ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl12b09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_473146.1| Oryza sativa (japonica cultivar-group), predic... 66 8e-08
2emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4,... 66 8e-08
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 66 8e-08
4dbj|AK102761.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 8e-08
5emb|CR550303.18| Mouse DNA sequence from clone RP24-87D8 on chro... 46 0.071
6emb|CR847872.2| Mouse DNA sequence from clone RP24-260B21 on chr... 46 0.071
7emb|BX950196.7| Mouse DNA sequence from clone RP23-287E8 on chro... 46 0.071
8emb|BX001066.14| Mouse DNA sequence from clone RP23-463P1 on chr... 46 0.071
9emb|AL772344.4| Mouse DNA sequence from clone RP23-235J15 on chr... 46 0.071
10emb|AL772327.4| Mouse DNA sequence from clone RP23-241B2 on chro... 46 0.071
11ref|XM_635558.1| Dictyostelium discoideum hypothetical protein (... 44 0.28
12emb|AL807803.6| Mouse DNA sequence from clone RP23-96B14 on chro... 44 0.28
13ref|NM_001003343.1| Canis familiaris dystrophin (muscular dystro... 42 1.1
14gb|AF070485.1| Canis familiaris dystrophin mRNA, complete cds 42 1.1
15ref|XM_850502.1| PREDICTED: Canis familiaris hypothetical protei... 42 1.1
16gb|AC121802.3| Mus musculus BAC clone RP23-434N18 from chromosom... 42 1.1
17gb|AF192292.1| Aplysia juliana 16S ribosomal RNA gene, partial s... 42 1.1
18emb|CR524055.1| Gallus gallus finished cDNA, clone ChEST1017k6 42 1.1
19dbj|AB154695.1| Drosophila lini gene for suppressor of forked, p... 42 1.1
20emb|CR931669.1| Streptococcus pneumoniae strain nr. 4704 (seroty... 42 1.1
21gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 4.4
22gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 40 4.4
23ref|XM_955025.1| Neurospora crassa OR74A hypothetical protein (N... 40 4.4
24gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 40 4.4
25ref|XM_330428.1| Neurospora crassa OR74A hypothetical protein (N... 40 4.4
26gb|AY599563.1| Homo sapiens replication protein A1, 70kDa (RPA1)... 40 4.4
27gb|AC137512.2| Mus musculus chromosome 12 clone RP24-323C12, com... 40 4.4
28gb|CP000001.1| Bacillus cereus E33L, complete genome 40 4.4
29emb|BX322784.3| Human DNA sequence from clone RP11-3D23 on chrom... 40 4.4
30emb|AL354991.11| Human DNA sequence from clone RP11-480F4 on chr... 40 4.4
31emb|AL121782.9|HSJ585I14 Human DNA sequence from clone RP4-585I1... 40 4.4
32gb|AC144535.4| Homo sapiens 12 BAC RP11-191K23 (Roswell Park Can... 40 4.4
33gb|AC116616.5| Homo sapiens BAC clone RP11-51M24 from 4, complet... 40 4.4
34gb|AC130689.8| Homo sapiens chromosome 17, clone CTD-2548O19, co... 40 4.4
35ref|XM_218515.3| PREDICTED: Rattus norvegicus zinc finger protei... 40 4.4
36gb|AC099684.7| Homo sapiens chromosome 17, clone CTD-2545H1, com... 40 4.4
37gb|AC074362.5| Homo sapiens BAC clone RP11-1C10 from 2, complete... 40 4.4
38gb|AC006427.13|AC006427 Homo sapiens chromosome 4 clone C0201M04... 40 4.4
39gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 40 4.4
40gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 40 4.4
41gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 40 4.4 
>ref|XM_473146.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1398

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 275  cctctctgtatttgcttgttgtgttggggattccattagatcctgaatc 323
            ||||||||||||||||||| || |||||||||||||| | |||||||||
Sbjct: 1357 cctctctgtatttgcttgtcgtattggggattccattggttcctgaatc 1309
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>emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0004N05,
             complete sequence
          Length = 158601

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                              
Query: 275   cctctctgtatttgcttgttgtgttggggattccattagatcctgaatc 323
             ||||||||||||||||||| || |||||||||||||| | |||||||||
Sbjct: 40877 cctctctgtatttgcttgtcgtattggggattccattggttcctgaatc 40925



