Clone Name | rbastl12a05 |
---|---|
Clone Library Name | barley_pub |
>PHOSP_NDVB (P24698) Phosphoprotein (Protein P)| Length = 395 Score = 30.4 bits (67), Expect = 1.2 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +3 Query: 156 TNPTKMLLLLLPKFSEKSMKAQAGQWSPP 242 T + LLL+L K S KS A+ G WS P Sbjct: 111 TGASNSLLLMLDKLSNKSSNAKKGLWSSP 139
>MSA2_PLAFF (P19599) Merozoite surface antigen 2 precursor (MSA-2) (Merozoite| 45 kDa surface antigen) (AG513) Length = 264 Score = 28.9 bits (63), Expect = 3.5 Identities = 21/73 (28%), Positives = 34/73 (46%) Frame = +2 Query: 35 SSVTVTVTLLDAETTSKHAYATHR*G*RRQCKGCFCQITSNQSNQNATPTSAKILGKEHE 214 S+ T T +++TT+ A T G +R T+N +Q TPT+A + Sbjct: 73 SASTSTTNNGESQTTTPTAADTIASGSQRSTNSASTSTTNNGESQTTTPTAA-----DTP 127 Query: 215 STGRAVVPSPLIT 253 + ++ PSP IT Sbjct: 128 TATESISPSPPIT 140
>RNH2_ANASP (Q8YP68) Ribonuclease HII (EC 3.1.26.4) (RNase HII)| Length = 225 Score = 28.5 bits (62), Expect = 4.6 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Frame = +3 Query: 24 KMHYRPSLLLLHY*MLKQQASMLTPRIVKGDDGNVKVASARLPA-TNPTKMLLLLLPKFS 200 K+ +P L L+ Q ML IVKGD+ ++ +A+A + A ++ L K+ Sbjct: 126 KLKLQPILCLIDGNQPVQDLLMLQQTIVKGDERSLNIAAASIMAKVWRDDLIQRLATKYP 185 Query: 201 EKSMKAQAGQWSPPH 245 +K+ G S H Sbjct: 186 MYDLKSNKGYGSKKH 200
>MSA2_PLAFJ (P50499) Merozoite surface antigen 2 precursor (MSA-2)| Length = 264 Score = 28.5 bits (62), Expect = 4.6 Identities = 22/73 (30%), Positives = 34/73 (46%) Frame = +2 Query: 35 SSVTVTVTLLDAETTSKHAYATHR*G*RRQCKGCFCQITSNQSNQNATPTSAKILGKEHE 214 S+ T T +++TT+ A T G +R T+N +Q TPT+A + Sbjct: 73 SASTSTTNNGESQTTTPTAADTIASGSQRSTNSASTSTTNNGESQTTTPTAA-----DTP 127 Query: 215 STGRAVVPSPLIT 253 +T + PSP IT Sbjct: 128 TTTESNSPSPPIT 140
>RP43_RIFPA (Q9NH13) Exoskeleton protein RP43 precursor| Length = 421 Score = 28.1 bits (61), Expect = 6.0 Identities = 8/18 (44%), Positives = 13/18 (72%) Frame = -2 Query: 165 LDWLLVIWQKQPLHCRRH 112 + ++ V WQ P+HCR+H Sbjct: 10 VSFMFVTWQTNPVHCRQH 27
>LBD13_ARATH (Q9AT61) LOB domain protein 13| Length = 268 Score = 28.1 bits (61), Expect = 6.0 Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 6/86 (6%) Frame = +2 Query: 5 D*TYSCQDALSSVTVTVTLLDAETTS------KHAYATHR*G*RRQCKGCFCQITSNQSN 166 D Y C A+S++ + L +E T+ +H Y ITS Q+N Sbjct: 122 DPIYGCMGAISALQHHIQSLQSELTTVRTEILRHKYQEAT------------TITSLQNN 169 Query: 167 QNATPTSAKILGKEHESTGRAVVPSP 244 N+T T++ + +H ++P P Sbjct: 170 FNSTTTTSSVSCDQHALASAILLPPP 195
>MNS1_YEAST (P32906) Endoplasmic reticulum mannosyl-oligosaccharide| 1,2-alpha-mannosidase (EC 3.2.1.113) (ER alpha-1,2-mannosidase) (Man(9)-alpha-mannosidase) Length = 549 Score = 27.7 bits (60), Expect = 7.8 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = +3 Query: 60 Y*MLKQQASMLTPRIVKGDDGNVK 131 Y M KQ +S L P IV +DGN+K Sbjct: 386 YQMYKQSSSGLAPEIVVFNDGNIK 409 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,204,105 Number of Sequences: 219361 Number of extensions: 779453 Number of successful extensions: 1959 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1923 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1959 length of database: 80,573,946 effective HSP length: 72 effective length of database: 64,779,954 effective search space used: 1554718896 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)