ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl12a04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC... 99 2e-21
2LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC... 80 1e-15
3LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC... 47 1e-05
4LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12) 42 3e-04
5LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12) 42 4e-04
6LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12) 40 0.002
7LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase... 40 0.002
8LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13... 40 0.002
9LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precur... 39 0.003
10LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12) 39 0.003
11LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1... 39 0.003
12LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12) 39 0.005
13LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12) 38 0.006
14LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12) 37 0.010
15LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12) 37 0.013
16LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94) 37 0.018
17LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3) 35 0.051
18LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygena... 35 0.067
19LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12) 35 0.067
20LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12) 35 0.067
21LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1) 34 0.11
22LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12) 33 0.19
23LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2) 33 0.19
24LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12) 32 0.43
25UREE_RHOS4 (Q3J156) Urease accessory protein ureE 30 1.6
26LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12) 29 2.8
27ASPA_PROMM (Q7V5L6) Probable aspartoacylase (EC 3.5.1.15) 29 3.6
28Y463_CHRVO (Q7P0V2) UPF0341 protein CV_0463 28 4.8
29LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment) 28 6.2

>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)|
            (LOX-100) (LOX2:Hv:1)
          Length = 936

 Score = 99.4 bits (246), Expect = 2e-21
 Identities = 48/53 (90%), Positives = 48/53 (90%), Gaps = 5/53 (9%)
 Frame = -3

Query: 254  VDEWNNDPDRKNRHGAGMVPYVLLRPS-----DGDPTDEKMVMEMGIPNSISI 111
            VDEWNNDPDRKNRHGAGMVPYVLLRPS     DGDPTDEKMVMEMGIPNSISI
Sbjct: 884  VDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMVMEMGIPNSISI 936



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>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)|
            (LOX2:Hv:2)
          Length = 932

 Score = 80.5 bits (197), Expect = 1e-15
 Identities = 36/48 (75%), Positives = 41/48 (85%)
 Frame = -3

Query: 254  VDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 111
            V+EWN D  R+NRHGAG+VPYVLLRP +G+P D K VMEMGIPNSISI
Sbjct: 885  VEEWNKDDSRRNRHGAGVVPYVLLRPLNGNPMDAKTVMEMGIPNSISI 932



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>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)|
           (LOX2:Hv:3)
          Length = 896

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 26/48 (54%), Positives = 31/48 (64%)
 Frame = -3

Query: 254 VDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 111
           +D  NN+P+ KNR GAG+VPY LL+     P  E  V   GIPNSISI
Sbjct: 854 IDMRNNNPENKNRCGAGIVPYELLK-----PFSEPGVTGRGIPNSISI 896



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>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)|
          Length = 899

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 20/48 (41%), Positives = 30/48 (62%)
 Frame = -3

Query: 254 VDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 111
           ++  N DP R+NR GAG++PY L+ PS G       +   G+PNS++I
Sbjct: 857 IERRNADPSRRNRCGAGVLPYELMAPSSGPG-----ITCRGVPNSVTI 899



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>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)|
          Length = 877

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
 Frame = -3

Query: 254 VDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEK--MVMEMGIPNSISI 111
           + + N +   KNR+G   +PY+LL P+  D T EK   +  MGIPNSISI
Sbjct: 828 IKDMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIPNSISI 877



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>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 862

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = -3

Query: 242 NNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM-VMEMGIPNSISI 111
           N+DP+ KNR+G    PY+LL P+  D       +   GIPNSISI
Sbjct: 818 NHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 862



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>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)|
          Length = 870

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 23/45 (51%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -3

Query: 242 NNDPDRKNRHGAGMVPYVLLRPSDGD-PTDEKMVMEMGIPNSISI 111
           N DP RKNR G    PY LL P+  D   D   +   GIPNSISI
Sbjct: 826 NKDPHRKNRVGPTNFPYTLLYPNTSDLKGDAAGLSARGIPNSISI 870



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>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)|
          Length = 896

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 24/48 (50%), Positives = 29/48 (60%)
 Frame = -3

