ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl11h10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, co... 628 e-177
2ref|XM_469412.1| Oryza sativa (japonica cultivar-group), mRNA 98 2e-17
3ref|XM_469411.1| Oryza sativa (japonica cultivar-group), mRNA 98 2e-17
4gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosom... 98 2e-17
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 98 2e-17
6gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual posit... 98 2e-17
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 98 2e-17
8dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 2e-17
9dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 2e-17
10dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 2e-17
11dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 2e-17
12gb|AY103567.1| Zea mays PCO116252 mRNA sequence 84 3e-13
13gb|AY111869.1| Zea mays CL452_-8 mRNA sequence 76 8e-11
14gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full ... 64 3e-07
15gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full... 64 3e-07
16gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds 64 3e-07
17gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-... 64 3e-07
18gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, ... 62 1e-06
19gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds 60 4e-06
20gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRN... 56 7e-05
21gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds 56 7e-05
22ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA 54 3e-04
23emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 54 3e-04
24gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genom... 54 3e-04
25dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
26ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.001
27gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genom... 52 0.001
28gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partia... 52 0.001
29gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible l... 52 0.001
30dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
31gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 50 0.004
32emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa... 50 0.004
33gb|AY720897.2| Triticum aestivum lipoxygenase gene, partial sequ... 46 0.068
34gb|DQ428248.1| Sorghum propinquum locus PRC0271 genomic sequence 46 0.068
35gb|DQ428247.1| Sorghum bicolor voucher PI585454 locus PRC0271 ge... 46 0.068
36gb|DQ428246.1| Sorghum bicolor voucher PI267539 locus PRC0271 ge... 46 0.068
37gb|DQ428245.1| Sorghum bicolor voucher PI267408 locus PRC0271 ge... 46 0.068
38gb|DQ428244.1| Sorghum bicolor voucher PI221607 locus PRC0271 ge... 46 0.068
39gb|DQ428243.1| Sorghum bicolor voucher PI152702 locus PRC0271 ge... 46 0.068
40gb|DQ428242.1| Sorghum bicolor voucher NSL92371 locus PRC0271 ge... 46 0.068
41gb|DQ428241.1| Sorghum bicolor voucher NSL87902 locus PRC0271 ge... 46 0.068
42gb|DQ428240.1| Sorghum bicolor voucher NSL87666 locus PRC0271 ge... 46 0.068
43gb|DQ428239.1| Sorghum bicolor voucher NSL77217 locus PRC0271 ge... 46 0.068
44gb|DQ428238.1| Sorghum bicolor voucher NSL77034 locus PRC0271 ge... 46 0.068
45gb|DQ428237.1| Sorghum bicolor voucher NSL55243 locus PRC0271 ge... 46 0.068
46gb|DQ428236.1| Sorghum bicolor voucher NSL51365 locus PRC0271 ge... 46 0.068
47gb|DQ428235.1| Sorghum bicolor voucher NSL51030 locus PRC0271 ge... 46 0.068
48gb|DQ428234.1| Sorghum bicolor voucher BTx623 locus PRC0271 geno... 46 0.068
49ref|XM_483279.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.27
50ref|XM_483276.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.27
51gb|AC109929.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.27
52dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.27
53dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.27
54dbj|AP005816.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.27
55dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.27
56dbj|AK073570.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.27
57dbj|AK066825.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.27
58gb|AF095896.1|AF095896 Oryza sativa lipoxygenase (CM-LOX2) mRNA,... 44 0.27
59gb|AF095895.1|AF095895 Oryza sativa lipoxygenase (CM-LOX1) mRNA,... 44 0.27
60dbj|D14000.1|RICL2OP Oryza sativa (japonica cultivar-group) lox2... 44 0.27
61gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.27
62gb|AC152958.1| Mus musculus 6 BAC RP23-301K21 (Roswell Park Canc... 42 1.1
63ref|XM_464447.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.1
64gb|AC107868.9| Mus musculus chromosome 17, clone RP23-405A17, co... 42 1.1
65gb|AC136525.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.1
66gb|AC124174.4| Mus musculus BAC clone RP23-181O22 from chromosom... 42 1.1
67gb|AC145476.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.1
68gb|AF514331.1| Scyllarus arctus 28S ribosomal RNA gene, partial ... 42 1.1
69dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
70dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
71gb|AC154544.2| Mus musculus BAC clone RP23-228G19 from chromosom... 42 1.1
72dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
73dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
74dbj|AK064795.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
75dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
76dbj|AK060791.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
77emb|AL445074.4|CNS07ECX Human chromosome 14 DNA sequence BAC R-3... 42 1.1
78gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, compl... 40 4.2
79ref|XM_657908.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 4.2
80gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 40 4.2
81emb|AL160154.11| Human DNA sequence from clone RP11-447N10 on ch... 40 4.2
82dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 40 4.2
83gb|AY110522.1| Zea mays CL4677_2 mRNA sequence 40 4.2
84gb|AY104322.1| Zea mays PCO093659 mRNA sequence 40 4.2
85gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 40 4.2
86dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 40 4.2
87gb|CP000036.1| Shigella boydii Sb227, complete genome 40 4.2
88gb|CP000038.1| Shigella sonnei Ss046, complete genome 40 4.2 
>gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, complete cds
          Length = 3003