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                      
Query: 200   ctcatgcagagtacttctgcagagctctatccagcctgacatcaaagggagtcgagt 256
             ||||||||||| | |||| ||| |||||||||||||||||||  |||||||| ||||
Sbjct: 40727 ctcatgcagaggatttcttcagtgctctatccagcctgacattgaagggagttgagt 40783
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                                 
Query: 275      cctctctgtatttgcttgttgtgttggggattccattagatcctgaatc 323
                ||||||||||||||||||| || |||||||||||||| | |||||||||
Sbjct: 25554680 cctctctgtatttgcttgtcgtattggggattccattggttcctgaatc 25554728



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                         
Query: 200      ctcatgcagagtacttctgcagagctctatccagcctgacatcaaagggagtcgagt 256
                ||||||||||| | |||| ||| |||||||||||||||||||  |||||||| ||||
Sbjct: 25554530 ctcatgcagaggatttcttcagtgctctatccagcctgacattgaagggagttgagt 25554586
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>dbj|AK102761.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107C20, full
            insert sequence
          Length = 1657

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 275  cctctctgtatttgcttgttgtgttggggattccattagatcctgaatc 323
            ||||||||||||||||||| || |||||||||||||| | |||||||||
Sbjct: 1356 cctctctgtatttgcttgtcgtattggggattccattggttcctgaatc 1308



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                     
Query: 200  ctcatgcagagtacttctgcagagctctatccagcctgacatcaaagggagtcgagt 256
            ||||||||||| | |||| ||| |||||||||||||||||||  |||||||| ||||
Sbjct: 1506 ctcatgcagaggatttcttcagtgctctatccagcctgacattgaagggagttgagt 1450
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>emb|CR550303.18| Mouse DNA sequence from clone RP24-87D8 on chromosome 4, complete
              sequence
          Length = 194565

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 265    agttttctatcctctctgtattt 287
              |||||||||||||||||||||||
Sbjct: 157754 agttttctatcctctctgtattt 157776



 Score = 46.1 bits (23), Expect = 0.071
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 265   agttttctatcctctctgtattt 287
             |||||||||||||||||||||||
Sbjct: 81836 agttttctatcctctctgtattt 81858
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>emb|CR847872.2| Mouse DNA sequence from clone RP24-260B21 on chromosome 4, complete
             sequence
          Length = 59848

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 265   agttttctatcctctctgtattt 287
             |||||||||||||||||||||||
Sbjct: 44200 agttttctatcctctctgtattt 44222
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>emb|BX950196.7| Mouse DNA sequence from clone RP23-287E8 on chromosome 4, complete
              sequence
          Length = 170778

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 265    agttttctatcctctctgtattt 287
              |||||||||||||||||||||||
Sbjct: 101722 agttttctatcctctctgtattt 101700



 Score = 46.1 bits (23), Expect = 0.071
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 265   agttttctatcctctctgtattt 287
             |||||||||||||||||||||||
Sbjct: 21560 agttttctatcctctctgtattt 21538
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>emb|BX001066.14| Mouse DNA sequence from clone RP23-463P1 on chromosome 4, complete
              sequence
          Length = 195216

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 265    agttttctatcctctctgtattt 287
              |||||||||||||||||||||||
Sbjct: 129351 agttttctatcctctctgtattt 129373
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>emb|AL772344.4| Mouse DNA sequence from clone RP23-235J15 on chromosome 4, complete
             sequence
          Length = 223771

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 265   agttttctatcctctctgtattt 287
             |||||||||||||||||||||||
Sbjct: 65376 agttttctatcctctctgtattt 65398
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>emb|AL772327.4| Mouse DNA sequence from clone RP23-241B2 on chromosome 4, complete
              sequence
          Length = 222631

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 265    agttttctatcctctctgtattt 287
              |||||||||||||||||||||||
Sbjct: 176929 agttttctatcctctctgtattt 176907



 Score = 46.1 bits (23), Expect = 0.071
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 265    agttttctatcctctctgtattt 287
              |||||||||||||||||||||||
Sbjct: 107594 agttttctatcctctctgtattt 107572



 Score = 46.1 bits (23), Expect = 0.071
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 265   agttttctatcctctctgtattt 287
             |||||||||||||||||||||||
Sbjct: 24743 agttttctatcctctctgtattt 24721
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>ref|XM_635558.1| Dictyostelium discoideum hypothetical protein (DDB0205553),
          partial mRNA
          Length = 414

