>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 230      tgttccagattccaacagttccattctgaaaattaca 266
                |||||||||||||| ||||||| |||| ||| |||||
Sbjct: 25058521 tgttccagattccagcagttccgttctaaaagttaca 25058485

>gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genomic sequence, complete
             sequence
          Length = 170020

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 230   tgttccagattccaacagttccattctgaaaattaca 266
             |||||||||||||| ||||||| |||| ||| |||||
Sbjct: 90328 tgttccagattccagcagttccgttctaaaagttaca 90292

>gb|AC011225.7|AC011225 Homo sapiens chromosome 18, clone RP11-10L17, complete sequence
          Length = 148835

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 18     agtccatttatttgaatgtat 38
              |||||||||||||||||||||
Sbjct: 134550 agtccatttatttgaatgtat 134530

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 230      tgttccagattccaacagttccattctgaaaattaca 266
                |||||||||||||| ||||||| |||| ||| |||||
Sbjct: 25149830 tgttccagattccagcagttccgttctaaaagttaca 25149794

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 29       ttgaatgtatcatcaaattca 49
                |||||||||||||||||||||
Sbjct: 30131140 ttgaatgtatcatcaaattca 30131120

>dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0685G12
          Length = 149155

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 29     ttgaatgtatcatcaaattca 49
              |||||||||||||||||||||
Sbjct: 110737 ttgaatgtatcatcaaattca 110717

>dbj|AP004179.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1124_G07
          Length = 93240

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 29   ttgaatgtatcatcaaattca 49
            |||||||||||||||||||||
Sbjct: 3844 ttgaatgtatcatcaaattca 3824

>dbj|AK102019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033080H16, full
            insert sequence
          Length = 2754

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 230  tgttccagattccaacagttccattctgaaaattaca 266
            |||||||||||||| ||||||| |||| ||| |||||
Sbjct: 2690 tgttccagattccagcagttccgttctaaaagttaca 2654

>dbj|AP004466.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09C23, TM0001,
             complete sequence
          Length = 103397

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 200   cacaaggttacaacttacaac 220
             |||||||||||||||||||||
Sbjct: 18231 cacaaggttacaacttacaac 18251

>gb|AF282130.1| Meleagrid herpesvirus 1 unique long region, IRL region, IRS region,
             unique short region, complete sequences and IRS partial
             sequence
          Length = 151102

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    catttatttgaatgtatcat 41
             ||||||||||||||||||||
Sbjct: 22724 catttatttgaatgtatcat 22705

>gb|AC169705.1| Rhesus Macaque  BAC CH250-174C17 (Children's Hospital Oakland Research
              Institute Rhesus macaque Adult Male BAC Library) complete
              sequence
          Length = 181644

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 185    aaatttaaattcacccacaa 204
              ||||||||||||||||||||
Sbjct: 171293 aaatttaaattcacccacaa 171274

>gb|AC125643.3| Rattus norvegicus 4 BAC CH230-55N7 (Children's Hospital Oakland
            Research Institute) complete sequence
          Length = 216677

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 16   caagtccatttatttgaatg 35
            ||||||||||||||||||||
Sbjct: 3117 caagtccatttatttgaatg 3136

>gb|AC154993.9| Mus musculus chromosome 3, clone RP23-246L14, complete sequence
          Length = 208416

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 59    cccagttcccagtttctaggaaat 82
             |||||||||||||| |||||||||
Sbjct: 82374 cccagttcccagttactaggaaat 82397

>emb|AL162212.12| Human DNA sequence from clone RP11-209P2 on chromosome 13 Contains a
             rab9 effector p40 (RAB9P40) pseudogene, complete sequence
          Length = 124418

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 243   aacagttccattctgaaaat 262
             ||||||||||||||||||||
Sbjct: 56442 aacagttccattctgaaaat 56423

>gb|AC099466.7| Rattus norvegicus 4 BAC CH230-63I9 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 227298

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 16     caagtccatttatttgaatg 35
              ||||||||||||||||||||
Sbjct: 100058 caagtccatttatttgaatg 100077

>emb|AL669941.12| Mouse DNA sequence from clone RP23-288B4 on chromosome 11 no genes,
             complete sequence
          Length = 216199

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   aacttacaactggggaattt 230
             ||||||||||||||||||||
Sbjct: 22548 aacttacaactggggaattt 22529

>gb|AC090311.12| Homo sapiens chromosome 18, clone RP11-742D12, complete sequence
          Length = 97882

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   aatgcacacaacagctctaa 186
             ||||||||||||||||||||
Sbjct: 96961 aatgcacacaacagctctaa 96980

>gb|AC064800.8| Homo sapiens chromosome 18, clone CTD-2001I24, complete sequence
          Length = 131409

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   aatgcacacaacagctctaa 186
             ||||||||||||||||||||
Sbjct: 40725 aatgcacacaacagctctaa 40744

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 176     aacagctctaaatttaaatt 195
               ||||||||||||||||||||
Sbjct: 2028326 aacagctctaaatttaaatt 2028345

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 24       tttatttgaatgtatcatca 43
                ||||||||||||||||||||
Sbjct: 20329048 tttatttgaatgtatcatca 20329067

>gb|AF291866.1|AF291866 Meleagrid herpesvirus 1 strain FC126, complete genome
          Length = 159160

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    catttatttgaatgtatcat 41
             ||||||||||||||||||||
Sbjct: 28801 catttatttgaatgtatcat 28782

>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1439_F07
          Length = 153743

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     tttatttgaatgtatcatca 43
              ||||||||||||||||||||
Sbjct: 108175 tttatttgaatgtatcatca 108194

>dbj|AP002856.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-816H13, complete
              sequence
          Length = 227942

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 185    aaatttaaattcacccacaa 204
              ||||||||||||||||||||
Sbjct: 156849 aaatttaaattcacccacaa 156830

>emb|AL662985.3|OSJN00189 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0095H06,
             complete sequence
          Length = 126447

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   aacagctctaaatttaaatt 195
             ||||||||||||||||||||
Sbjct: 44986 aacagctctaaatttaaatt 45005

>gb|AC132312.4| Mus musculus BAC clone RP24-298A20 from 12, complete sequence
          Length = 177464

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 11    tgcatcaagtccatttatttgaat 34
             ||||||| ||||||||||||||||
Sbjct: 77450 tgcatcaggtccatttatttgaat 77473

>emb|CT025734.8| Mouse DNA sequence from clone RP24-375J21 on chromosome 14, complete
              sequence
          Length = 187933

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 230    tgttccagattccaacagtt 249
              ||||||||||||||||||||
Sbjct: 169002 tgttccagattccaacagtt 169021

>gb|DQ273270.1| Allium cepa clone 1G-12-89, complete sequence
          Length = 107859

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 15    tcaagtccatttatttgaatgtat 38
             |||||||||| |||||||||||||
Sbjct: 66014 tcaagtccatatatttgaatgtat 65991


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,888,769
Number of Sequences: 3902068
Number of extensions: 2888769
Number of successful extensions: 56359
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56213
Number of HSP's gapped (non-prelim): 146
length of query: 284
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 262
effective length of database: 17,147,199,772
effective search space: 4492566340264
effective search space used: 4492566340264
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)