Query: 254 VDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 111
           +DE N +   KNR GAG+V Y LL+     PT E  V  MG+P SISI
Sbjct: 854 IDERNVNITLKNRAGAGVVKYELLK-----PTSEHGVTGMGVPYSISI 896



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>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC|
            1.13.11.12)
          Length = 941

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = -3

Query: 254  VDEWNNDPDRKNRHGAGMVPYVLLRP-SDGDPTDEKMVMEMGIPNSISI 111
            +D  N D   KNR GAG++PY L++P SD   T       MGIPNS SI
Sbjct: 899  IDGRNKDRKLKNRCGAGILPYQLMKPFSDAGVTG------MGIPNSTSI 941



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>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)|
          Length = 918

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 23/48 (47%), Positives = 28/48 (58%)
 Frame = -3

Query: 254  VDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 111
            ++  N D  RKNR GAG++PY LL PS         V   G+PNSISI
Sbjct: 876  IERRNADHGRKNRCGAGVLPYELLAPS-----SPPGVTCRGVPNSISI 918



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>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)|
          Length = 924

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 22/48 (45%), Positives = 28/48 (58%)
 Frame = -3

Query: 254  VDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 111
            +D  N D   KNR GAG++PY L++     P  +  V  MGIPNS SI
Sbjct: 882  IDGRNKDRKLKNRCGAGILPYQLMK-----PFSDSGVTGMGIPNSTSI 924



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>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 859

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 23/48 (47%), Positives = 27/48 (56%)
 Frame = -3

Query: 254 VDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 111
           +DE N+D   KNR G   +PY LL PS      E  V   GIPNS+SI
Sbjct: 817 IDERNDDETLKNRTGLVKMPYTLLFPS-----SEGGVTGRGIPNSVSI 859



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>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)|
          Length = 866

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -3

Query: 242 NNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM-VMEMGIPNSISI 111
           N D   KNR+G    PY+LL P+  D T     +   GIPNSISI
Sbjct: 822 NGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAAGITAKGIPNSISI 866



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>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)|
          Length = 861

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 21/44 (47%), Positives = 26/44 (59%)
 Frame = -3

Query: 242 NNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 111
           NND   +NRHG   +PY LL PS      ++ +   GIPNSISI
Sbjct: 823 NNDEKLRNRHGPVEMPYTLLYPS-----SKEGLTFRGIPNSISI 861



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>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)|
          Length = 866

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 21/44 (47%), Positives = 26/44 (59%)
 Frame = -3

Query: 242 NNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 111
           NND   +NR+G   +PY LL PS      E+ +   GIPNSISI
Sbjct: 828 NNDESLRNRYGPVKMPYTLLYPS-----SEEGLTCRGIPNSISI 866



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>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)|
          Length = 853

 Score = 36.6 bits (83), Expect = 0.018
 Identities = 21/46 (45%), Positives = 26/46 (56%)
 Frame = -3

Query: 248 EWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 111
           E N D   +NR+G   +PY LL PS      E+ +   GIPNSISI
Sbjct: 813 EKNKDETLRNRYGPAKMPYTLLYPS-----SEEGLTFRGIPNSISI 853



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>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)|
          Length = 857

 Score = 35.0 bits (79), Expect = 0.051
 Identities = 21/48 (43%), Positives = 27/48 (56%)
 Frame = -3

Query: 254 VDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 111
           + E NND   +NR G   +PY LL PS      ++ +   GIPNSISI
Sbjct: 815 LSERNNDEKLRNRCGPVQMPYTLLLPS-----SKEGLTFRGIPNSISI 857



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>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)|
          Length = 863

 Score = 34.7 bits (78), Expect = 0.067
 Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -3

Query: 242 NNDPDRKNRHGAGMVPYVLLRPSDGDPTD-EKMVMEMGIPNSISI 111
           N DP  KNR G    PY L+ P+  D     + +   GIPNSISI
Sbjct: 819 NKDPLLKNRVGPANFPYTLMFPNTSDNKGAAEGITARGIPNSISI 863



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>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)|
          Length = 864

 Score = 34.7 bits (78), Expect = 0.067
 Identities = 20/44 (45%), Positives = 25/44 (56%)
 Frame = -3