 Score =  628 bits (317), Expect = e-177
 Identities = 317/317 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    gaaaagaatgcgcacacgagtgcttattcatgcctcattgtcctcaccctatcaacatca 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2993 gaaaagaatgcgcacacgagtgcttattcatgcctcattgtcctcaccctatcaacatca 2934

                                                                        
Query: 61   tctacgacacaatcatcattttccatcatccactaatccctggcaactaattaccgcaac 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2933 tctacgacacaatcatcattttccatcatccactaatccctggcaactaattaccgcaac 2874

                                                                        
Query: 121  cacccagaagccaatgaaaagtaacacaatacaccttgcgagacacgaaccgatccatga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2873 cacccagaagccaatgaaaagtaacacaatacaccttgcgagacacgaaccgatccatga 2814

                                                                        
Query: 181  ccagcggacggacgactaccgaaagaaggaaacaaagaccatgctcagctcagatggaga 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2813 ccagcggacggacgactaccgaaagaaggaaacaaagaccatgctcagctcagatggaga 2754

                                                                        
Query: 241  cgctgttggggatgcccatggcggtgagccccagcgccttctccccgttggcgtccgacg 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2753 cgctgttggggatgcccatggcggtgagccccagcgccttctccccgttggcgtccgacg 2694

                             
Query: 301  tgttggggtacagcagc 317
            |||||||||||||||||
Sbjct: 2693 tgttggggtacagcagc 2677
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>ref|XM_469412.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2686

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                        
Query: 229  ctcagatggagacgctgttggggatgcccatggcggtgagccccagcgccttctccccgt 288
            |||||||||||| ||||||||||||||||||||||||||||||  |  ||||||||  | 
Sbjct: 2447 ctcagatggagatgctgttggggatgcccatggcggtgagcccttggcccttctccttgg 2388

                                         
Query: 289  tggcgtccgacgtgttggggtacagcagc 317
            || | ||||||||||||||||||||||||
Sbjct: 2387 tgacatccgacgtgttggggtacagcagc 2359
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>ref|XM_469411.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3165

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                        
Query: 229  ctcagatggagacgctgttggggatgcccatggcggtgagccccagcgccttctccccgt 288
            |||||||||||| ||||||||||||||||||||||||||||||  |  ||||||||  | 
Sbjct: 2926 ctcagatggagatgctgttggggatgcccatggcggtgagcccttggcccttctccttgg 2867

                                         
Query: 289  tggcgtccgacgtgttggggtacagcagc 317
            || | ||||||||||||||||||||||||
Sbjct: 2866 tgacatccgacgtgttggggtacagcagc 2838
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>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                         
Query: 229   ctcagatggagacgctgttggggatgcccatggcggtgagccccagcgccttctccccgt 288
             |||||||||||| ||||||||||||||||||||||||||||||  |  ||||||||  | 
Sbjct: 65817 ctcagatggagatgctgttggggatgcccatggcggtgagcccttggcccttctccttgg 65758

                                          
Query: 289   tggcgtccgacgtgttggggtacagcagc 317
             || | ||||||||||||||||||||||||
Sbjct: 65757 tgacatccgacgtgttggggtacagcagc 65729



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 230   tcagatggagacgctgttggggatgcccatggcggtga 267
             |||||| |||| |||||||||||||||| |||||||||
Sbjct: 47237 tcagatcgagatgctgttggggatgcccttggcggtga 47200
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                            
Query: 229      ctcagatggagacgctgttggggatgcccatggcggtgagccccagcgccttctccccgt 288
                |||||||||||| ||||||||||||||||||||||||||||||  |  ||||||||  | 
Sbjct: 27821687 ctcagatggagatgctgttggggatgcccatggcggtgagcccttggcccttctccttgg 27821628

                                             
Query: 289      tggcgtccgacgtgttggggtacagcagc 317
                || | ||||||||||||||||||||||||
Sbjct: 27821627 tgacatccgacgtgttggggtacagcagc 27821599



