>emb|CR388019.9| Zebrafish DNA sequence from clone DKEY-71D15 in linkage group 21,
             complete sequence
          Length = 68996

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 152   atctgtgcaccaaaatgtgccaa 174
             |||||||||||||||||||||||
Sbjct: 42900 atctgtgcaccaaaatgtgccaa 42878

>emb|AL035088.1|HS3D11 Human DNA sequence from clone RP1-3D11 on chromosome Xq22.1-23 Contains
             a pseudogene similar to part of  keratin 18 (K18, CYK18)
             (KRT18), a novel gene, the 5' end of a novel gene and two
             CpG islands, complete sequence
          Length = 146358

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 13    gctactgtatttgttttgctg 33
             |||||||||||||||||||||
Sbjct: 87729 gctactgtatttgttttgctg 87709

>gb|AC166325.1| Mus musculus BAC clone RP24-421O23 from chromosome 13, complete
             sequence
          Length = 192167

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 265   aaacacaatgttaccaccatg 285
             |||||||||||||||||||||
Sbjct: 56882 aaacacaatgttaccaccatg 56902

>gb|AC154603.3| Mus musculus BAC clone RP23-344D21 from chromosome 13, complete
            sequence
          Length = 216297

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 265  aaacacaatgttaccaccatg 285
            |||||||||||||||||||||
Sbjct: 2001 aaacacaatgttaccaccatg 1981

>gb|AC132262.2| Mus musculus chromosome 5 clone RP24-370J24, complete sequence
          Length = 176466

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   aattcagatcaaaacaacct 198
             ||||||||||||||||||||
Sbjct: 56341 aattcagatcaaaacaacct 56322

>gb|AC114512.5| Rattus norvegicus 5 BAC CH230-5N9 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 247588

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 153    tctgtgcaccaaaatgtgcc 172
              ||||||||||||||||||||
Sbjct: 108417 tctgtgcaccaaaatgtgcc 108398

>gb|AC122221.4| Mus musculus BAC clone RP23-128B1 from chromosome 5, complete
            sequence
          Length = 216207

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 179  aattcagatcaaaacaacct 198
            ||||||||||||||||||||
Sbjct: 3519 aattcagatcaaaacaacct 3538

>emb|CR932628.1|CNS0KYCO Paramecium tetraurelia, Small GTPase rab, putative, complete gene
          Length = 3001

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 73  ctaaaataacaaacttctaa 92
           ||||||||||||||||||||
Sbjct: 957 ctaaaataacaaacttctaa 938

>gb|AC104101.5| Mus musculus BAC clone RP24-377D2 from chromosome 5, complete sequence
          Length = 185414

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 179    aattcagatcaaaacaacct 198
              ||||||||||||||||||||
Sbjct: 132434 aattcagatcaaaacaacct 132453

>gb|AC124346.3| Mus musculus BAC clone RP24-460E12 from chromosome 12, complete sequence
          Length = 203150

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 179    aattcagatcaaaacaacct 198
              ||||||||||||||||||||
Sbjct: 105468 aattcagatcaaaacaacct 105487

>emb|CR392357.6| Zebrafish DNA sequence from clone CH211-196I2 in linkage group 21,
             complete sequence
          Length = 136791

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   ctgcaaaatcatgaatccaa 132
             ||||||||||||||||||||
Sbjct: 45295 ctgcaaaatcatgaatccaa 45314


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,279,272
Number of Sequences: 3902068
Number of extensions: 3279272
Number of successful extensions: 58976
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58960
Number of HSP's gapped (non-prelim): 16
length of query: 338
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 316
effective length of database: 17,147,199,772
effective search space: 5418515127952
effective search space used: 5418515127952
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)