>K125_TOBAC (O23826) 125 kDa kinesin-related protein|
          Length = 1006

 Score = 60.1 bits (144), Expect = 1e-09
 Identities = 31/47 (65%), Positives = 38/47 (80%), Gaps = 2/47 (4%)
 Frame = -1

Query: 362  KGTIESLRAMPIESLMDEFRENHPYES--SKEPKPSLIPRSPLATLN 228
            K TIESLRAMP+E L++EFREN+ +ES   KE KPSLIPRSP + +N
Sbjct: 959  KVTIESLRAMPMEVLLEEFRENNSFESFQVKEVKPSLIPRSPFSQIN 1005

>K125_ARATH (P82266) Probable 125 kDa kinesin-related protein|
          Length = 1056

 Score = 58.5 bits (140), Expect = 4e-09
 Identities = 30/46 (65%), Positives = 37/46 (80%), Gaps = 2/46 (4%)
 Frame = -1

Query: 362  KGTIESLRAMPIESLMDEFRENHPYES--SKEPKPSLIPRSPLATL 231
            K TIESLRAMPIE+L++EFREN+ YES  +KE KP  + RSPL+ L
Sbjct: 963  KATIESLRAMPIETLVEEFRENNSYESFATKETKPQQLTRSPLSQL 1008

>EAA3_CAEEL (Q21353) Putative sodium-dependent excitatory amino acid|
           transporter glt-3
          Length = 532

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 11/37 (29%)
 Frame = +3

Query: 246 RARDERRLG-----------FLARFIGMVLTELIHQG 323
           RARD RR+G           FLA F G++L   IH G
Sbjct: 70  RARDARRIGIVTIIYYMITTFLATFTGIILVSSIHPG 106

>PHF2_HUMAN (O75151) PHD finger protein 2 (GRC5)|
          Length = 1101

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -1

Query: 344 LRAMPIESLMDEFRENHPYESSKEPKPSLIPRSP 243
           + A P +SL+++  +    ++ K PKPS IP+ P
Sbjct: 476 IEATPPQSLLEKVSKKKTPKTVKMPKPSKIPKPP 509

>PALA_SCHPO (Q09807) pH-response regulator protein palA/rim20|
          Length = 701

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 12/42 (28%), Positives = 28/42 (66%), Gaps = 6/42 (14%)
 Frame = +2

Query: 2   IHSSRNAKDTRHRIFYKNIRRLHNKL------IHSSKNAKDT 109
           I+S +++++ + + FY ++ +LH ++      + +S+NAKDT
Sbjct: 450 INSVKSSQNMKEKGFYSDVIKLHEEVSLLKVNVENSQNAKDT 491

>YFGJ_ECOLI (P76575) Hypothetical protein yfgJ|
          Length = 83

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
 Frame = -1

Query: 206 LFCVQCNLIRTSNRCWL*CPCCARFYGMLALI-QCLLHSC*NVSICCGAAEYSCK 45
           L C QC  +   +     C  C  F  M AL   C  H    V   CGA +Y C+
Sbjct: 15  LHCPQCQHVLDQDNGHARCRSCGEFIEMKALCPDC--HQPLQVLKACGAVDYFCQ 67

>YBV8_YEAST (P38266) Protein YBR108W|
          Length = 947

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -1

Query: 350 ESLRAMPIESLMDEFRENHPYESSKEPKPSLIPRS 246
           ++ +A P+E +  E    HP E  +  +PSL+P+S
Sbjct: 603 QNSKASPVE-MKGEVLPGHPSEEDRNVEPSLVPQS 636

>ATM_ARATH (Q9M3G7) Serine/threonine-protein kinase ATM (EC 2.7.11.1) (Ataxia|
            telangiectasia mutated homolog) (AtATM)
          Length = 3856

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +2

Query: 11   SRNAKDTRHRIFYKNIRRLHNKLIHSSKNAKDTG*GLASHKTWHNKD 151
            SR +     R   ++++ LHNKLI S  + +DT  G  +   W + D
Sbjct: 2363 SRRSNYLPPRFLSRSLQALHNKLIASEVSQEDTN-GETAETFWQSDD 2408


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,139,524
Number of Sequences: 219361
Number of extensions: 910103
Number of successful extensions: 2442
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2439
length of database: 80,573,946
effective HSP length: 96
effective length of database: 59,515,290
effective search space used: 1428366960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)