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                   
Query: 230      tcagatggagacgctgttggggatgcccatggcgg 264
                ||||||||||| |||||||||||||||| ||||||
Sbjct: 30026449 tcagatggagatgctgttggggatgcccctggcgg 30026415



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                      
Query: 230      tcagatggagacgctgttggggatgcccatggcggtga 267
                |||||| |||| |||||||||||||||| |||||||||
Sbjct: 27803107 tcagatcgagatgctgttggggatgcccttggcggtga 27803070
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>gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual positional specificity
            lipoxygenase mRNA, complete cds
          Length = 3154

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                        
Query: 229  ctcagatggagacgctgttggggatgcccatggcggtgagccccagcgccttctccccgt 288
            |||||||||||| ||||||||||||||||||||||||||||||  |  ||||||||  | 
Sbjct: 2920 ctcagatggagatgctgttggggatgcccatggcggtgagcccttggcccttctccttgg 2861

                                         
Query: 289  tggcgtccgacgtgttggggtacagcagc 317
            || | ||||||||||||||||||||||||
Sbjct: 2860 tgacatccgacgtgttggggtacagcagc 2832
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                            
Query: 229      ctcagatggagacgctgttggggatgcccatggcggtgagccccagcgccttctccccgt 288
                |||||||||||| ||||||||||||||||||||||||||||||  |  ||||||||  | 
Sbjct: 27913011 ctcagatggagatgctgttggggatgcccatggcggtgagcccttggcccttctccttgg 27912952

                                             
Query: 289      tggcgtccgacgtgttggggtacagcagc 317
                || | ||||||||||||||||||||||||
Sbjct: 27912951 tgacatccgacgtgttggggtacagcagc 27912923



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                   
Query: 230      tcagatggagacgctgttggggatgcccatggcgg 264
                ||||||||||| |||||||||||||||| ||||||
Sbjct: 30117871 tcagatggagatgctgttggggatgcccctggcgg 30117837



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                      
Query: 230      tcagatggagacgctgttggggatgcccatggcggtga 267
                |||||| |||| |||||||||||||||| |||||||||
Sbjct: 27894431 tcagatcgagatgctgttggggatgcccttggcggtga 27894394
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>dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H08, full
            insert sequence
          Length = 1560

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                        
Query: 229  ctcagatggagacgctgttggggatgcccatggcggtgagccccagcgccttctccccgt 288
            |||||||||||| ||||||||||||||||||||||||||||||  |  ||||||||  | 
Sbjct: 1333 ctcagatggagatgctgttggggatgcccatggcggtgagcccttggcccttctccttgg 1274

                                         
Query: 289  tggcgtccgacgtgttggggtacagcagc 317
            || | ||||||||||||||||||||||||
Sbjct: 1273 tgacatccgacgtgttggggtacagcagc 1245
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>dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O17, full
            insert sequence
          Length = 2851

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                        
Query: 229  ctcagatggagacgctgttggggatgcccatggcggtgagccccagcgccttctccccgt 288
            |||||||||||| ||||||||||||||||||||||||||||||  |  ||||||||  | 
Sbjct: 2598 ctcagatggagatgctgttggggatgcccatggcggtgagcccttggcccttctccttgg 2539

                                         
Query: 289  tggcgtccgacgtgttggggtacagcagc 317
            || | ||||||||||||||||||||||||
Sbjct: 2538 tgacatccgacgtgttggggtacagcagc 2510
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>dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H13, full
            insert sequence
          Length = 3167

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                        
Query: 229  ctcagatggagacgctgttggggatgcccatggcggtgagccccagcgccttctccccgt 288
            |||||||||||| ||||||||||||||||||||||||||||||  |  ||||||||  | 
Sbjct: 2928 ctcagatggagatgctgttggggatgcccatggcggtgagcccttggcccttctccttgg 2869

                                         
Query: 289  tggcgtccgacgtgttggggtacagcagc 317
            || | ||||||||||||||||||||||||
Sbjct: 2868 tgacatccgacgtgttggggtacagcagc 2840
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>dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079P11, full
            insert sequence
          Length = 1726

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                        
Query: 229  ctcagatggagacgctgttggggatgcccatggcggtgagccccagcgccttctccccgt 288
            |||||||||||| ||||||||||||||||||||||||||||||  |  ||||||||  | 
Sbjct: 1498 ctcagatggagatgctgttggggatgcccatggcggtgagcccttggcccttctccttgg 1439