Query: 242 NNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 111
           N+DP  +NR G   +PY LL  S      E+ +   GIPNSISI
Sbjct: 826 NSDPSLRNRTGPVQLPYTLLHRS-----SEEGLTFKGIPNSISI 864



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>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)|
          Length = 864

 Score = 34.7 bits (78), Expect = 0.067
 Identities = 20/44 (45%), Positives = 25/44 (56%)
 Frame = -3

Query: 242 NNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 111
           NNDP   +R G   +PY LL PS      ++ +   GIPNSISI
Sbjct: 826 NNDPSLYHRVGPVQLPYTLLHPS-----SKEGLTFRGIPNSISI 864



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>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)|
          Length = 839

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 22/45 (48%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = -3

Query: 242 NNDPDRK-NRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 111
           NNDP  + NR G   +PY LL PS      E+ +   GIPNSISI
Sbjct: 800 NNDPSLQGNRLGPVQLPYTLLYPSS-----EEGLTFRGIPNSISI 839



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>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)|
          Length = 859

 Score = 33.1 bits (74), Expect = 0.19
 Identities = 20/44 (45%), Positives = 24/44 (54%)
 Frame = -3

Query: 242 NNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 111
           N+    KNR G   VPY LL P     T E+ +   GIPNS+SI
Sbjct: 821 NSHKSWKNRSGPVNVPYTLLFP-----TSEEGLTGKGIPNSVSI 859



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>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)|
          Length = 865

 Score = 33.1 bits (74), Expect = 0.19
 Identities = 20/44 (45%), Positives = 22/44 (50%)
 Frame = -3

Query: 242 NNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 111
           NND    NR G   +PY LL P+    T        GIPNSISI
Sbjct: 828 NNDQSLSNRLGPVQLPYTLLHPNSEGLTCR------GIPNSISI 865



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>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 862

 Score = 32.0 bits (71), Expect = 0.43
 Identities = 17/44 (38%), Positives = 26/44 (59%)
 Frame = -3

Query: 242 NNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 111
           N D   +NR+G   +PY +L P+     +++ +   GIPNSISI
Sbjct: 823 NKDSSLRNRNGPVKMPYTVLLPT----CEDEGLTFRGIPNSISI 862



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>UREE_RHOS4 (Q3J156) Urease accessory protein ureE|
          Length = 182

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = -2

Query: 234 PRPEKPTRRRHGAVCAAQAVGR*SHGREDGDGDGHPQQHLHLS 106
           PR E P R   GA    + +G   HG   G G  HP  H+H+S
Sbjct: 128 PRTE-PFRPEGGAYGHGRTLGH-DHGPAQGHGHDHPHVHVHIS 168



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>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 861

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 19/44 (43%), Positives = 21/44 (47%)
 Frame = -3

Query: 242 NNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 111
           N D    NR G    PY LL P     T E  +   GIPNS+SI
Sbjct: 823 NGDNILTNRSGPVNAPYTLLFP-----TSEGGLTGKGIPNSVSI 861



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>ASPA_PROMM (Q7V5L6) Probable aspartoacylase (EC 3.5.1.15)|
          Length = 304

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 254 VDEWNNDPDRKNRHGAGMVPYV 189
           +D+W+  P+  N HG G+VP +
Sbjct: 23  LDQWSQTPELINTHGVGVVPVI 44



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>Y463_CHRVO (Q7P0V2) UPF0341 protein CV_0463|
          Length = 258

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = -2

Query: 231 RPEKPTRRRHGAVCAAQAVGR*SHGREDGDGDGHP 127
           R E  T  +HGAV A    G   H RE G G G P
Sbjct: 45  RLELLTTGKHGAVYAEFVEGAARHRREQGGGRGQP 79



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>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)|
          Length = 741

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -3

Query: 242 NNDPDRKNRHGAGMVPYVLLRPS 174
           NND   +NR G   +PY LL PS
Sbjct: 709 NNDETLRNRTGPAKMPYTLLYPS 731


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,867,810
Number of Sequences: 219361
Number of extensions: 755155
Number of successful extensions: 2222
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2199
length of database: 80,573,946
effective HSP length: 60
effective length of database: 67,412,286
effective search space used: 1617894864
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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