQVVASLRELRGSEN 1134
>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor| (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS MICROSPOROCYTES1 protein) Length = 1192 Score = 32.3 bits (72), Expect = 0.44 Identities = 15/29 (51%), Positives = 20/29 (68%) Frame = -2 Query: 357 LLALGMRCTADAPHERPDMPDVLAALLDI 271 LL + M C A+ P +RP+M DVL AL +I Sbjct: 1164 LLQIAMLCLAETPAKRPNMLDVLKALKEI 1192
>MUTL_XYLFA (Q9PFB8) DNA mismatch repair protein mutL| Length = 619 Score = 30.4 bits (67), Expect = 1.7 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = -1 Query: 190 EIGVHSRLQETKFITGNKIHSFVYKNAVA*LSLTSIGT 77 ++ VH QE +F IH FVY+ L+ T GT Sbjct: 296 DVNVHPAKQEVRFRDARLIHDFVYRTVQGTLAQTRAGT 333
>KIN31_CAEEL (P34265) Probable tyrosine-protein kinase kin-31 (EC 2.7.10.2)| Length = 437 Score = 30.0 bits (66), Expect = 2.2 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -2 Query: 360 ELLALGMRCTADAPHERPDMPDVLAALLDIAG 265 E+ AL RC A+ P++RP M DV L + G Sbjct: 350 EVQALMTRCCAENPNDRPTMSDVAQILQRVTG 381
>BORL3_ARATH (Q9SSG5) Putative boron transporter-like protein 3| Length = 683 Score = 29.3 bits (64), Expect = 3.7 Identities = 13/50 (26%), Positives = 27/50 (54%) Frame = -3 Query: 158 KIHYRKQNSFLRVQKCGCLVEPDVHWNQGRAHVRNVGRSKDKKQSFW*KK 9 ++ +R NS VQ+C + ++ ++G VR +G ++DK + K+ Sbjct: 620 ELSFRSNNSARGVQECDAEILDELTTSRGELKVRTLGHNEDKGHQIYPKE 669
>CJ095_HUMAN (Q9H7T3) Protein C10orf95| Length = 257 Score = 29.3 bits (64), Expect = 3.7 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -3 Query: 389 KRRPAARCPGSCWRWACGARPTRLTSGR 306 +RR A P + W ACGA PT T+ + Sbjct: 215 RRRRACSSPTTAWSGACGAGPTAATAAQ 242
>XDH_DROSU (P91711) Xanthine dehydrogenase (EC 1.17.1.4) (XD) (Protein rosy| locus) Length = 1344 Score = 28.9 bits (63), Expect = 4.9 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Frame = -3 Query: 185 RCPFKVTGDKIHYRKQNSFLRVQKC--GCLVEPDVHWNQGRAHVRNVGRSKDKKQSFW*K 12 R F TGD HY +Q +++C CL Q R H R +K +++ W K Sbjct: 957 RLNFYRTGDTTHYNQQLEHFPIERCLDDCL-------TQSRYHERRAEIAKFNRENRWRK 1009 Query: 11 K 9 + Sbjct: 1010 R 1010
>DAX1_PIG (P79386) Nuclear receptor 0B1 (Nuclear receptor DAX-1)| Length = 471 Score = 28.9 bits (63), Expect = 4.9 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -3 Query: 389 KRRPAARCPGSCWRWACGARP 327 + P AR GSCW +CG+ P Sbjct: 27 REAPEARLRGSCWGCSCGSEP 47
>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)| Length = 999 Score = 28.5 bits (62), Expect = 6.4 Identities = 11/33 (33%), Positives = 21/33 (63%) Frame = -2 Query: 360 ELLALGMRCTADAPHERPDMPDVLAALLDIAGA 262 +++ +G+ CT+ P RP M V+ L +++GA Sbjct: 938 KVIHIGLLCTSPLPLNRPSMRKVVIMLQEVSGA 970
>MUTL_XYLFT (Q87AC9) DNA mismatch repair protein mutL| Length = 619 Score = 28.5 bits (62), Expect = 6.4 Identities = 13/38 (34%), Positives = 18/38 (47%) Frame = -1 Query: 190 EIGVHSRLQETKFITGNKIHSFVYKNAVA*LSLTSIGT 77 ++ VH E +F IH FVY+ L+ T GT Sbjct: 296 DVNVHPAKHEVRFRDARLIHDFVYRTVQGTLAQTRAGT 333
>KAND_SCHPO (Q10078) Putative serine/threonine-protein kinase C3H1.13 (EC| 2.7.11.1) Length = 344 Score = 28.5 bits (62), Expect = 6.4 Identities = 11/34 (32%), Positives = 20/34 (58%) Frame = +2 Query: 26 FASCLCSYLRYVHAPCPGSNGRQAQLSNRIFVHE 127 + SCLC L+Y+H G + +Q ++++ I E Sbjct: 142 WCSCLCKALQYLHENVAGDSPKQPEVNDLIMFDE 175 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,722,605 Number of Sequences: 219361 Number of extensions: 872313 Number of successful extensions: 2462 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 2403 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2461 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)