                                         
Query: 289  tggcgtccgacgtgttggggtacagcagc 317
            || | ||||||||||||||||||||||||
Sbjct: 1438 tgacatccgacgtgttggggtacagcagc 1410
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>gb|AY103567.1| Zea mays PCO116252 mRNA sequence
          Length = 3135

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                        
Query: 228  gctcagatggagacgctgttggggatgcccatggcggtgagccccagcgccttctccccg 287
            ||||| ||||||| ||||||||| ||||||||||| || ||||||   |||||||| |||
Sbjct: 2902 gctcatatggagatgctgttgggaatgcccatggcagtaagcccctcggccttctcgccg 2843

                                          
Query: 288  ttggcgtccgacgtgttggggtacagcagc 317
             |  ||||||||||||||||||||||||||
Sbjct: 2842 gtaacgtccgacgtgttggggtacagcagc 2813
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>gb|AY111869.1| Zea mays CL452_-8 mRNA sequence
          Length = 568

 Score = 75.8 bits (38), Expect = 8e-11
 Identities = 77/90 (85%)
 Strand = Plus / Minus

                                                                       
Query: 228 gctcagatggagacgctgttggggatgcccatggcggtgagccccagcgccttctccccg 287
           ||||| ||||||| ||||||||| ||||||||||| |||||||||    ||||||| |||
Sbjct: 369 gctcatatggagatgctgttgggaatgcccatggcagtgagcccctcgcccttctcgccg 310

                                         
Query: 288 ttggcgtccgacgtgttggggtacagcagc 317
            || | |||||||||||||| |||||||||
Sbjct: 309 gtgacatccgacgtgttgggatacagcagc 280
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>gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full insert mRNA
           sequence
          Length = 1129

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 229 ctcagatggagacgctgttggggatgcccatggcggtgagcccc 272
           |||||||||||| |||||||||||||||| |||| |||||||||
Sbjct: 907 ctcagatggagatgctgttggggatgcccctggccgtgagcccc 864
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>gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full insert mRNA
           sequence
          Length = 1020

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 228 gctcagatggagacgctgttggggatgcccatggcggtgagccc 271
           ||||||||||||| |||||||||||||||| | |||||||||||
Sbjct: 755 gctcagatggagatgctgttggggatgcccttagcggtgagccc 712
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>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds
          Length = 5013

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                        
Query: 228  gctcagatggagacgctgttggggatgcccatggcggtgagccc 271
            ||||||||||||| |||||||||||||||| |||| ||||||||
Sbjct: 4664 gctcagatggagatgctgttggggatgcccttggcagtgagccc 4621
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>gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-L2 allele, partial cds
          Length = 2267

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                        
Query: 228  gctcagatggagacgctgttggggatgcccatggcggtgagccc 271
            ||||||||||||| |||||||||||||||| |||| ||||||||
Sbjct: 2066 gctcagatggagatgctgttggggatgcccttggcagtgagccc 2023
to top
>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds
          Length = 2910

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                               
Query: 222  tgctcagctcagatggagacgctgttggggatgcccatggcggtgagcccc 272
            ||||||| ||||||||| | |||||| ||||||||| ||||||||||||||
Sbjct: 2666 tgctcagatcagatggatatgctgttcgggatgcccctggcggtgagcccc 2616
to top
>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds
          Length = 2595

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 230  tcagatggagacgctgttggggatgcccatggcggtgagccc 271
            ||||||||||| |||||||||||||||| |||| ||||||||
Sbjct: 2595 tcagatggagatgctgttggggatgcccttggcagtgagccc 2554
to top
>gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRNA, partial cds
          Length = 1331

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 232  agatggagacgctgttggggatgcccatggcggtgagccc 271
            ||||||||| |||||||||||||||| ||||||| |||||
Sbjct: 1084 agatggagatgctgttggggatgcccttggcggtaagccc 1045
to top
>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds
          Length = 2818

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 232  agatggagacgctgttggggatgcccatggcggtgagccc 271
            ||||||||| |||||||||||||||| ||||||| |||||
Sbjct: 2655 agatggagatgctgttggggatgcccttggcggtaagccc 2616
to top
>ref|XM_469655.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2613

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 230  tcagatggagacgctgttggggatgcccatggcgg 264
            ||||||||||| |||||||||||||||| ||||||
Sbjct: 2613 tcagatggagatgctgttggggatgcccctggcgg 2579
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>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2
          Length = 2830

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 230  tcagatggagacgctgttggggatgcccatggcgg 264
            ||||||||||| |||||||||||||||| ||||||
Sbjct: 2695 tcagatggagatgctgttggggatgcccctggcgg 2661
to top
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete
             sequence
          Length = 155106

