>TBX4_MOUSE (P70325) T-box transcription factor TBX4 (T-box protein 4)|
          Length = 552

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
 Frame = +1

Query: 100 PPTKEQHTGKQNKTSYLLSSQVFKTKDYQVQYCARRVQVAGH----LPQKIY 243
           P  K + TG   KT Y+L   +    D++ ++C  +  VAG     +P ++Y
Sbjct: 103 PSYKVKVTGMNPKTKYILLIDIVPADDHRYKFCDNKWMVAGKAEPAMPGRLY 154

>ARP6_YEAST (Q12509) Actin-like protein ARP6|
          Length = 438

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = +2

Query: 2   KKRHSLFYYCTDNSVTVLPWVANKTKQNT*SLHPLPRNSTLANKTKHLICFPRKY 166
           K +H+L Y   D   + L +V N  K+N     PLP ++ +   T  L   P  +
Sbjct: 267 KDKHALEYVLPDFQTSFLGYVRNPRKENV----PLPEDAQIITLTDELFTIPETF 317

>TBX4_CANFA (Q861Q9) T-box transcription factor TBX4 (T-box protein 4)|
          Length = 554

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
 Frame = +1

Query: 100 PPTKEQHTGKQNKTSYLLSSQVFKTKDYQVQYCARRVQVAGH----LPQKIY 243
           P  K + TG   KT Y+L   +    D++ ++C  +  VAG     +P ++Y
Sbjct: 105 PSYKVKVTGMNPKTKYILLIDIVPADDHRYKFCDNKWMVAGKAEPAMPGRLY 156

>TBX4_HUMAN (P57082) T-box transcription factor TBX4 (T-box protein 4)|
          Length = 545

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
 Frame = +1

Query: 100 PPTKEQHTGKQNKTSYLLSSQVFKTKDYQVQYCARRVQVAGH----LPQKIY 243
           P  K + TG   KT Y+L   +    D++ ++C  +  VAG     +P ++Y
Sbjct: 98  PSYKVKVTGMNPKTKYILLIDIVPADDHRYKFCDNKWMVAGKAEPAMPGRLY 149

>GYRB_BORBU (P33769) DNA gyrase subunit B (EC 5.99.1.3)|
          Length = 639

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
 Frame = +1

Query: 100 PPTKEQHTGKQN----KTSYLLSSQVFKTKDYQVQYCARRVQVAGHLPQKIY 243
           P +K +  G+ +    K ++L  S++F+T DY      +R++    L  KIY
Sbjct: 152 PTSKVEVVGESSVTGTKVTFLADSEIFETLDYNFDVLEKRLKELAFLNDKIY 203

>TRFR_CHICK (O93603) Thyrotropin-releasing hormone receptor (TRH-R)|
           (Thyroliberin receptor)
          Length = 395

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 16/27 (59%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +1

Query: 112 EQHTG-KQNKTSYLLSSQVFKTKDYQV 189
           E  TG +QN T  LLSSQ F T +YQV
Sbjct: 2   ENGTGDEQNHTGLLLSSQEFVTAEYQV 28

>SEMG2_COLGU (Q5U7M8) Semenogelin-2 precursor (Semenogelin II) (SGII)|
          Length = 582

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 14/46 (30%), Positives = 26/46 (56%)
 Frame = +1

Query: 76  KTKHLIPTPPTKEQHTGKQNKTSYLLSSQVFKTKDYQVQYCARRVQ 213
           K+++ +  P   ++H  K+NK SY  SS    T++ Q+ Y  + +Q
Sbjct: 445 KSQNQVTIPSQDQEHGHKENKISYQSSS----TEERQLNYGGKSIQ 486

>TEGU_EBV (P03186) Large tegument protein|
          Length = 3149

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = +2

Query: 8    RHSLFYYCTDNSVTVLPWVANKTKQNT*SLHPLPRNSTLANKTKHL 145
            R  L+     + ++ +PW   + +++  S+ PLP   T+A K K L
Sbjct: 1066 RELLYLGTALSDMSGIPWPLERVEEDDPSIAPLPEFETVAKKQKEL 1111

>TENX_HUMAN (P22105) Tenascin-X precursor (TN-X) (Hexabrachion-like protein)|
          Length = 4289

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
 Frame = +1

Query: 61   GGKQNKTKHLIPTPPTKEQHTGK---QNKTSYLLSSQVFKTK----DYQVQYCARRVQV 216
            G ++ +T+   PTPP  E H G+   +  TS+ L      T+     +++QY  R  Q+
Sbjct: 1946 GREETETETTAPTPPAPEPHLGELTVEEATSHTLHLSWMVTEGEFDSFEIQYTDRDGQL 2004

>TBX3_CHICK (O73718) T-box transcription factor TBX3 (T-box protein 3)|
           (Fragment)
          Length = 414

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
 Frame = +1

Query: 100 PPTKEQHTGKQNKTSYLLSSQVFKTKDYQVQYCARRVQVAG----HLPQKIY 243
           PP K + TG   K  Y+L   +    D + ++   R  VAG     +P+++Y
Sbjct: 136 PPFKVRCTGLDKKAKYILLMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMY 187

>SNX27_HUMAN (Q96L92) Sorting nexin-27|
          Length = 435

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -3

Query: 183 VVFCFEYLRG-KQIRCFVLFASVLFLGRGCRDQVFC 79
           + FCFEY RG K+ R   +F         C ++VFC
Sbjct: 391 MAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFC 426

>IMMT_MOUSE (Q8CAQ8) Mitochondrial inner membrane protein (Mitofilin)|
          Length = 757

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +1

Query: 130 QNKTSYLLSSQVFKTKDYQVQYCARRVQVAGHLPQKIYQYSHRYL 264
           ++ T  + S +  + + Y VQ  ARRV +       +YQY   YL
Sbjct: 618 ESLTRGVYSEETLRARFYAVQKLARRVAMIDETRNSLYQYFLSYL 662

>IMMT_HUMAN (Q16891) Mitochondrial inner membrane protein (Mitofilin) (p87/89)|
           (Proliferation-inducing gene 4 protein)
          Length = 758

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +1

Query: 130 QNKTSYLLSSQVFKTKDYQVQYCARRVQVAGHLPQKIYQYSHRYL 264
           ++ T  + S +  + + Y VQ  ARRV +       +YQY   YL
Sbjct: 619 ESLTRGVYSEETLRARFYAVQKLARRVAMIDETRNSLYQYFLSYL 663

>ATS15_HUMAN (Q8TE58) ADAMTS-15 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase with thrombospondin motifs 15)
           (ADAM-TS 15) (ADAM-TS15)
          Length = 950

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 22/68 (32%), Positives = 28/68 (41%)
 Frame = +3

Query: 30  ALIIR*QFCHGWQTKQNKTPDPYTPYQGTAHWQTKQNILFAFLASIQNKRLPSPILCKKG 209
           AL +R  FC  WQ K NK  D +  Y  TA   T+Q++  A              +   G
Sbjct: 286 ALTLR-NFC-AWQKKLNKVSDKHPEYWDTAILFTRQDLCGATTCDTLG-------MADVG 336

Query: 210 TSCRPSTS 233
           T C P  S
Sbjct: 337 TMCDPKRS 344


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,979,823
Number of Sequences: 219361
Number of extensions: 823350
Number of successful extensions: 2501
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2501
length of database: 80,573,946
effective HSP length: 68
effective length of database: 65,657,398
effective search space used: 1575777552
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)