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 65 ccatttcaatgtacacaaaattcagt 90
          |||||||||| |||||||||||||||
Sbjct: 11 ccatttcaatttacacaaaattcagt 36
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>emb|AL807803.6| Mouse DNA sequence from clone RP23-96B14 on chromosome X, complete
              sequence
          Length = 177011

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 265    agttttctatcctctctgtatt 286
              ||||||||||||||||||||||
Sbjct: 115678 agttttctatcctctctgtatt 115657
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>ref|NM_001003343.1| Canis familiaris dystrophin (muscular dystrophy, Duchenne and Becker
             types) (DMD), mRNA
          Length = 13887

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 158   atcagaagacatttttaactc 178
             |||||||||||||||||||||
Sbjct: 12413 atcagaagacatttttaactc 12433
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>gb|AF070485.1| Canis familiaris dystrophin mRNA, complete cds
          Length = 13887

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 158   atcagaagacatttttaactc 178
             |||||||||||||||||||||
Sbjct: 12413 atcagaagacatttttaactc 12433
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>ref|XM_850502.1| PREDICTED: Canis familiaris hypothetical protein LOC606758 (LOC606758),
             mRNA
          Length = 13507

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 158   atcagaagacatttttaactc 178
             |||||||||||||||||||||
Sbjct: 12033 atcagaagacatttttaactc 12053
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>gb|AC121802.3| Mus musculus BAC clone RP23-434N18 from chromosome 18, complete
             sequence
          Length = 187787

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 281   tgtatttgcttgttgtgttgg 301
             |||||||||||||||||||||
Sbjct: 66309 tgtatttgcttgttgtgttgg 66329
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>gb|AF192292.1| Aplysia juliana 16S ribosomal RNA gene, partial sequence;
           mitochondrial gene for mitochondrial product
          Length = 420

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 161 agaagacatttttaactcttc 181
           |||||||||||||||||||||
Sbjct: 248 agaagacatttttaactcttc 268
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>emb|CR524055.1| Gallus gallus finished cDNA, clone ChEST1017k6
          Length = 910

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 219 cagagctctatccagcctgac 239
           |||||||||||||||||||||
Sbjct: 711 cagagctctatccagcctgac 731
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>dbj|AB154695.1| Drosophila lini gene for suppressor of forked, partial cds,
           isolate:DliniSuf
          Length = 400

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 59  gcatctccatttcaatgtaca 79
           |||||||||||||||||||||
Sbjct: 127 gcatctccatttcaatgtaca 107
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>emb|CR931669.1| Streptococcus pneumoniae strain nr. 4704 (serotype 17a)
          Length = 23198

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 19   tttttcttgaacttctgtatc 39
            |||||||||||||||||||||
Sbjct: 9534 tttttcttgaacttctgtatc 9514
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>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 168     atttttaactcttcaactttagta 191
               ||||||||||| ||||||||||||
Sbjct: 1084775 atttttaactcatcaactttagta 1084798
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>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 168     atttttaactcttcaactttagta 191
               ||||||||||| ||||||||||||
Sbjct: 1055849 atttttaactcatcaactttagta 1055872
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>ref|XM_955025.1| Neurospora crassa OR74A hypothetical protein (NCU09779.1) partial
           mRNA
          Length = 1101

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 54  aacatgcatctccatttcaa 73
           ||||||||||||||||||||
Sbjct: 400 aacatgcatctccatttcaa 419
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>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 168     atttttaactcttcaactttagta 191
               ||||||||||| ||||||||||||
Sbjct: 1055742 atttttaactcatcaactttagta 1055765
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>ref|XM_330428.1| Neurospora crassa OR74A hypothetical protein (NCU09779.1) partial
           mRNA
          Length = 1101

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 54  aacatgcatctccatttcaa 73
           ||||||||||||||||||||
Sbjct: 400 aacatgcatctccatttcaa 419
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>gb|AY599563.1| Homo sapiens replication protein A1, 70kDa (RPA1) gene, complete cds
          Length = 71105

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    cttctgtatcaggcatagga 49
             ||||||||||||||||||||
Sbjct: 53719 cttctgtatcaggcatagga 53738
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>gb|AC137512.2| Mus musculus chromosome 12 clone RP24-323C12, complete sequence
          Length = 164776