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 230   tcagatggagacgctgttggggatgcccatggcgg 264
             ||||||||||| |||||||||||||||| ||||||
Sbjct: 81302 tcagatggagatgctgttggggatgcccctggcgg 81336
to top
>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full
            insert sequence
          Length = 2928

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 230  tcagatggagacgctgttggggatgcccatggcgg 264
            ||||||||||| |||||||||||||||| ||||||
Sbjct: 2728 tcagatggagatgctgttggggatgcccctggcgg 2694
to top
>ref|XM_469409.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2601

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 230  tcagatggagacgctgttggggatgcccatggcggtga 267
            |||||| |||| |||||||||||||||| |||||||||
Sbjct: 2601 tcagatcgagatgctgttggggatgcccttggcggtga 2564
to top
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete
             sequence
          Length = 119329

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 230   tcagatggagacgctgttggggatgcccatggcggtga 267
             |||||| |||| |||||||||||||||| |||||||||
Sbjct: 10786 tcagatcgagatgctgttggggatgcccttggcggtga 10823
to top
>gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partial cds
          Length = 1814

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 230  tcagatggagacgctgttggggatgcccatggcggtga 267
            ||||||||||| |||||||||||||||| |||| ||||
Sbjct: 1556 tcagatggagatgctgttggggatgcccttggctgtga 1519
to top
>gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible lipoxygenase 2 mRNA,
            complete cds
          Length = 3054

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 226  cagctcagatggagacgctgttggggatgcccat 259
            ||||||| ||||||| ||||||||||||||||||
Sbjct: 2920 cagctcaaatggagatgctgttggggatgcccat 2887
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                 
Query: 227      agctcagatggagacgctgttggggatgcccat 259
                |||||| ||||||| ||||||||||||||||||
Sbjct: 22970463 agctcaaatggagatgctgttggggatgcccat 22970431
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                 
Query: 227      agctcagatggagacgctgttggggatgcccat 259
                |||||| ||||||| ||||||||||||||||||
Sbjct: 22898654 agctcaaatggagatgctgttggggatgcccat 22898622
to top
>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 155568

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 227   agctcagatggagacgctgttggggatgcccat 259
             |||||| ||||||| ||||||||||||||||||
Sbjct: 79740 agctcaaatggagatgctgttggggatgcccat 79708
to top
>gb|AY720897.2| Triticum aestivum lipoxygenase gene, partial sequence
          Length = 934

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 242 gctgttggggatgcccatggcggtgag 268
           |||||||||||||||| ||||||||||
Sbjct: 3   gctgttggggatgcccttggcggtgag 29
to top
>gb|DQ428248.1| Sorghum propinquum locus PRC0271 genomic sequence
          Length = 810

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 229 ctcagatggagacgctgttggggatgcccatggcggtga 267
           |||||||||||| |||||| || |||||| |||||||||
Sbjct: 797 ctcagatggagatgctgtttggaatgcccttggcggtga 759
to top
>gb|DQ428247.1| Sorghum bicolor voucher PI585454 locus PRC0271 genomic sequence
          Length = 805

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 229 ctcagatggagacgctgttggggatgcccatggcggtga 267
           |||||||||||| |||||| || |||||| |||||||||
Sbjct: 792 ctcagatggagatgctgtttggaatgcccttggcggtga 754
to top
>gb|DQ428246.1| Sorghum bicolor voucher PI267539 locus PRC0271 genomic sequence
          Length = 805

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 229 ctcagatggagacgctgttggggatgcccatggcggtga 267
           |||||||||||| |||||| || |||||| |||||||||
Sbjct: 792 ctcagatggagatgctgtttggaatgcccttggcggtga 754
to top
>gb|DQ428245.1| Sorghum bicolor voucher PI267408 locus PRC0271 genomic sequence
          Length = 805

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 229 ctcagatggagacgctgttggggatgcccatggcggtga 267
           |||||||||||| |||||| || |||||| |||||||||
Sbjct: 792 ctcagatggagatgctgtttggaatgcccttggcggtga 754
to top
>gb|DQ428244.1| Sorghum bicolor voucher PI221607 locus PRC0271 genomic sequence
          Length = 805

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 229 ctcagatggagacgctgttggggatgcccatggcggtga 267
           |||||||||||| |||||| || |||||| |||||||||
Sbjct: 792 ctcagatggagatgctgtttggaatgcccttggcggtga 754
to top
>gb|DQ428243.1| Sorghum bicolor voucher PI152702 locus PRC0271 genomic sequence
          Length = 805

