>DEF2_COXBU (Q83AK6) Peptide deformylase 2 (EC 3.5.1.88) (PDF 2) (Polypeptide|
           deformylase 2)
          Length = 209

 Score = 32.7 bits (73), Expect = 0.26
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = -1

Query: 146 IEGCSSIYARFGIGSKEIHLLLSVWVYM*PISAREN*MLQYHKK 15
           IEGC S+  + G+  + +H+ L+ W+Y     A      +YH++
Sbjct: 98  IEGCLSVPGKVGVVERYVHVELTAWLYHSDTEALSKIKREYHRE 141

>SYGA_RICPR (Q9ZCB0) Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)|
           (Glycine--tRNA ligase alpha chain) (GlyRS)
          Length = 289

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 17/44 (38%), Positives = 20/44 (45%)
 Frame = +3

Query: 15  FFMILQHSILPG*NRLHIHPNRQQQVDLLATNTKPSIDR*ASLY 146
           F   +Q S  PG +R  +HPNR Q         KPS D    LY
Sbjct: 52  FIAYVQPSRRPGDSRYGMHPNRMQHYYQFQVILKPSPDNIQDLY 95

>SYGA_RICCN (Q92G10) Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)|
           (Glycine--tRNA ligase alpha chain) (GlyRS)
          Length = 288

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = +3

Query: 27  LQHSILPG*NRLHIHPNRQQQVDLLATNTKPSIDR*ASLY 146
           +Q S  PG +R  +HPNR Q         KPS D    LY
Sbjct: 56  VQPSRRPGDSRYGMHPNRMQHYYQFQVILKPSPDNIQELY 95

>CHK1_YEAST (P38147) Serine/threonine-protein kinase CHK1 (EC 2.7.11.1)|
           (Checkpoint kinase 1)
          Length = 527

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
 Frame = +1

Query: 25  YCNIQFSLAEIGYI-YTQ--TDNNRWISLLPIPNRA*IDEHPSINTSTKTGADLPAAFVD 195
           + +++ SL+   Y+ +TQ    NNR+IS  PI N     EH S++  T +         D
Sbjct: 305 FSHLKVSLSNENYLKFTQDTNSNNRYISTQPIGNELAELEHDSMHFQTVSNTQRAFTSYD 364

Query: 196 SKYPY 210
           S   Y
Sbjct: 365 SNTNY 369


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,164,224
Number of Sequences: 219361
Number of extensions: 657888
Number of successful extensions: 1432
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1432
length of database: 80,573,946
effective HSP length: 51
effective length of database: 69,386,535
effective search space used: 1665276840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)