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    atttcaatgtacacaaaatt 86
             ||||||||||||||||||||
Sbjct: 14835 atttcaatgtacacaaaatt 14816
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 168     atttttaactcttcaactttagta 191
               ||||||||||| ||||||||||||
Sbjct: 1096562 atttttaactcatcaactttagta 1096585
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>emb|BX322784.3| Human DNA sequence from clone RP11-3D23 on chromosome X Contains a
             Sjogren syndrome antigen B (autoantigen La) (SSB)
             pseudogene, complete sequence
          Length = 169147

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 156   caatcagaagacatttttaactct 179
             ||||||||||| ||||||||||||
Sbjct: 12053 caatcagaagaaatttttaactct 12030
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>emb|AL354991.11| Human DNA sequence from clone RP11-480F4 on chromosome 9 Contains
            part of the PRKWNK2 gene for protein kinase, lysine
            deficient 2 (WNK2, NY-CO-43, SDCCAG43, P/OKcl.13),
            complete sequence
          Length = 36944

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 292  gttgtgttggggattccatt 311
            ||||||||||||||||||||
Sbjct: 6438 gttgtgttggggattccatt 6419
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>emb|AL121782.9|HSJ585I14 Human DNA sequence from clone RP4-585I14 on chromosome 20 Contains the 3'
              end of the C20orf13 gene for chromosome 20 open reading
              frame 13 and the GAPDP2 gene for glyceraldehyde-3-phosphate
              dehydrogenase pseudogene 2, complete sequence
          Length = 144781

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      acaaacaagcaatttttctt 26
              ||||||||||||||||||||
Sbjct: 118962 acaaacaagcaatttttctt 118943
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>gb|AC144535.4| Homo sapiens 12 BAC RP11-191K23 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 156422

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 156   caatcagaagacatttttaactct 179
             |||||||||||||| |||||||||
Sbjct: 58002 caatcagaagacatgtttaactct 58025
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>gb|AC116616.5| Homo sapiens BAC clone RP11-51M24 from 4, complete sequence
          Length = 94560

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 308   cattagatcctgaatcaatt 327
             ||||||||||||||||||||
Sbjct: 68487 cattagatcctgaatcaatt 68468
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>gb|AC130689.8| Homo sapiens chromosome 17, clone CTD-2548O19, complete sequence
          Length = 202269

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    cttctgtatcaggcatagga 49
             ||||||||||||||||||||
Sbjct: 69304 cttctgtatcaggcatagga 69285
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>ref|XM_218515.3| PREDICTED: Rattus norvegicus zinc finger protein 507 (predicted)
           (Znf507_predicted), mRNA
          Length = 3041

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 154 cccaatcagaagacattttt 173
           ||||||||||||||||||||
Sbjct: 428 cccaatcagaagacattttt 409
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>gb|AC099684.7| Homo sapiens chromosome 17, clone CTD-2545H1, complete sequence
          Length = 166138

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    cttctgtatcaggcatagga 49
             ||||||||||||||||||||
Sbjct: 17588 cttctgtatcaggcatagga 17607
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>gb|AC074362.5| Homo sapiens BAC clone RP11-1C10 from 2, complete sequence
          Length = 149705

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 214   ttctgcagagctctatccag 233
             ||||||||||||||||||||
Sbjct: 99463 ttctgcagagctctatccag 99444
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>gb|AC006427.13|AC006427 Homo sapiens chromosome 4 clone C0201M04, complete sequence
          Length = 178524

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   gtatttgcttgttgtgttgg 301
             ||||||||||||||||||||
Sbjct: 90295 gtatttgcttgttgtgttgg 90276
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>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 168     atttttaactcttcaactttagta 191
               ||||||||||| ||||||||||||
Sbjct: 1057200 atttttaactcatcaactttagta 1057223
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>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 168     atttttaactcttcaactttagta 191
               ||||||||||| ||||||||||||
Sbjct: 1055849 atttttaactcatcaactttagta 1055872
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>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 168     atttttaactcttcaactttagta 191
               ||||||||||| ||||||||||||
Sbjct: 1181919 atttttaactcatcaactttagta 1181942


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,718,117
Number of Sequences: 3902068
Number of extensions: 3718117
Number of successful extensions: 74668
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74385
Number of HSP's gapped (non-prelim): 283
length of query: 333
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 311
effective length of database: 17,147,199,772
effective search space: 5332779129092
effective search space used: 5332779129092
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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