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 229 ctcagatggagacgctgttggggatgcccatggcggtga 267
           |||||||||||| |||||| || |||||| |||||||||
Sbjct: 792 ctcagatggagatgctgtttggaatgcccttggcggtga 754
to top
>gb|DQ428242.1| Sorghum bicolor voucher NSL92371 locus PRC0271 genomic sequence
          Length = 805

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 229 ctcagatggagacgctgttggggatgcccatggcggtga 267
           |||||||||||| |||||| || |||||| |||||||||
Sbjct: 792 ctcagatggagatgctgtttggaatgcccttggcggtga 754
to top
>gb|DQ428241.1| Sorghum bicolor voucher NSL87902 locus PRC0271 genomic sequence
          Length = 805

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 229 ctcagatggagacgctgttggggatgcccatggcggtga 267
           |||||||||||| |||||| || |||||| |||||||||
Sbjct: 792 ctcagatggagatgctgtttggaatgcccttggcggtga 754
to top
>gb|DQ428240.1| Sorghum bicolor voucher NSL87666 locus PRC0271 genomic sequence
          Length = 805

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 229 ctcagatggagacgctgttggggatgcccatggcggtga 267
           |||||||||||| |||||| || |||||| |||||||||
Sbjct: 792 ctcagatggagatgctgtttggaatgcccttggcggtga 754
to top
>gb|DQ428239.1| Sorghum bicolor voucher NSL77217 locus PRC0271 genomic sequence
          Length = 805

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 229 ctcagatggagacgctgttggggatgcccatggcggtga 267
           |||||||||||| |||||| || |||||| |||||||||
Sbjct: 792 ctcagatggagatgctgtttggaatgcccttggcggtga 754
to top
>gb|DQ428238.1| Sorghum bicolor voucher NSL77034 locus PRC0271 genomic sequence
          Length = 805

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 229 ctcagatggagacgctgttggggatgcccatggcggtga 267
           |||||||||||| |||||| || |||||| |||||||||
Sbjct: 792 ctcagatggagatgctgtttggaatgcccttggcggtga 754
to top
>gb|DQ428237.1| Sorghum bicolor voucher NSL55243 locus PRC0271 genomic sequence
          Length = 805

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 229 ctcagatggagacgctgttggggatgcccatggcggtga 267
           |||||||||||| |||||| || |||||| |||||||||
Sbjct: 792 ctcagatggagatgctgtttggaatgcccttggcggtga 754
to top
>gb|DQ428236.1| Sorghum bicolor voucher NSL51365 locus PRC0271 genomic sequence
          Length = 805

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 229 ctcagatggagacgctgttggggatgcccatggcggtga 267
           |||||||||||| |||||| || |||||| |||||||||
Sbjct: 792 ctcagatggagatgctgtttggaatgcccttggcggtga 754
to top
>gb|DQ428235.1| Sorghum bicolor voucher NSL51030 locus PRC0271 genomic sequence
          Length = 805

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 229 ctcagatggagacgctgttggggatgcccatggcggtga 267
           |||||||||||| |||||| || |||||| |||||||||
Sbjct: 792 ctcagatggagatgctgtttggaatgcccttggcggtga 754
to top
>gb|DQ428234.1| Sorghum bicolor voucher BTx623 locus PRC0271 genomic sequence
          Length = 805

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 229 ctcagatggagacgctgttggggatgcccatggcggtga 267
           |||||||||||| |||||| || |||||| |||||||||
Sbjct: 792 ctcagatggagatgctgtttggaatgcccttggcggtga 754
to top
>ref|XM_483279.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3198

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 242  gctgttggggatgcccatggcggtga 267
            ||||||||||||||||||| ||||||
Sbjct: 2965 gctgttggggatgcccatgccggtga 2940
to top
>ref|XM_483276.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2775

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 242  gctgttggggatgcccatggcggtga 267
            ||||||||||||||||||| ||||||
Sbjct: 2763 gctgttggggatgcccatgccggtga 2738
to top
>gb|AC109929.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0093J03, complete sequence
          Length = 200626

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 230    tcagatggagacgctgttggggatgcccatggcggtga 267
              |||||||||  ||||||||||||||||| || ||||||
Sbjct: 137487 tcagatggaagcgctgttggggatgcccttgccggtga 137450
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 230      tcagatggagacgctgttggggatgcccatggcggtga 267
                |||||||||  ||||||||||||||||| || ||||||
Sbjct: 20830426 tcagatggaagcgctgttggggatgcccttgccggtga 20830389
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 242      gctgttggggatgcccatggcggtga 267
                ||||||||||||||||||| ||||||
Sbjct: 25242563 gctgttggggatgcccatgccggtga 25242538



