>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 78/95 (82%)
 Strand = Plus / Minus

                                                                         
Query: 248   ggacacttggcatccagaaactccttgagcgtgcgggcacccttctggctgcccatcagc 307
             |||||||||||||| ||||| ||||||||| |||| || || |||||  | ||||||| |
Sbjct: 49932 ggacacttggcatcgagaaattccttgagcatgcgtgcccctttctgagtacccatcaac 49873

                                                
Query: 308   tccgctagcctctctaccggtagcagcgcgagctc 342
             || |  |||| ||||||||| ||||| || |||||
Sbjct: 49872 tcagacagccgctctaccggaagcagggccagctc 49838

>gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0079B22, from chromosome 3, complete sequence
          Length = 125217

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 78/95 (82%)
 Strand = Plus / Plus

                                                                         
Query: 248   ggacacttggcatccagaaactccttgagcgtgcgggcacccttctggctgcccatcagc 307
             |||||||||||||| ||||| ||||||||| |||| || || |||||  | ||||||| |
Sbjct: 75286 ggacacttggcatcgagaaattccttgagcatgcgtgcccctttctgagtacccatcaac 75345

                                                
Query: 308   tccgctagcctctctaccggtagcagcgcgagctc 342
             || |  |||| ||||||||| ||||| || |||||
Sbjct: 75346 tcagacagccgctctaccggaagcagggccagctc 75380

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
             complete sequence
          Length = 36192742

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 78/95 (82%)
 Strand = Plus / Minus

                                                                         
Query: 248   ggacacttggcatccagaaactccttgagcgtgcgggcacccttctggctgcccatcagc 307
             |||||||||||||| ||||| ||||||||| |||| || || |||||  | ||||||| |
Sbjct: 49932 ggacacttggcatcgagaaattccttgagcatgcgtgcccctttctgagtacccatcaac 49873

                                                
Query: 308   tccgctagcctctctaccggtagcagcgcgagctc 342
             || |  |||| ||||||||| ||||| || |||||
Sbjct: 49872 tcagacagccgctctaccggaagcagggccagctc 49838

>dbj|AK121880.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033104L13, full
            insert sequence
          Length = 3178

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 78/95 (82%)
 Strand = Plus / Minus

                                                                        
Query: 248  ggacacttggcatccagaaactccttgagcgtgcgggcacccttctggctgcccatcagc 307
            |||||||||||||| ||||| ||||||||| |||| || || |||||  | ||||||| |
Sbjct: 3022 ggacacttggcatcgagaaattccttgagcatgcgtgcccctttctgagtacccatcaac 2963

                                               
Query: 308  tccgctagcctctctaccggtagcagcgcgagctc 342
            || |  |||| ||||||||| ||||| || |||||
Sbjct: 2962 tcagacagccgctctaccggaagcagggccagctc 2928

>dbj|AK068556.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151H20, full
            insert sequence
          Length = 3118

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 78/95 (82%)
 Strand = Plus / Minus

                                                                        
Query: 248  ggacacttggcatccagaaactccttgagcgtgcgggcacccttctggctgcccatcagc 307
            |||||||||||||| ||||| ||||||||| |||| || || |||||  | ||||||| |
Sbjct: 3029 ggacacttggcatcgagaaattccttgagcatgcgtgcccctttctgagtacccatcaac 2970

                                               
Query: 308  tccgctagcctctctaccggtagcagcgcgagctc 342
            || |  |||| ||||||||| ||||| || |||||
Sbjct: 2969 tcagacagccgctctaccggaagcagggccagctc 2935

>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome
          Length = 4202352

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 180    aactcctcttccaagacctca 200
              |||||||||||||||||||||
Sbjct: 780906 aactcctcttccaagacctca 780886

>ref|NM_123675.1| Arabidopsis thaliana RNA binding AT5G43090 mRNA, complete cds
          Length = 1584

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 32   aatcacatatttggcattgg 51
            ||||||||||||||||||||
Sbjct: 1020 aatcacatatttggcattgg 1001

>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0063D09
              map S1559, complete sequence
          Length = 190721

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 331    cagcgcgagctccgccaggc 350
              ||||||||||||||||||||
Sbjct: 136595 cagcgcgagctccgccaggc 136614

>gb|AC122434.2| Mus musculus BAC clone RP24-198G2 from chromosome 8, complete sequence
          Length = 168940

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   ggacacttggcatccagaaa 267
             ||||||||||||||||||||
Sbjct: 32628 ggacacttggcatccagaaa 32647

>emb|AL390059.10| Human DNA sequence from clone RP11-399E10 on chromosome 4, complete
             sequence
          Length = 200379

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 291   tctggctgcccatcagctcc 310
             ||||||||||||||||||||
Sbjct: 23281 tctggctgcccatcagctcc 23262

>emb|BX571876.1|BACPHGLE1 Leptospira biflexa temperate bacteriophage LE1
          Length = 73623

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    ttggatttggatggaattca 67
             ||||||||||||||||||||
Sbjct: 26499 ttggatttggatggaattca 26480

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 331     cagcgcgagctccgccaggc 350
               ||||||||||||||||||||
Sbjct: 3768923 cagcgcgagctccgccaggc 3768942

>dbj|AB008267.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MMG4
          Length = 79046

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    aatcacatatttggcattgg 51
             ||||||||||||||||||||
Sbjct: 42990 aatcacatatttggcattgg 42971

>gb|AC005516.1|AC005516 Homo sapiens Chromosome 4p16.3 BAC clone 399e10 containing Huntington's
             Disease gene; exons 1-67, complete sequence
          Length = 200348

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 291   tctggctgcccatcagctcc 310
             ||||||||||||||||||||
Sbjct: 23285 tctggctgcccatcagctcc 23266

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 331     cagcgcgagctccgccaggc 350
               ||||||||||||||||||||
Sbjct: 3777617 cagcgcgagctccgccaggc 3777636

>emb|Z69837.1|HSL113B6 Human DNA sequence from clone LA04NC01-113B6 on chromosome 4, complete
             sequence
          Length = 39756

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 291   tctggctgcccatcagctcc 310
             ||||||||||||||||||||
Sbjct: 26195 tctggctgcccatcagctcc 26176


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,602,904
Number of Sequences: 3902068
Number of extensions: 2602904
Number of successful extensions: 42651
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42578
Number of HSP's gapped (non-prelim): 73
length of query: 352
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 330
effective length of database: 17,147,199,772
effective search space: 5658575924760
effective search space used: 5658575924760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)