 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 242      gctgttggggatgcccatggcggtga 267
                ||||||||||||||||||| ||||||
Sbjct: 25209466 gctgttggggatgcccatgccggtga 25209491
to top
>dbj|AP005816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1168A08
          Length = 138135

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 242    gctgttggggatgcccatggcggtga 267
              ||||||||||||||||||| ||||||
Sbjct: 107686 gctgttggggatgcccatgccggtga 107661



 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 242   gctgttggggatgcccatggcggtga 267
             ||||||||||||||||||| ||||||
Sbjct: 74589 gctgttggggatgcccatgccggtga 74614
to top
>dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0016N23
          Length = 147336

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 242   gctgttggggatgcccatggcggtga 267
             ||||||||||||||||||| ||||||
Sbjct: 17748 gctgttggggatgcccatgccggtga 17723
to top
>dbj|AK073570.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046P13, full
            insert sequence
          Length = 3010

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 230  tcagatggagacgctgttggggatgcccatggcggtga 267
            |||||||||  ||||||||||||||||| || ||||||
Sbjct: 2693 tcagatggaagcgctgttggggatgcccttgccggtga 2656
to top
>dbj|AK066825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075A10, full
            insert sequence
          Length = 3196

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 242  gctgttggggatgcccatggcggtga 267
            ||||||||||||||||||| ||||||
Sbjct: 2963 gctgttggggatgcccatgccggtga 2938
to top
>gb|AF095896.1|AF095896 Oryza sativa lipoxygenase (CM-LOX2) mRNA, partial cds
          Length = 2232

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 242  gctgttggggatgcccatggcggtga 267
            ||||||||||||||||||| ||||||
Sbjct: 2040 gctgttggggatgcccatgccggtga 2015
to top
>gb|AF095895.1|AF095895 Oryza sativa lipoxygenase (CM-LOX1) mRNA, partial cds
          Length = 2664

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 242  gctgttggggatgcccatggcggtga 267
            ||||||||||||||||||| ||||||
Sbjct: 2448 gctgttggggatgcccatgccggtga 2423
to top
>dbj|D14000.1|RICL2OP Oryza sativa (japonica cultivar-group) lox2osPil mRNA for
            lipoxygenase, complete cds
          Length = 3007

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 242  gctgttggggatgcccatggcggtga 267
            ||||||||||||||||||| ||||||
Sbjct: 2878 gctgttggggatgcccatgccggtga 2853
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 230      tcagatggagacgctgttggggatgcccatggcggtga 267
                |||||||||  ||||||||||||||||| || ||||||
Sbjct: 21140661 tcagatggaagcgctgttggggatgcccttgccggtga 21140624
to top
>gb|AC152958.1| Mus musculus 6 BAC RP23-301K21 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 182995

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 120    ccacccagaagccaatgaaaa 140
              |||||||||||||||||||||
Sbjct: 111481 ccacccagaagccaatgaaaa 111461
to top
>ref|XM_464447.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3123

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 229  ctcagatggagacgctgttggggatgccc 257
            |||||||||||| |||||| |||||||||
Sbjct: 2882 ctcagatggagatgctgtttgggatgccc 2854
to top
>gb|AC107868.9| Mus musculus chromosome 17, clone RP23-405A17, complete sequence
          Length = 193624

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 118  aaccacccagaagccaatgaaaagt 142
            |||||||||| ||||||||||||||
Sbjct: 6038 aaccacccagcagccaatgaaaagt 6014
to top
>gb|AC136525.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0585E02,
             complete sequence
          Length = 138677

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 230   tcagatggagacgctgttggg 250
             |||||||||||||||||||||
Sbjct: 35941 tcagatggagacgctgttggg 35921
to top
>gb|AC124174.4| Mus musculus BAC clone RP23-181O22 from chromosome 3, complete sequence
          Length = 197553

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 120    ccacccagaagccaatgaaaa 140
              |||||||||||||||||||||
Sbjct: 163213 ccacccagaagccaatgaaaa 163193
to top
>gb|AC145476.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1023E01,
             complete sequence
          Length = 140322

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 230   tcagatggagacgctgttggg 250
             |||||||||||||||||||||
Sbjct: 62714 tcagatggagacgctgttggg 62694
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>gb|AF514331.1| Scyllarus arctus 28S ribosomal RNA gene, partial sequence
          Length = 475

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 90  ccactaatccctggcaactaattac 114
           ||||||||||||||||||| |||||
Sbjct: 431 ccactaatccctggcaactgattac 455
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 230      tcagatggagacgctgttggg 250
                |||||||||||||||||||||
Sbjct: 13606806 tcagatggagacgctgttggg 13606786
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 229     ctcagatggagacgctgttggggatgccc 257
               |||||||||||| |||||| |||||||||
Sbjct: 5276962 ctcagatggagatgctgtttgggatgccc 5276990
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>gb|AC154544.2| Mus musculus BAC clone RP23-228G19 from chromosome 17, complete sequence
          Length = 183626

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 118    aaccacccagaagccaatgaaaagt 142
              |||||||||| ||||||||||||||
Sbjct: 147032 aaccacccagcagccaatgaaaagt 147008
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>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1225_F07
          Length = 142772

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 229  ctcagatggagacgctgttggggatgccc 257
            |||||||||||| |||||| |||||||||
Sbjct: 3265 ctcagatggagatgctgtttgggatgccc 3293
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>dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074B03, full
            insert sequence
          Length = 3160

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 229  ctcagatggagacgctgttggggatgccc 257
            |||||||||||| |||||| |||||||||
Sbjct: 2881 ctcagatggagatgctgtttgggatgccc 2853
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>dbj|AK064795.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000C19, full
            insert sequence
          Length = 3008

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 230  tcagatggagacgctgttggg 250
            |||||||||||||||||||||
Sbjct: 2799 tcagatggagacgctgttggg 2779
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>dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-B01, full
            insert sequence
          Length = 2250

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 229  ctcagatggagacgctgttggggatgccc 257
            |||||||||||| |||||| |||||||||
Sbjct: 2043 ctcagatggagatgctgtttgggatgccc 2015
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>dbj|AK060791.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-E01, full
            insert sequence
          Length = 2282

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 230  tcagatggagacgctgttggg 250
            |||||||||||||||||||||
Sbjct: 2098 tcagatggagacgctgttggg 2078
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>emb|AL445074.4|CNS07ECX Human chromosome 14 DNA sequence BAC R-313C4 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 144538

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 81   ttccatcatccactaatccctggcaacta 109
            |||||||  ||||||||||||||||||||
Sbjct: 2646 ttccatctcccactaatccctggcaacta 2674
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>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome
          Length = 943016

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 174    tccatgaccagcggacggac 193
              ||||||||||||||||||||
Sbjct: 181139 tccatgaccagcggacggac 181120
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>ref|XM_657908.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5396.2), mRNA
          Length = 555

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 290 ggcgtccgacgtgttggggt 309
           ||||||||||||||||||||
Sbjct: 102 ggcgtccgacgtgttggggt 83
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>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 51      atcaacatcatctacgacac 70
               ||||||||||||||||||||
Sbjct: 1401984 atcaacatcatctacgacac 1402003
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>emb|AL160154.11| Human DNA sequence from clone RP11-447N10 on chromosome 13 Contains a
             CpG island, complete sequence
          Length = 157379

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    atccctggcaactaattacc 115
             ||||||||||||||||||||
Sbjct: 53547 atccctggcaactaattacc 53528
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>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 51      atcaacatcatctacgacac 70
               ||||||||||||||||||||
Sbjct: 1405674 atcaacatcatctacgacac 1405693
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>gb|AY110522.1| Zea mays CL4677_2 mRNA sequence
          Length = 1304

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 230 tcagatggagacgctgttggggatgccc 257
           ||||||||||| |||| |||||||||||
Sbjct: 134 tcagatggagatgctgctggggatgccc 161
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>gb|AY104322.1| Zea mays PCO093659 mRNA sequence
          Length = 1439

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 230  tcagatggagacgctgttggggatgccc 257
            ||||||||||| |||| |||||||||||
Sbjct: 1214 tcagatggagatgctgctggggatgccc 1187
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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 51      atcaacatcatctacgacac 70
               ||||||||||||||||||||
Sbjct: 2173734 atcaacatcatctacgacac 2173715
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>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 51      atcaacatcatctacgacac 70
               ||||||||||||||||||||
Sbjct: 1913432 atcaacatcatctacgacac 1913451
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>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 51      atcaacatcatctacgacac 70
               ||||||||||||||||||||
Sbjct: 1705633 atcaacatcatctacgacac 1705614
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>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 51      atcaacatcatctacgacac 70
               ||||||||||||||||||||
Sbjct: 1891170 atcaacatcatctacgacac 1891151


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,467,642
Number of Sequences: 3902068
Number of extensions: 2467642
Number of successful extensions: 56403
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55959
Number of HSP's gapped (non-prelim): 433
length of query: 317
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 295
effective length of database: 17,147,199,772
effective search space: 5058423932740
effective search space used: 5058423932740
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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